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formatting: capture stderr for the error path with a timeout

Ben Boeckel requested to merge ben.boeckel/rust-git-checks:formatting-msg-with-timeout into master

This is only used in logs, so it is not covered by the test suite. It improves the logs that we see when a timeout-based command fails:

failed to run the clang-format formatting command: failed with exit code Some(3), signal None

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