- Removed unused extent translator subclasses
- Removed unnecessary refereces to the extent translator
- Moved extent translator into Common/ExecutionModel

Change-Id: Idc53dd66891297b1f6a06ea3eb1baf394cb24b20

It made more sense to have both CAN_PRODUCE_SUB_EXTENT and
CAN_HANDLE_PIECE_REQUEST in vtkAlgorithm.

Change-Id: Ie64bb3e7c8417113bfb7f677c10d8feb5fdddc39

Change-Id: Id76d3bc545a64675a0820cb1d9b45c61a51efc6a

Change-Id: I24bf3b0959bf6e22543bb526b26d9fda14ab4c20

The XML readers and writers, both parallel and serial, now work
with the pipeline changes. Now, all writers work with pieces
even though the structured ones can handle asking for a sub-
extent.

Change-Id: I9f757ba12a3b9fb84e141506dacadad608eb8b99

Refactoring the way VTK goes between piece and structured
extents. Before, extent translators were used when the pipeline
moved from structured to unstructured data converting piece
request to extent request. This caused many problems with filters
that altered extents, mainly a lot of redundant IO due to
repartitioning of different extents. This became extremely
cumbersome to manage when running distributed. The new behavior
pushes the extent translation all to way to the readers and
only when readers are able to read a subset. This works much
better. The only downside is that filters need to be able to
handle data extents different than update extents. Most filters
can do this but many imaging filters cannot. Those that are
needed in parallel will have to be updated.

As part of this work, I also removed MAXIMUM_NUMBER_OF_PIECES
and added CAN_HANDLE_PIECE_REQUEST. MAXIMUM_NUMBER_OF_PIECES had
reduced to being a boolean. 1 for serial sources, -1 for parallel
sources. I removed it and added a CAN_HANDLE_PIECE_REQUEST instead.
This key, produced by a source, tells the executive that a source is
able to handle piece request. It is a source only key produced in
RequestInformation and is not propagated downstream. If this key is
not present, the executive will only execute the source for piece 0
to produce the entire data. It is then up to the user to add a filter
that splits the data for other piece requests. The only exception to
this is when CAN_PRODUCE_SUB_EXTENT is present, in which case the
executive will split using an extent translator AT THE source - not
downstream.

Conflicts:
	Filters/FlowPaths/vtkParticleTracerBase.cxx

Change-Id: I8db4040289ff87331adeecded4a738313d9b52df

Change-Id: I6546ff164baca86afb1a73b896dd10b1bce2c005

Change-Id: I5f19b101063e1a25d4f5db5c4356ce5efffbd90d

Change-Id: I10a54acbd076e055d8071414f2fff1ebafe1653d

Change-Id: Ie3a7d94877dd70b82bc86b20816980013956c9ef

Comment reason for <string> inclusion.

Change-Id: I7e0b1d7bd52a3ee66f5d078f330520bb7e6461a2

Now that <sstream> is not included we need <string> to get std::string
when compiling Java wrapper sources.

Change-Id: I5b36410f8bdb2e13c497b0adaa11e95142fd56a0

The VTK standard headers include <iosfwd> and make std::istringstream
available for use as an incomplete type.  That is all vtkXMLReader.h
needs.  Remove the extra <sstream> include.

In particular, by including it before the VTK headers it causes system
headers to be included with inconsistent Large File Support definitions
on AIX, leading to runtime shared library unresolved symbols.  Remove
the inclusion to fix this.

Change-Id: I78ec9efae24c8f721f079ab8946afcde413fe17f

Extend this class so that it can read from either a file or a
string.

Change-Id: Ida093f0c4c44896ed59da96b8950e7ffa2b6351b

subclasses of vtkXMLWriter should now call OpenStream & CloseStream
as opposed to OpenFile & CloseFile.

Change-Id: I39ccdc711d07e96763fc941b5fcd80b1da6b38c5

This commit enables vtkXMLWriter and its subclasses to write
their output to a string instead of a file.

Change-Id: Idff93039f9536379e3ef9abad6ea4ce18b4f2a60

The piece writers should have the same options as was
specified for the parallel writers. SetDebug was also
added though it doesn't affect the file output to behave
the same as the vtkXMLMultiBlockDataWriter.

Change-Id: Icaafd4b5f9811a6b9058eeb4e1c0e2e8fc4a5e38

Change-Id: Icbbe361e127a0cd62cdcd2f5321412fb230981f9

This new class allows us to output vtkTrees in the PhyloXML format.

Change-Id: I9d4f0baaea6c0eba4ebb92730777473cf7b67ecf

Removed priority based streaming and fast path codes in
preparation for future refactoring. These were polluting core
classes despite having a small user base. In the future, they
may be refactored into the appropriate subclasses and "plugins".

Change-Id: I54562546688c6de468b0068e9b6c65e49c5ec269

The tests and data existed, but the tests were not in the CMakeLists.txt
file.

Change-Id: I6adc60d0b5811e86293ca0474e79d029a8693772

The TimeStepRange member variable would have values of {0,-1}
if no time steps were in the input file which also caused
reading from out of bounds of an array.

Change-Id: I428b2b1826b66f30b2d9e859d6e810aee65d405d

Thanks for Jacob Becker <jacob.becker@kitware.com> for the patch.

Change-Id: I2a7fe7c23c064f6148533817649aea20cef27f15

The explicit size gives the user more information as
to acceptible values.

Change-Id: I7baa5dbca7f1b6edbb67ca3139abefea6aebd02f

Change-Id: Ic15b7892ed0b07d2e0acba8b8b28758307b63cc8

Fixes -Wmissing-prototypes warnings.

Change-Id: I577917ab639f522849731dd5023b2b3f6557387a

Adapting an earlier commit message (faab03a4):

The IBM XL compiler cannot choose between the two overloads
method template, producing errors such as:

 1540-0219 (S) The call to [template function] has no best match.

Pass an extra "1" argument to select between "int" and "long"
conversions to help the compiler select the proper overload.
It will choose the int->long conversion only if it cannot match
the pointer form of the second argument.

Change-Id: I55c868d3826d2c495c37ebf4e93f5f3d61948a85

Also, use vtkTypeTemplate in vtkArrayIteratorTemplate to allow
safe down-casting.

Change-Id: I352491a52df8320c711f112feb911c91c5e77e11

In other words, changed from the C to the C++ header name.
Did this only in .h files that are C++.  Omitted ThirdParty.

Change-Id: Iba28d1711befbb7877aa48dffd23522e58c57915

In other words, changed from the C to the C++ header name.
Did this only in .cxx files, and not in ThirdParty.

Change-Id: I81e2b2c7f2db00e98b37d507232fbc84022e8d8f

Note both the change from "" to <> and from the C to
the C++ header name.

Change-Id: I2c547e12b34b7a2dfc99e2b00af56d85e5c63104

Change-Id: I94935b6fe4d5e76e453507f9387b5ca357286cab

A simple implementation of private dependencies, with some of the most
obvious private dependencies moved over. This should be used for all
dependencies that are not exposed in the public API of the classes in
the module.

The target_link_libraries call defaults to private due to the way CMake
implements the link logic. The private dependency logic can help reduce
link line and include directory length for private links where the
dependency's API is not exposed in the module. Also added code to ensure
include directories are not duplicated for modules in the build tree.

Change-Id: If4535338e8d5e9957d7bcce7d3ab0eadec21d2c4

Their declaration violates the 'rule of 3' and was
causing compiler warnings with clang's -Wdeprecated
in C++11.

Change-Id: I959d582deea4ceccc69684be32dccd3521f54807

See bug report.

Change-Id: Ieed0c255417761afe445338e41f1f019518f380f

Add to the Testing/Data directory ExternalData content links mirroring
the content and layout we use from the VTKData/Data directory.

Add a CMake/vtkLegacyData.cmake module, included from CMakeLists.txt and
Testing/External/CMakeLists.txt, to call ExternalData_Expand_Arguments
for all data directories added from VTKData/Data.  This will bulk-fetch
all test input data currently used by tests of any module, enabled or
not.  We can make the DATA{} references more granular later.

Add a VTK_TEST_DATA_DIR variable to refer to the directory we tell the
ExternalData module to populate the real data files.  Replace references
to VTK_DATA_ROOT in test command lines (after -D) with references to
VTK_TEST_DATA_DIR.  Drop the VTK_DATA_ROOT CMake option and stop using
the VTKData repository.

Remove the TESTING_DATA option from the vtk_add_test_cxx API and remove
the VTK_DATA_ROOT option from the vtk_add_test_mpi API since all test
input data are now handled through ExternalData and Testing/Data content
links.

Change-Id: Id02490b76ea2e161b9038188264a4830485039d8

Change-Id: I08fa5337157eda3867866956833ff80445ab70b5

vtkXMLMultiBlockDataWriter was not saving out names for leaf nodes the the
mulitblock dataset. Names were only being saved for non-leaf nodes. Fixed that.

Change-Id: If68a32d64ad5eab2c5f107a236cba6dfecfe125d

Baseline images are now referenced by ExternalData content links stored
directly in each module source tree.  Drop the old VTKData baseline
subdirectory name from the vtk_add_test_* signatures.

Change-Id: I5bdc7a5bf87fc7c8fa77dcd50b79f2f54d6eba31

Change-Id: I7c6ab523d022f28256bb9d29e23ebacbcf6eafdd