# HeadBone

VTKExamples/Python/VisualizationAlgorithms/HeadBone

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### Code

HeadBone.py

    #!/usr/bin/env python

    import vtk

    def main():
        fileName = get_program_parameters()

        colors = vtk.vtkNamedColors()

        # Create the RenderWindow, Renderer and Interactor.
        #

        ren1 = vtk.vtkRenderer()

        renWin = vtk.vtkRenderWindow()
        renWin.AddRenderer(ren1)

        iren = vtk.vtkRenderWindowInteractor()
        iren.SetRenderWindow(renWin)

        # Create the pipeline.
        #

        reader = vtk.vtkMetaImageReader()
        reader.SetFileName(fileName)
        reader.Update()

        locator = vtk.vtkMergePoints()
        locator.SetDivisions(64, 64, 92)
        locator.SetNumberOfPointsPerBucket(2)
        locator.AutomaticOff()

        iso = vtk.vtkMarchingCubes()
        iso.SetInputConnection(reader.GetOutputPort())
        iso.ComputeGradientsOn()
        iso.ComputeScalarsOff()
        iso.SetValue(0, 1150)
        iso.SetLocator(locator)

        isoMapper = vtk.vtkPolyDataMapper()
        isoMapper.SetInputConnection(iso.GetOutputPort())
        isoMapper.ScalarVisibilityOff()

        isoActor = vtk.vtkActor()
        isoActor.SetMapper(isoMapper)
        isoActor.GetProperty().SetColor(colors.GetColor3d("Wheat"))

        outline = vtk.vtkOutlineFilter()
        outline.SetInputConnection(reader.GetOutputPort())

        outlineMapper = vtk.vtkPolyDataMapper()
        outlineMapper.SetInputConnection(outline.GetOutputPort())

        outlineActor = vtk.vtkActor()
        outlineActor.SetMapper(outlineMapper)

        # Add the actors to the renderer, set the background and size.
        #
        ren1.AddActor(outlineActor)
        ren1.AddActor(isoActor)
        ren1.SetBackground(colors.GetColor3d("SlateGray"))
        ren1.GetActiveCamera().SetFocalPoint(0, 0, 0)
        ren1.GetActiveCamera().SetPosition(0, -1, 0)
        ren1.GetActiveCamera().SetViewUp(0, 0, -1)
        ren1.ResetCamera()
        ren1.GetActiveCamera().Dolly(1.5)
        ren1.ResetCameraClippingRange()

        renWin.SetSize(640, 480)

        renWin.Render()
        iren.Start()

    def get_program_parameters():
        import argparse
        description = 'Marching cubes surface of human bone.'
        epilogue = '''
        '''
        parser = argparse.ArgumentParser(description=description, epilog=epilogue,
                                         formatter_class=argparse.RawDescriptionHelpFormatter)
        parser.add_argument('filename', help='FullHead.mhd.')
        args = parser.parse_args()
        return args.filename

    if __name__ == '__main__':
        main()