IOSS  2.0
Iogn_DatabaseIO.h
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32 
33 #ifndef IOSS_Iogn_DatabaseIO_h
34 #define IOSS_Iogn_DatabaseIO_h
35 
36 #include "Ioss_State.h" // for State
37 #include <Ioss_CodeTypes.h>
38 #include <Ioss_DBUsage.h> // for DatabaseUsage
39 #include <Ioss_DatabaseIO.h> // for DatabaseIO
40 #include <Ioss_IOFactory.h> // for IOFactory
41 #include <Ioss_Map.h> // for Map
42 #include <cstddef> // for size_t
43 #include <cstdint> // for int64_t
44 #include <string> // for string
45 #include <vector> // for vector
46 
47 namespace Iogn {
48  class GeneratedMesh;
49 } // namespace Iogn
50 namespace Ioss {
51  class CommSet;
52  class EdgeBlock;
53  class EdgeSet;
54  class ElementBlock;
55  class ElementSet;
56  class FaceBlock;
57  class FaceSet;
58  class Field;
59  class GroupingEntity;
60  class NodeBlock;
61  class NodeSet;
62  class PropertyManager;
63  class Region;
64  class SideBlock;
65  class SideSet;
66  class StructuredBlock;
67 } // namespace Ioss
68 
69 namespace Ioss {
70  class EntityBlock;
71 } // namespace Ioss
72 
73 /** \brief A namespace for the generated database format.
74  */
75 namespace Iogn {
76 
77  class IOFactory : public Ioss::IOFactory
78  {
79  public:
80  static const IOFactory *factory();
81 
82  private:
83  IOFactory();
84  Ioss::DatabaseIO *make_IO(const std::string &filename, Ioss::DatabaseUsage db_usage,
85  MPI_Comm communicator,
86  const Ioss::PropertyManager &props) const override;
87  };
88 
90  {
91  public:
92  DatabaseIO(Ioss::Region *region, const std::string &filename, Ioss::DatabaseUsage db_usage,
93  MPI_Comm communicator, const Ioss::PropertyManager &props);
94  DatabaseIO(const DatabaseIO &from) = delete;
95  DatabaseIO &operator=(const DatabaseIO &from) = delete;
96 
97  ~DatabaseIO() override;
98 
99  // Check capabilities of input/output database... Returns an
100  // unsigned int with the supported Ioss::EntityTypes or'ed
101  // together. If "return_value & Ioss::EntityType" is set, then the
102  // database supports that type (e.g. return_value & Ioss::FACESET)
103  unsigned entity_field_support() const override;
104 
105  int int_byte_size_db() const override { return int_byte_size_api(); }
106 
107  const GeneratedMesh *get_generated_mesh() const { return m_generatedMesh; }
108 
109  void setGeneratedMesh(Iogn::GeneratedMesh *generatedMesh) { m_generatedMesh = generatedMesh; }
110 
111  const std::vector<std::string> &get_sideset_names() const { return m_sideset_names; }
112 
113  private:
114  void read_meta_data__() override;
115 
116  bool begin__(Ioss::State state) override;
117  bool end__(Ioss::State state) override;
118 
119  bool begin_state__(Ioss::Region *region, int state, double time) override;
120  bool end_state__(Ioss::Region *region, int state, double time) override;
121 
122  void get_step_times__() override;
123  void get_nodeblocks();
124  void get_elemblocks();
125  void get_nodesets();
126  void get_sidesets();
127  void get_commsets();
128 
129  const Ioss::Map &get_node_map() const;
130  const Ioss::Map &get_element_map() const;
131 
132  int64_t get_field_internal(const Ioss::Region *reg, const Ioss::Field &field, void *data,
133  size_t data_size) const override;
134  int64_t get_field_internal(const Ioss::NodeBlock *nb, const Ioss::Field &field, void *data,
135  size_t data_size) const override;
136  int64_t get_field_internal(const Ioss::EdgeBlock *nb, const Ioss::Field &field, void *data,
137  size_t data_size) const override;
138  int64_t get_field_internal(const Ioss::FaceBlock *nb, const Ioss::Field &field, void *data,
139  size_t data_size) const override;
140  int64_t get_field_internal(const Ioss::ElementBlock *eb, const Ioss::Field &field, void *data,
141  size_t data_size) const override;
142  int64_t get_field_internal(const Ioss::StructuredBlock *sb, const Ioss::Field &field,
143  void *data, size_t data_size) const override
144  {
145  return -1;
146  }
147  int64_t get_field_internal(const Ioss::SideBlock *ef_blk, const Ioss::Field &field, void *data,
148  size_t data_size) const override;
149  int64_t get_field_internal(const Ioss::NodeSet *ns, const Ioss::Field &field, void *data,
150  size_t data_size) const override;
151  int64_t get_field_internal(const Ioss::EdgeSet *ns, const Ioss::Field &field, void *data,
152  size_t data_size) const override;
153  int64_t get_field_internal(const Ioss::FaceSet *ns, const Ioss::Field &field, void *data,
154  size_t data_size) const override;
155  int64_t get_field_internal(const Ioss::ElementSet *ns, const Ioss::Field &field, void *data,
156  size_t data_size) const override;
157  int64_t get_field_internal(const Ioss::SideSet *fs, const Ioss::Field &field, void *data,
158  size_t data_size) const override;
159  int64_t get_field_internal(const Ioss::CommSet *cs, const Ioss::Field &field, void *data,
160  size_t data_size) const override;
161 
162  int64_t put_field_internal(const Ioss::Region *reg, const Ioss::Field &field, void *data,
163  size_t data_size) const override;
164  int64_t put_field_internal(const Ioss::NodeBlock *nb, const Ioss::Field &field, void *data,
165  size_t data_size) const override;
166  int64_t put_field_internal(const Ioss::EdgeBlock *nb, const Ioss::Field &field, void *data,
167  size_t data_size) const override;
168  int64_t put_field_internal(const Ioss::FaceBlock *nb, const Ioss::Field &field, void *data,
169  size_t data_size) const override;
170  int64_t put_field_internal(const Ioss::ElementBlock *eb, const Ioss::Field &field, void *data,
171  size_t data_size) const override;
172  int64_t put_field_internal(const Ioss::SideBlock *fb, const Ioss::Field &field, void *data,
173  size_t data_size) const override;
174  int64_t put_field_internal(const Ioss::NodeSet *ns, const Ioss::Field &field, void *data,
175  size_t data_size) const override;
176  int64_t put_field_internal(const Ioss::EdgeSet *ns, const Ioss::Field &field, void *data,
177  size_t data_size) const override;
178  int64_t put_field_internal(const Ioss::FaceSet *ns, const Ioss::Field &field, void *data,
179  size_t data_size) const override;
180  int64_t put_field_internal(const Ioss::ElementSet *ns, const Ioss::Field &field, void *data,
181  size_t data_size) const override;
182  int64_t put_field_internal(const Ioss::SideSet *fs, const Ioss::Field &field, void *data,
183  size_t data_size) const override;
184  int64_t put_field_internal(const Ioss::CommSet *cs, const Ioss::Field &field, void *data,
185  size_t data_size) const override;
186  int64_t put_field_internal(const Ioss::StructuredBlock *sb, const Ioss::Field &field,
187  void *data, size_t data_size) const override
188  {
189  return -1;
190  }
191 
192  void add_transient_fields(Ioss::GroupingEntity *entity);
193 
194  GeneratedMesh * m_generatedMesh{nullptr};
195  std::vector<std::string> m_sideset_names;
196 
197  double currentTime{0.0};
198  int spatialDimension{3};
199 
200  int elementBlockCount{0};
201  int nodesetCount{0};
202  int sidesetCount{0};
203 
204  bool m_useVariableDf{true};
205  };
206 } // namespace Iogn
207 #endif // IOSS_Iogn_DatabaseIO_h
int int_byte_size_db() const override
Definition: Iogn_DatabaseIO.h:105
const GeneratedMesh * get_generated_mesh() const
Definition: Iogn_DatabaseIO.h:107
The main namespace for the Ioss library.
Definition: Iocgns_DatabaseIO.h:50
An input or output Database.
Definition: Ioss_DatabaseIO.h:80
A collection of nodes.
Definition: Ioss_NodeSet.h:53
A collection of element faces with the same topology.
Definition: Ioss_FaceBlock.h:53
A collection of element faces.
Definition: Ioss_FaceSet.h:54
Base class for all &#39;grouping&#39; entities. The following derived classes are typical: ...
Definition: Ioss_GroupingEntity.h:93
A collection of element edges.
Definition: Ioss_EdgeSet.h:54
A collection of element sides having the same topology.
Definition: Ioss_SideBlock.h:61
State
Access states for a database.
Definition: Ioss_State.h:42
The main public user interface for creating Ioss::DatabaseIO objects.
Definition: Ioss_IOFactory.h:58
A collection of elements having the same topology.
Definition: Ioss_ElementBlock.h:48
A structured zone – i,j,k.
Definition: Ioss_StructuredBlock.h:98
Definition: Iogn_GeneratedMesh.h:48
A collection of elements.
Definition: Ioss_ElementSet.h:54
DatabaseUsage
Specifies how an Ioss::DatabaseIO object will be used.
Definition: Ioss_DBUsage.h:40
void setGeneratedMesh(Iogn::GeneratedMesh *generatedMesh)
Definition: Iogn_DatabaseIO.h:109
A namespace for the generated database format.
Definition: Iogn_DashSurfaceMesh.C:38
A collection of all nodes in the region.
Definition: Ioss_NodeBlock.h:53
int64_t get_field_internal(const Ioss::StructuredBlock *sb, const Ioss::Field &field, void *data, size_t data_size) const override
Definition: Iogn_DatabaseIO.h:142
Definition: Ioss_Map.h:52
Definition: Ioss_CommSet.h:51
Definition: Iogn_DatabaseIO.h:77
A grouping entity that contains other grouping entities.
Definition: Ioss_Region.h:98
A collection of element sides.
Definition: Ioss_SideSet.h:59
Holds metadata for bulk data associated with a GroupingEntity.
Definition: Ioss_Field.h:47
int MPI_Comm
Definition: Ioss_CodeTypes.h:79
Definition: Iogn_DatabaseIO.h:89
std::vector< std::string > m_sideset_names
Definition: Iogn_DatabaseIO.h:195
int64_t put_field_internal(const Ioss::StructuredBlock *sb, const Ioss::Field &field, void *data, size_t data_size) const override
Definition: Iogn_DatabaseIO.h:186
A collection of Ioss::Property objects.
Definition: Ioss_PropertyManager.h:49
const std::vector< std::string > & get_sideset_names() const
Definition: Iogn_DatabaseIO.h:111
std::vector< char > data
Definition: Ioss_Utils.C:78
A collection of element edges with the same topology.
Definition: Ioss_EdgeBlock.h:53