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Autogen: Ignore not existing source files

Sebastian Holtermann requested to merge sebholt/cmake:autogen-nexist-source-fix into master

When iterating through all known source files the autogen initializer unintentionally generated a Cannot find source file error when a source file didn't exist. This lets the autogen initializer silently ignore all not existing source files which aren't GENERATED.

Closes: #17573 (closed)
Closes: #17589 (closed)

Edited by Brad King

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