The RenderingVolumeOpenGL2 module was in the Rendering group,
but not RenderingContextOpenGL2 or DomainsChemistryOpenGL2.
As a result, the latter two modules were not part of the
default build, even though they implement the backends for
modules that are part of the default build (DomainsChemistry,
RenderingContext2D, Charts, etc).

The fact that the VTK Python wheels provided modules without
backends has caused trouble for several users.

The RenderingOpenGL2 module itself was not part of the Rendering
group, either, but seems to have been brought in as a dependency
of RenderingVolumeOpenGL2.

There were logical errors in the computation of the Bounds from
the parts of the axes. The original code made two incorrect
assumptions: 1) that the upper bound was never negative, and
2) that the upper bound was always farther from the origin than
the lower bound.

Fix vtkDICOMReader tilted-gantry PatientMatrix for BottomUp.
This is required in order for vtkDICOMCTRectifer to work when
the reader uses "BottomUp" row order (which is the default).

This fixes a potential infinite loop while parsing files that
end in garbage, and updates the DICOM dictionary to 2020e.

JackGuyver authored 3 years ago and David Gobbi committed 3 years ago

Based on the discussion within the merge request !7880 the possibility
to convert a numpy array containing single characters of any type has
been removed without replacement, since these arrays have no appropriate
counterpart in VTK.
For more information see:
vtk/vtk!7880

JackGuyver authored 3 years ago and David Gobbi committed 3 years ago

Numpy VTK array conversion contains the the type numpy.character, which
is deprecated since NumPy version 1.19
See: https://numpy.org/doc/stable/reference/arrays.dtypes.html
section Generic types.

Ben Boeckel authored 3 years ago and Kitware Robot committed 3 years ago

06fb754e Merge topic 'ci-properly-tagged-wheels' into backport-missed-mrs-9.0.2
a19895c2 Merge topic 'minimize-wheel-size' into backport-missed-mrs-9.0.2
6ccb2b79 gitlab-ci: use the audited wheels on Linux
ae5bcb1a Merge topic 'ci-macos-arm64-wheel' into backport-missed-mrs-9.0.2
710b8895 wheel: reduce the size of Linux and macOS wheels
6efec1cd gitlab-ci: enable macOS arm64 wheels again

Acked-by: Kitware Robot <kwrobot@kitware.com>
Merge-request: !8070

Merge-request: !8065

Merge-request: !8062

(cherry picked from commit fc8cd99c)

Merge-request: !8050

Wheels make copies of files instead of storing symlinks. Drop the
information in wheels to save space since they're not really reusable as
SDKs anyways.

(cherry picked from commit dfe5b509)

The _PYTHON_HOST_PLATFORM variable should avoid universal2 assumptions.

(cherry picked from commit 2f22c897)

Ben Boeckel authored 3 years ago and Kitware Robot committed 3 years ago

36dc6577 ci: force Python3 for wheels in CI
c002bd30 gitlab-ci: backport wheel build jobs from master
aff6b008 wheel: add the required rpath entry for wheels
2412480a vtkWheelPreparation: silence legacy messages
2c610e45 vtkWheelPreparation: fix library destinations for wheels
974b207b setup.py: fix canonical issue URL
4806f36f setup.py: fix macOS library inclusion
610224b5 setup.py: add `vtkmodules.web` if the web feature is available
...

Acked-by: Kitware Robot <kwrobot@kitware.com>
Merge-request: !8045

Everything not related to wheels has been stripped out.

The wheel infrastructure assumes this is the case.

Chuck Atkins authored 3 years ago and Kitware Robot committed 3 years ago

f727b8e7 vtkmpi: Expand no-cpp defines to cover SGI MPT

Acked-by: Kitware Robot <kwrobot@kitware.com>
Acked-by: Ben Boeckel <ben.boeckel@kitware.com>
Merge-request: !7891

Ben Boeckel authored 3 years ago and Kitware Robot committed 3 years ago

61e81bb2 Merge branch 'upstream-hdf5' into HEAD
6deba064 hdf5 2021-02-24 (3f65de94)
f1de83f6 Bumped hdf5 to for/vtk-20210227-1.10.6 tag

Acked-by: Kitware Robot <kwrobot@kitware.com>
Acked-by: Ben Boeckel <ben.boeckel@kitware.com>
Merge-request: !7698

# By HDF Upstream
* upstream-hdf5:
  hdf5 2021-02-24 (3f65de94)

Kitware Robot authored 4 years ago and Ben Boeckel committed 3 years ago

Code extracted from:

    https://gitlab.kitware.com/third-party/hdf5.git

at commit 3f65de9445b8712ed5b0440d652414a61bf0bb56 (for/vtk-20210227-1.10.6).

Sean McBride authored 4 years ago and Kitware Robot committed 4 years ago

86b1c9de Fixed cmake 3.20rc3 CMP0115 warning

Acked-by: Kitware Robot <kwrobot@kitware.com>
Acked-by: Ben Boeckel <ben.boeckel@kitware.com>
Merge-request: !7729

Just fully specify a filename, with extension.

Increased from for/vtk-20200818-1.10.6 tag.

Notably this will allow building as Universal Binary on macOS.

Sean McBride authored 4 years ago and Kitware Robot committed 4 years ago

8c9edd68 vtkPSystemTools: Fix GetCurrentWorkingDirectory for KWSys change

Acked-by: Kitware Robot <kwrobot@kitware.com>
Acked-by: Ben Boeckel <ben.boeckel@kitware.com>
Merge-request: !7710

KWSys no longer offers the `collapse` argument. Just removed it.

This is backported from 9518a984 from master.

Cory Quammen authored 4 years ago and Kitware Robot committed 4 years ago

d747f524 For unstructured grids, enable point merging when requested

Acked-by: Kitware Robot <kwrobot@kitware.com>
Acked-by: Mathieu Westphal <mathieu.westphal@kitware.com>
Merge-request: !7660

For vtkCutter, point merging is not an explicit option. It is enabled
by setting a vtkPointLocator that merges points. However, if a
vtkNonMergingPointLocator is set as the point locator, then points
will not be merged. Pass along the inferred merging option to
vtk3DLinearGridPlaneCutter when execution is deferred to it.

(cherry picked from commit cbdb93fc)