IOSS  2.0
Iopg_DatabaseIO.h
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32 
33 #ifndef SIERRA_Iopg_DatabaseIO_h
34 #define SIERRA_Iopg_DatabaseIO_h
35 
36 #include "Ioss_State.h" // for State
37 #include <Ioss_CodeTypes.h>
38 #include <Ioss_DBUsage.h> // for DatabaseUsage
39 #include <Ioss_DatabaseIO.h> // for DatabaseIO
40 #include <Ioss_IOFactory.h> // for IOFactory
41 #include <Ioss_Map.h> // for Map
42 #include <stddef.h> // for size_t
43 #include <stdint.h> // for int64_t
44 #include <string> // for string
45 #include <vector> // for vector
46 
47 namespace Ioss {
48  class CommSet;
49  class EdgeBlock;
50  class EdgeSet;
51  class ElementBlock;
52  class ElementSet;
53  class EntityBlock;
54  class FaceBlock;
55  class FaceSet;
56  class Field;
57  class GroupingEntity;
58  class NodeBlock;
59  class NodeSet;
60  class PropertyManager;
61  class Region;
62  class SideBlock;
63  class SideSet;
64  class StructuredBlock;
65 } // namespace Ioss
66 
67 /** \brief A namespace for the pamgen database format.
68  */
69 namespace Iopg {
70  class IOFactory : public Ioss::IOFactory
71  {
72  public:
73  static const IOFactory *factory();
74 
75  private:
76  IOFactory();
77  Ioss::DatabaseIO *make_IO(const std::string &filename, Ioss::DatabaseUsage db_usage,
78  MPI_Comm communicator, const Ioss::PropertyManager &properties) const;
79  };
80 
82  {
83  public:
84  DatabaseIO(Ioss::Region *region, const std::string &filename, Ioss::DatabaseUsage db_usage,
85  MPI_Comm communicator, const Ioss::PropertyManager &properties);
86  DatabaseIO(const DatabaseIO &from) = delete;
87  DatabaseIO &operator=(const DatabaseIO &from) = delete;
88  ~DatabaseIO();
89 
90  // Check capabilities of input/output database... Returns an
91  // unsigned int with the supported Ioss::EntityTypes or'ed
92  // together. If "return_value & Ioss::EntityType" is set, then the
93  // database supports that type (e.g. return_value & Ioss::FACESET)
94  unsigned entity_field_support() const override
95  {
97  }
98 
99  int int_byte_size_db() const override { return 4; }
100 
101  std::string title() const { return databaseTitle; }
102  int maximum_symbol_length() const override { return 32; }
103 
104  void compute_block_membership(Ioss::SideBlock * efblock,
105  std::vector<std::string> &block_membership) const;
106 
107  private:
108  void read_meta_data__() override;
109 
110  bool begin__(Ioss::State state) override;
111  bool end__(Ioss::State state) override;
112 
113  bool begin_state__(Ioss::Region *region, int state, double time) override;
114  bool end_state__(Ioss::Region *region, int state, double time) override;
115 
116  void read_region();
117  void read_communication_metadata();
118 
119  void get_nodeblocks();
120  void get_elemblocks();
121  void get_nodesets();
122  void get_sidesets();
123  void get_commsets();
124 
125  int get_side_connectivity(const Ioss::SideBlock *fb, int id, int side_count, int *fconnect,
126  size_t data_size) const;
127  int get_side_distributions(const Ioss::SideBlock *fb, int id, int side_count, double *dist_fact,
128  size_t data_size) const;
129 
130  const Ioss::Map &get_node_map() const;
131  const Ioss::Map &get_element_map() const;
132 
133  int64_t get_field_internal(const Ioss::Region *reg, const Ioss::Field &field, void *data,
134  size_t data_size) const override;
135  int64_t get_field_internal(const Ioss::NodeBlock *nb, const Ioss::Field &field, void *data,
136  size_t data_size) const override;
137  int64_t get_field_internal(const Ioss::EdgeBlock *nb, const Ioss::Field &field, void *data,
138  size_t data_size) const override
139  {
140  return 0;
141  }
142  int64_t get_field_internal(const Ioss::FaceBlock *nb, const Ioss::Field &field, void *data,
143  size_t data_size) const override
144  {
145  return 0;
146  }
147  int64_t get_field_internal(const Ioss::ElementBlock *eb, const Ioss::Field &field, void *data,
148  size_t data_size) const override;
149  int64_t get_field_internal(const Ioss::SideBlock *fb, const Ioss::Field &field, void *data,
150  size_t data_size) const override;
151  int64_t get_field_internal(const Ioss::NodeSet *ns, const Ioss::Field &field, void *data,
152  size_t data_size) const override;
153  int64_t get_field_internal(const Ioss::EdgeSet *ns, const Ioss::Field &field, void *data,
154  size_t data_size) const override
155  {
156  return 0;
157  }
158  int64_t get_field_internal(const Ioss::FaceSet *ns, const Ioss::Field &field, void *data,
159  size_t data_size) const override
160  {
161  return 0;
162  }
163  int64_t get_field_internal(const Ioss::ElementSet *ns, const Ioss::Field &field, void *data,
164  size_t data_size) const override
165  {
166  return 0;
167  }
168  int64_t get_field_internal(const Ioss::SideSet *fs, const Ioss::Field &field, void *data,
169  size_t data_size) const override;
170  int64_t get_field_internal(const Ioss::CommSet *cs, const Ioss::Field &field, void *data,
171  size_t data_size) const override;
172 
173  int64_t get_field_internal(const Ioss::StructuredBlock *sb, const Ioss::Field &field,
174  void *data, size_t data_size) const override
175  {
176  return 0;
177  }
178 
179  int64_t put_field_internal(const Ioss::Region *reg, const Ioss::Field &field, void *data,
180  size_t data_size) const override;
181  int64_t put_field_internal(const Ioss::NodeBlock *nb, const Ioss::Field &field, void *data,
182  size_t data_size) const override;
183  int64_t put_field_internal(const Ioss::EdgeBlock *nb, const Ioss::Field &field, void *data,
184  size_t data_size) const override
185  {
186  return 0;
187  }
188  int64_t put_field_internal(const Ioss::FaceBlock *nb, const Ioss::Field &field, void *data,
189  size_t data_size) const override
190  {
191  return 0;
192  }
193  int64_t put_field_internal(const Ioss::ElementBlock *eb, const Ioss::Field &field, void *data,
194  size_t data_size) const override;
195  int64_t put_field_internal(const Ioss::SideBlock *fb, const Ioss::Field &field, void *data,
196  size_t data_size) const override;
197  int64_t put_field_internal(const Ioss::NodeSet *ns, const Ioss::Field &field, void *data,
198  size_t data_size) const override;
199  int64_t put_field_internal(const Ioss::EdgeSet *ns, const Ioss::Field &field, void *data,
200  size_t data_size) const override
201  {
202  return 0;
203  }
204  int64_t put_field_internal(const Ioss::FaceSet *ns, const Ioss::Field &field, void *data,
205  size_t data_size) const override
206  {
207  return 0;
208  }
209  int64_t put_field_internal(const Ioss::ElementSet *ns, const Ioss::Field &field, void *data,
210  size_t data_size) const override
211  {
212  return 0;
213  }
214  int64_t put_field_internal(const Ioss::SideSet *fs, const Ioss::Field &field, void *data,
215  size_t data_size) const override;
216  int64_t put_field_internal(const Ioss::CommSet *cs, const Ioss::Field &field, void *data,
217  size_t data_size) const override;
218  int64_t put_field_internal(const Ioss::StructuredBlock *sb, const Ioss::Field &field,
219  void *data, size_t data_size) const override
220  {
221  return 0;
222  }
223 
224  std::string databaseTitle;
225 
227 
232 
233  // Communication Set Data
240  };
241 } // namespace Iopg
242 #endif // SIERRA_Iopg_DatabaseIO_h
Definition: Ioss_EntityType.h:52
std::string title() const
Definition: Iopg_DatabaseIO.h:101
A namespace for the pamgen database format.
Definition: Iopg_DatabaseIO.C:58
Definition: Ioss_EntityType.h:48
int64_t get_field_internal(const Ioss::StructuredBlock *sb, const Ioss::Field &field, void *data, size_t data_size) const override
Definition: Iopg_DatabaseIO.h:173
int64_t get_field_internal(const Ioss::ElementSet *ns, const Ioss::Field &field, void *data, size_t data_size) const override
Definition: Iopg_DatabaseIO.h:163
The main namespace for the Ioss library.
Definition: Iocgns_DatabaseIO.h:50
An input or output Database.
Definition: Ioss_DatabaseIO.h:80
int64_t get_field_internal(const Ioss::EdgeBlock *nb, const Ioss::Field &field, void *data, size_t data_size) const override
Definition: Iopg_DatabaseIO.h:137
int commsetElemCount
Definition: Iopg_DatabaseIO.h:239
A collection of nodes.
Definition: Ioss_NodeSet.h:53
A collection of element faces with the same topology.
Definition: Ioss_FaceBlock.h:53
A collection of element faces.
Definition: Ioss_FaceSet.h:54
Definition: Ioss_EntityType.h:43
int maximum_symbol_length() const override
Get the length of the longest name in the database file.
Definition: Iopg_DatabaseIO.h:102
A collection of element edges.
Definition: Ioss_EdgeSet.h:54
int nodesetCount
Definition: Iopg_DatabaseIO.h:230
int64_t put_field_internal(const Ioss::StructuredBlock *sb, const Ioss::Field &field, void *data, size_t data_size) const override
Definition: Iopg_DatabaseIO.h:218
A collection of element sides having the same topology.
Definition: Ioss_SideBlock.h:61
int64_t put_field_internal(const Ioss::FaceBlock *nb, const Ioss::Field &field, void *data, size_t data_size) const override
Definition: Iopg_DatabaseIO.h:188
std::vector< int > IntVector
Definition: Ioss_CodeTypes.h:42
int sidesetCount
Definition: Iopg_DatabaseIO.h:231
Ioss::IntVector nodeCmapIds
Definition: Iopg_DatabaseIO.h:234
int64_t put_field_internal(const Ioss::FaceSet *ns, const Ioss::Field &field, void *data, size_t data_size) const override
Definition: Iopg_DatabaseIO.h:204
State
Access states for a database.
Definition: Ioss_State.h:42
Ioss::IntVector elemCmapElemCnts
Definition: Iopg_DatabaseIO.h:237
The main public user interface for creating Ioss::DatabaseIO objects.
Definition: Ioss_IOFactory.h:58
int nodeBlockCount
Definition: Iopg_DatabaseIO.h:228
A collection of elements having the same topology.
Definition: Ioss_ElementBlock.h:48
Definition: Iopg_DatabaseIO.h:81
A structured zone – i,j,k.
Definition: Ioss_StructuredBlock.h:98
A collection of elements.
Definition: Ioss_ElementSet.h:54
DatabaseUsage
Specifies how an Ioss::DatabaseIO object will be used.
Definition: Ioss_DBUsage.h:40
int spatialDimension
Definition: Iopg_DatabaseIO.h:226
int64_t put_field_internal(const Ioss::ElementSet *ns, const Ioss::Field &field, void *data, size_t data_size) const override
Definition: Iopg_DatabaseIO.h:209
Ioss::IntVector nodeCmapNodeCnts
Definition: Iopg_DatabaseIO.h:235
A collection of all nodes in the region.
Definition: Ioss_NodeBlock.h:53
Definition: Iopg_DatabaseIO.h:70
Definition: Ioss_EntityType.h:40
Definition: Ioss_Map.h:52
Definition: Ioss_CommSet.h:51
int64_t get_field_internal(const Ioss::FaceSet *ns, const Ioss::Field &field, void *data, size_t data_size) const override
Definition: Iopg_DatabaseIO.h:158
A grouping entity that contains other grouping entities.
Definition: Ioss_Region.h:98
int64_t get_field_internal(const Ioss::FaceBlock *nb, const Ioss::Field &field, void *data, size_t data_size) const override
Definition: Iopg_DatabaseIO.h:142
int64_t get_field_internal(const Ioss::EdgeSet *ns, const Ioss::Field &field, void *data, size_t data_size) const override
Definition: Iopg_DatabaseIO.h:153
A collection of element sides.
Definition: Ioss_SideSet.h:59
Holds metadata for bulk data associated with a GroupingEntity.
Definition: Ioss_Field.h:47
int MPI_Comm
Definition: Ioss_CodeTypes.h:79
Definition: Ioss_EntityType.h:44
Ioss::IntVector elemCmapIds
Definition: Iopg_DatabaseIO.h:236
std::string databaseTitle
Definition: Iopg_DatabaseIO.h:224
int commsetNodeCount
Definition: Iopg_DatabaseIO.h:238
A collection of Ioss::Property objects.
Definition: Ioss_PropertyManager.h:49
int int_byte_size_db() const override
Definition: Iopg_DatabaseIO.h:99
std::vector< char > data
Definition: Ioss_Utils.C:78
A collection of element edges with the same topology.
Definition: Ioss_EdgeBlock.h:53
int64_t put_field_internal(const Ioss::EdgeBlock *nb, const Ioss::Field &field, void *data, size_t data_size) const override
Definition: Iopg_DatabaseIO.h:183
int elementBlockCount
Definition: Iopg_DatabaseIO.h:229
int64_t put_field_internal(const Ioss::EdgeSet *ns, const Ioss::Field &field, void *data, size_t data_size) const override
Definition: Iopg_DatabaseIO.h:199
unsigned entity_field_support() const override
Definition: Iopg_DatabaseIO.h:94