Reorganize, add README, add pdf manual, initial stab at CMake build.

CMake/FindGLUT.cmake

CMake/FindPackageHandleStandardArgs.cmake

CMakeLists.txt

LICENSE

README

doc/VegaUsersManual.pdf

include/lapack-headers.h

include/macros.h

include/matrixMultiplyMacros.h

include/openGL-headers.h

include/triple.h

libraries/corotationalLinearFEM/Makefile

libraries/elasticForceModel/Makefile

libraries/forceModel/Makefile

libraries/getopts/Makefile

libraries/graph/Makefile

libraries/integrator/Makefile

libraries/isotropicHyperelasticFEM/Makefile

libraries/lighting/Makefile

libraries/loadList/Makefile