IOSS  2.0
Iodw_DatabaseIO.h
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32 
33 #ifndef Iodw_DatabaseIO_h
34 #define Iodw_DatabaseIO_h
35 
36 #include <Ioss_CodeTypes.h>
37 #include <Ioss_DBUsage.h> // for DatabaseUsage
38 #include <Ioss_DatabaseIO.h> // for DatabaseIO
39 #include <Ioss_IOFactory.h> // for IOFactory
40 #include <Ioss_Map.h> // for Map
41 #include <Ioss_State.h> // for State
42 #include <cstddef> // for size_t
43 #include <cstdint> // for int64_t
44 #include <string> // for string
45 #include <vector> // for vector
46 
47 namespace Ioss {
48  class CommSet;
49  class EdgeBlock;
50  class EdgeSet;
51  class ElementBlock;
52  class ElementSet;
53  class EntityBlock;
54  class FaceBlock;
55  class FaceSet;
56  class Field;
57  class GroupingEntity;
58  class NodeBlock;
59  class NodeSet;
60  class PropertyManager;
61  class Region;
62  class SideBlock;
63  class SideSet;
64  class StructuredBlock;
65 } // namespace Ioss
66 
67 /** \brief A namespace for the pamgen database format.
68  */
69 namespace Iodw {
70  class IOFactory : public Ioss::IOFactory
71  {
72  public:
73  static const IOFactory *factory();
74 
75  private:
76  IOFactory();
77  Ioss::DatabaseIO *make_IO(const std::string &filename, Ioss::DatabaseUsage db_usage,
78  MPI_Comm communicator, const Ioss::PropertyManager &properties) const;
79  };
80 
82  {
83  public:
84  DatabaseIO(Ioss::Region *region, const std::string &filename, Ioss::DatabaseUsage db_usage,
85  MPI_Comm communicator, const Ioss::PropertyManager &properties);
86  DatabaseIO(const DatabaseIO &from) = delete;
87  DatabaseIO &operator=(const DatabaseIO &from) = delete;
88  ~DatabaseIO();
89 
90  // Check capabilities of input/output database... Returns an
91  // unsigned int with the supported Ioss::EntityTypes or'ed
92  // together. If "return_value & Ioss::EntityType" is set, then the
93  // database supports that type (e.g. return_value & Ioss::FACESET)
94  unsigned entity_field_support() const override { return 0; }
95 
96  std::string title() const { return databaseTitle; }
97  int spatial_dimension() const { return spatialDimension; }
98  int node_count() const { return nodeCount; }
99  int side_count() const { return 0; }
100  int element_count() const { return elementCount; }
101  int node_block_count() const { return nodeBlockCount; }
102  int element_block_count() const { return elementBlockCount; }
103  int sideset_count() const { return sidesetCount; }
104  int nodeset_count() const { return nodesetCount; }
105  int maximum_symbol_length() const override { return 32; }
106 
107  void compute_block_membership(Ioss::SideBlock * efblock,
108  std::vector<std::string> &block_membership) const;
109 
110  private:
111  void read_meta_data__() override;
112 
113  bool begin__(Ioss::State state) override { return false; };
114  bool end__(Ioss::State state) override { return false; };
115 
116  bool begin_state__(Ioss::Region *region, int state, double time) override { return false; };
117  bool end_state__(Ioss::Region *region, int state, double time) override { return false; };
118 
119  void read_region();
120  void read_communication_metadata();
121 
122  /*
123  * TODO identify all the get_*{blocks|sets} needed here
124  */
125  void get_edgeblocks();
126  void get_elemblocks();
127  void get_faceblocks();
128  void get_nodeblocks();
129 
130  void get_edgesets();
131  void get_elemsets();
132  void get_facesets();
133  void get_nodesets();
134 
135  int get_side_connectivity(const Ioss::SideBlock *fb, int id, int side_count, int *fconnect,
136  size_t data_size) const;
137  int get_side_distributions(const Ioss::SideBlock *fb, int id, int side_count, double *dist_fact,
138  size_t data_size) const;
139 
140  const Ioss::Map &get_node_map() const;
141  const Ioss::Map &get_element_map() const;
142 
143  int64_t get_field_internal(const Ioss::Region *reg, const Ioss::Field &field, void *data,
144  size_t data_size) const override;
145  int64_t get_field_internal(const Ioss::NodeBlock *nb, const Ioss::Field &field, void *data,
146  size_t data_size) const override;
147  int64_t get_field_internal(const Ioss::EdgeBlock *nb, const Ioss::Field &field, void *data,
148  size_t data_size) const override;
149  int64_t get_field_internal(const Ioss::FaceBlock *nb, const Ioss::Field &field, void *data,
150  size_t data_size) const override;
151  int64_t get_field_internal(const Ioss::ElementBlock *eb, const Ioss::Field &field, void *data,
152  size_t data_size) const override;
153  int64_t get_field_internal(const Ioss::SideBlock *fb, const Ioss::Field &field, void *data,
154  size_t data_size) const override;
155  int64_t get_field_internal(const Ioss::NodeSet *ns, const Ioss::Field &field, void *data,
156  size_t data_size) const override;
157  int64_t get_field_internal(const Ioss::EdgeSet *ns, const Ioss::Field &field, void *data,
158  size_t data_size) const override;
159  int64_t get_field_internal(const Ioss::FaceSet *ns, const Ioss::Field &field, void *data,
160  size_t data_size) const override;
161  int64_t get_field_internal(const Ioss::ElementSet *ns, const Ioss::Field &field, void *data,
162  size_t data_size) const override;
163  int64_t get_field_internal(const Ioss::SideSet *fs, const Ioss::Field &field, void *data,
164  size_t data_size) const override;
165  int64_t get_field_internal(const Ioss::CommSet *cs, const Ioss::Field &field, void *data,
166  size_t data_size) const override;
167  int64_t get_field_internal(const Ioss::StructuredBlock *sb, const Ioss::Field &field,
168  void *data, size_t data_size) const override;
169  int64_t put_field_internal(const Ioss::Region *reg, const Ioss::Field &field, void *data,
170  size_t data_size) const override;
171  int64_t put_field_internal(const Ioss::NodeBlock *nb, const Ioss::Field &field, void *data,
172  size_t data_size) const override;
173  int64_t put_field_internal(const Ioss::EdgeBlock *nb, const Ioss::Field &field, void *data,
174  size_t data_size) const override;
175  int64_t put_field_internal(const Ioss::FaceBlock *nb, const Ioss::Field &field, void *data,
176  size_t data_size) const override;
177  int64_t put_field_internal(const Ioss::ElementBlock *eb, const Ioss::Field &field, void *data,
178  size_t data_size) const override;
179  int64_t put_field_internal(const Ioss::SideBlock *fb, const Ioss::Field &field, void *data,
180  size_t data_size) const override;
181  int64_t put_field_internal(const Ioss::NodeSet *ns, const Ioss::Field &field, void *data,
182  size_t data_size) const override;
183  int64_t put_field_internal(const Ioss::EdgeSet *ns, const Ioss::Field &field, void *data,
184  size_t data_size) const override;
185  int64_t put_field_internal(const Ioss::FaceSet *ns, const Ioss::Field &field, void *data,
186  size_t data_size) const override;
187  int64_t put_field_internal(const Ioss::ElementSet *ns, const Ioss::Field &field, void *data,
188  size_t data_size) const override;
189  int64_t put_field_internal(const Ioss::SideSet *fs, const Ioss::Field &field, void *data,
190  size_t data_size) const override;
191  int64_t put_field_internal(const Ioss::CommSet *cs, const Ioss::Field &field, void *data,
192  size_t data_size) const override;
193  int64_t put_field_internal(const Ioss::StructuredBlock *sb, const Ioss::Field &field,
194  void *data, size_t data_size) const override;
195 
196  std::string databaseTitle;
197 
199 
204 
205  // Communication Set Data
212  };
213 } // namespace Iodw
214 #endif // Iodw_DatabaseIO_h
int side_count() const
Definition: Iodw_DatabaseIO.h:99
int nodeBlockCount
Definition: Iodw_DatabaseIO.h:200
bool end_state__(Ioss::Region *region, int state, double time) override
Definition: Iodw_DatabaseIO.h:117
Ioss::IntVector elemCmapElemCnts
Definition: Iodw_DatabaseIO.h:209
int element_block_count() const
Definition: Iodw_DatabaseIO.h:102
bool begin__(Ioss::State state) override
Definition: Iodw_DatabaseIO.h:113
The main namespace for the Ioss library.
Definition: Iocgns_DatabaseIO.h:50
An input or output Database.
Definition: Ioss_DatabaseIO.h:80
unsigned entity_field_support() const override
Definition: Iodw_DatabaseIO.h:94
int nodeset_count() const
Definition: Iodw_DatabaseIO.h:104
bool begin_state__(Ioss::Region *region, int state, double time) override
Definition: Iodw_DatabaseIO.h:116
Ioss::IntVector nodeCmapIds
Definition: Iodw_DatabaseIO.h:206
A collection of nodes.
Definition: Ioss_NodeSet.h:53
A collection of element faces with the same topology.
Definition: Ioss_FaceBlock.h:53
int spatial_dimension() const
Definition: Iodw_DatabaseIO.h:97
A collection of element faces.
Definition: Ioss_FaceSet.h:54
int sideset_count() const
Definition: Iodw_DatabaseIO.h:103
Ioss::IntVector nodeCmapNodeCnts
Definition: Iodw_DatabaseIO.h:207
int nodesetCount
Definition: Iodw_DatabaseIO.h:202
int elementBlockCount
Definition: Iodw_DatabaseIO.h:201
A collection of element edges.
Definition: Ioss_EdgeSet.h:54
std::string databaseTitle
Definition: Iodw_DatabaseIO.h:196
int node_block_count() const
Definition: Iodw_DatabaseIO.h:101
A collection of element sides having the same topology.
Definition: Ioss_SideBlock.h:61
std::vector< int > IntVector
Definition: Ioss_CodeTypes.h:42
std::string title() const
Definition: Iodw_DatabaseIO.h:96
State
Access states for a database.
Definition: Ioss_State.h:42
The main public user interface for creating Ioss::DatabaseIO objects.
Definition: Ioss_IOFactory.h:58
A collection of elements having the same topology.
Definition: Ioss_ElementBlock.h:48
A structured zone – i,j,k.
Definition: Ioss_StructuredBlock.h:98
A collection of elements.
Definition: Ioss_ElementSet.h:54
DatabaseUsage
Specifies how an Ioss::DatabaseIO object will be used.
Definition: Ioss_DBUsage.h:40
int element_count() const
Definition: Iodw_DatabaseIO.h:100
Definition: Iodw_DatabaseIO.h:70
A collection of all nodes in the region.
Definition: Ioss_NodeBlock.h:53
int commsetElemCount
Definition: Iodw_DatabaseIO.h:211
int commsetNodeCount
Definition: Iodw_DatabaseIO.h:210
Definition: Ioss_Map.h:52
Definition: Ioss_CommSet.h:51
Definition: Iodw_DatabaseIO.h:81
A namespace for the pamgen database format.
Definition: Iodw_DatabaseIO.C:79
int spatialDimension
Definition: Iodw_DatabaseIO.h:198
int node_count() const
Definition: Iodw_DatabaseIO.h:98
A grouping entity that contains other grouping entities.
Definition: Ioss_Region.h:98
A collection of element sides.
Definition: Ioss_SideSet.h:59
Holds metadata for bulk data associated with a GroupingEntity.
Definition: Ioss_Field.h:47
int MPI_Comm
Definition: Ioss_CodeTypes.h:79
bool end__(Ioss::State state) override
Definition: Iodw_DatabaseIO.h:114
A collection of Ioss::Property objects.
Definition: Ioss_PropertyManager.h:49
std::vector< char > data
Definition: Ioss_Utils.C:78
A collection of element edges with the same topology.
Definition: Ioss_EdgeBlock.h:53
int sidesetCount
Definition: Iodw_DatabaseIO.h:203
Ioss::IntVector elemCmapIds
Definition: Iodw_DatabaseIO.h:208
int maximum_symbol_length() const override
Get the length of the longest name in the database file.
Definition: Iodw_DatabaseIO.h:105