find_package ParaView fails if we find_package HDF5
When we enable HDF5 find_package ParaView errors out. It seems that it's call to find_package requests a different set of components but cmake does not try to find them.
building SENSEI with
#!/bin/bash
cmake -DCMAKE_CXX_FLAGS="-fPIC -std=c++11 -Wall -Wextra -O3 -march=x86-64 -mtune=generic" \
-DCMAKE_C_FLAGS="-fPIC -Wall -Wextra -O3 -march=x86-64 -mtune=generic" \
-DENABLE_PYTHON=ON -DSENSEI_PYTHON_VERSION=3 -DENABLE_CATALYST=ON -DENABLE_CATALYST_PYTHON=ON \
-DParaView_DIR=/home/in-situ-user/sensei_insitu/software/paraview/5.7.1/lib/cmake/paraview-5.7/ \
-DENABLE_VTK_IO=ON -DENABLE_VTK_MPI=ON -DENABLE_ADIOS1=ON \
-DADIOS1_DIR=/home/sensei/sensei_insitu/software/adios/1.13.1 \
-DENABLE_HDF5=ON -DHDF5_ROOT=/usr/lib/x86_64-linux-gnu/hdf5/openmpi \
-DPYTHON_EXECUTABLE=/usr/bin/python3 \
-DCMAKE_INSTALL_PREFIX=/home/sensei/sensei_insitu/software/sensei/3.0.0-catalyst-shared \
$*cmake output/error
in-situ-user@sensei-ascent-sc19:~/sensei_insitu/software/sensei/builds/3.0.0-catalyst-shared$ rm -rf *; ../config-sensei-catalyst.sh ../sensei_3.0.0/
-- The C compiler identification is GNU 7.4.0
-- The CXX compiler identification is GNU 7.4.0
-- Check for working C compiler: /usr/bin/cc
-- Check for working C compiler: /usr/bin/cc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Detecting C compile features
-- Detecting C compile features - done
-- Check for working CXX compiler: /usr/bin/c++
-- Check for working CXX compiler: /usr/bin/c++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- ENABLE_SENSEI=ON
-- ENABLE_PYTHON=ON
-- ENABLE_VTK_GENERIC_ARRAYS=OFF
-- ENABLE_CATALYST=ON
-- ENABLE_CATALYST_PYTHON=ON
-- ENABLE_ADIOS1=ON
-- ENABLE_HDF5=ON
-- ENABLE_CONDUIT=OFF
-- ENABLE_LIBSIM=OFF
-- ENABLE_VTK_IO=ON
-- ENABLE_VTK_MPI=ON
-- ENABLE_VTK_RENDERING=ON
-- ENABLE_VTK_ACCELERATORS=OFF
-- ENABLE_VTK_FILTERS=OFF
-- ENABLE_VTKM=OFF
-- ENABLE_VTKM_RENDERING=OFF
-- ENABLE_PROFILER=OFF
-- ENABLE_OSCILLATORS=ON
-- ENABLE_CONDUITTEST=OFF
-- ENABLE_KRIPKE=OFF
-- CMAKE_BUILD_TYPE=Release
-- CMAKE_CXX_FLAGS=-fPIC -std=c++11 -Wall -Wextra -O3 -march=x86-64 -mtune=generic
-- BUILD_SHARED_LIBS=OFF
-- BUILD_STATIC_EXECS=OFF
-- Looking for pthread.h
-- Looking for pthread.h - found
-- Looking for pthread_create
-- Looking for pthread_create - not found
-- Looking for pthread_create in pthreads
-- Looking for pthread_create in pthreads - not found
-- Looking for pthread_create in pthread
-- Looking for pthread_create in pthread - found
-- Found Threads: TRUE
-- Found MPI_C: /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so (found version "3.1")
-- Found MPI_CXX: /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so (found version "3.1")
-- Found MPI: TRUE (found version "3.1")
-- Found 'adios_config': /home/in-situ-user/sensei_insitu/software/adios/1.13.1/bin/adios_config
-- ADIOS1 linker flags (unparsed): /home/sensei/sensei_insitu/software/adios/1.13.1/lib/libadios.a /home/sensei/sensei_insitu/software/chaos/1.13.1/lib/libevpath.so /home/sensei/sensei_insitu/software/chaos/1.13.1/lib/libatl.so /home/sensei/sensei_insitu/software/chaos/1.13.1/lib/libffs.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libm.so
-- Found ADIOS1: /home/sensei/sensei_insitu/software/adios/1.13.1/lib/libadios.a;/home/sensei/sensei_insitu/software/chaos/1.13.1/lib/libevpath.so;/home/sensei/sensei_insitu/software/chaos/1.13.1/lib/libatl.so;/home/sensei/sensei_insitu/software/chaos/1.13.1/lib/libffs.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libm.so (found version "1.13.1")
-- 1. find_package(HDF5 REQUIRED COMPONENTS C) ===================>
-- Found HDF5: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/lib/libhdf5.so (found version "1.10.0.1") found components: C
-- 1. find_package(HDF5 REQUIRED COMPONENTS C) <===================
-- 1. find_package(ParaView CONFIG QUIET) <===========================================
CMake Error at /usr/share/cmake-3.10/Modules/FindPackageHandleStandardArgs.cmake:137 (message):
Could NOT find HDF5 (missing: HL) (found version "1.10.0.1")
Call Stack (most recent call first):
/usr/share/cmake-3.10/Modules/FindPackageHandleStandardArgs.cmake:378 (_FPHSA_FAILURE_MESSAGE)
/home/in-situ-user/sensei_insitu/software/paraview/5.7.1/lib/cmake/paraview-5.7/vtk/patches/99/FindHDF5.cmake:920 (find_package_handle_standard_args)
/home/in-situ-user/sensei_insitu/software/paraview/5.7.1/lib/cmake/paraview-5.7/vtk/VTK-vtk-module-find-packages.cmake:125 (find_package)
/home/in-situ-user/sensei_insitu/software/paraview/5.7.1/lib/cmake/paraview-5.7/vtk/vtk-config.cmake:115 (include)
/home/in-situ-user/sensei_insitu/software/paraview/5.7.1/lib/cmake/paraview-5.7/paraview-config.cmake:41 (find_package)
CMake/catalyst.cmake:10 (find_package)
CMakeLists.txt:18 (include)
-- Configuring incomplete, errors occurred!
See also "/home/in-situ-user/sensei_insitu/software/sensei/builds/3.0.0-catalyst-shared/CMakeFiles/CMakeOutput.log".
See also "/home/in-situ-user/sensei_insitu/software/sensei/builds/3.0.0-catalyst-shared/CMakeFiles/CMakeError.log".See #49 for background
a couple of work around :
- we could find hdf5 after find paraview
- we could add HL component to our find hdf5 I like neither of these and I think this is a bigger issue with the way VTK/PV is doing their cmake config.