Merge branch 'anisotropic-landmark-transform' of https://gitlab.kitware.com/cstew2/vtk into anisotropic-landmark-transform

Rebasing my branch onto master

Fixed some of the main code for the anisotropic mode and added
some testing cases for the mode.

Complete rewrite of Anisotropic scaled Landmark Transformation
code. Instead of using vtkMath functions I switched to using
the third party eigen functions. Problems with the SVD function
is the primary reason along with it being easier to code with.

Rewrote most of the code for the anisotropic landmark transformation.
Hopefully it is cleaner and more udnerstandable.

Needed to set intensity in the test file for landmarktransforms.
Fixed some logical errors with the code for the anisotropic mode.
Code now compiles but doesn't pass the test, probably in the
iterative portion.

Fixing bugs in the code, more still needed
along with actually testing it to make sure
it works correctly.

Added some test cases for the new anisotropic landmark
transform mode.

Added all the necessary code for anisotropic transformations
to be performed. Added a new member to the class that the
user would have to set in order to perform anisotropic
transformations as the algorithm is iterative and needs
a stopping point.

Added some initial code for a new mode allowing for anisotropic landmark transforms
to be performed. Also fixed a typo made in the header file along with some trailing
whitespace left in vtkLandmarkTransform.cxx.

Added all the necessary changes to vtkLandmarkTransform.h to
support my new mode for Anisotropically scaled landmark
registration. Note the #define value for it is just a random
number as these seem to be a holdover from older versions of the
code with many more modes. Could be changed if it conflicts with
older modes.

Fixed some of the main code for the anisotropic mode and added
some testing cases for the mode.

David Gobbi authored 6 years ago and Kitware Robot committed 6 years ago

57add65f Make wrappers check for '= delete' on methods.

Acked-by: Kitware Robot <kwrobot@kitware.com>
Merge-request: !5252

Ken Martin authored 6 years ago and Kitware Robot committed 6 years ago

846bc760 Fix GLES regression on IOS devices

Acked-by: Kitware Robot <kwrobot@kitware.com>
Acked-by: Ken Martin <ken.martin@kitware.com>
Merge-request: !5253

Ken Martin authored 6 years ago and Kitware Robot committed 6 years ago

c79abfba provide user defined copy constructor for info internals

Acked-by: Kitware Robot <kwrobot@kitware.com>
Acked-by: David Gobbi <david.gobbi@gmail.com>
Merge-request: !5251

Regression introduced in 160ce368

Previously, this check was not done because deleted methods in VTK
were always private and therefore already excluded.

It is being used by python wrapping

Utkarsh Ayachit authored 6 years ago and Kitware Robot committed 6 years ago

77ff1899 make loguru an internal-only TPL.

Acked-by: Kitware Robot <kwrobot@kitware.com>
Merge-request: !5245

Ken Martin authored 6 years ago and Kitware Robot committed 6 years ago

34d68e97 try an additional valid image for OSX

Acked-by: Kitware Robot <kwrobot@kitware.com>
Merge-request: !5250

taken of a failing OSX system

Ken Martin authored 6 years ago and Kitware Robot committed 6 years ago

22fd0752 fix issue with opengl image helper on OSX

Acked-by: Kitware Robot <kwrobot@kitware.com>
Merge-request: !5248

OSX seems to require clears even when doing full screen
writes for it to work.

Ken Martin authored 6 years ago and Kitware Robot committed 6 years ago

596f85b4 suppress boost warning fix ospray one

Acked-by: Kitware Robot <kwrobot@kitware.com>
Merge-request: !5247

two buildbot warnings

Loguru doesn't have a standardized library build/distribution mechanism
yet hence we don't support external loguru right now.

Ken Martin authored 6 years ago and Kitware Robot committed 6 years ago

bb95fa89 fix a framebuffer issue in the image helper class

Acked-by: Kitware Robot <kwrobot@kitware.com>
Merge-request: !5246

Ken Martin authored 6 years ago and Kitware Robot committed 6 years ago

6184cf35 add support for newer versions of fmpeg

Acked-by: Kitware Robot <kwrobot@kitware.com>
Merge-request: !5244

Ken Martin authored 6 years ago and Kitware Robot committed 6 years ago

479cf981 suppress some odd warnings that are otherwise caught

Acked-by: Kitware Robot <kwrobot@kitware.com>
Merge-request: !5243

it was not binding the fbo or restoring the prior bindings

Add an updated version of the two key methods that
work with the new ffmpeg API. The old versions are
still there for people who are using an old copy
of ffmpeg.

Will Schroeder authored 6 years ago and Kitware Robot committed 6 years ago

b745a551 Use vtkBoundingBox to generate composite bounding box
97b3789b Tighter bin culling test using oriented sphere radius
3c01339b Added support for scalar trees and composite input

Acked-by: Kitware Robot <kwrobot@kitware.com>
Acked-by: Utkarsh Ayachit <utkarsh.ayachit@kitware.com>
Merge-request: !5030

Mostly odd third party warnings that do not include
the text ThirdParty in the warning line

Ken Martin authored 6 years ago and Kitware Robot committed 6 years ago

797b02c5 add output for verts and lines into gltf

Acked-by: Kitware Robot <kwrobot@kitware.com>
Merge-request: !5241

Previously it only handled polys and strips

In some cases processing of data can be accelerated using instances
of vtkScalarTree. The ability to add and enable a scalar tree has
been provided. In addition, the filter supports composite input. Along
the way the outline filter was modified to support composite inputs as
well (with optional representation types).

Ken Martin authored 6 years ago and Kitware Robot committed 6 years ago

dbe067d7 Allow GetData from const vtkMatrix

Acked-by: Kitware Robot <kwrobot@kitware.com>
Acked-by: Ken Martin <ken.martin@kitware.com>
Merge-request: !5231

Xdmf3 windows build issues

See merge request vtk/vtk!5238

* upstream-xdmf3:
  xdmf3 2019-02-25 (7bccc3d3)