For the ubuntu1604 configuration

Robert Maynard authored Jun 01, 2020 and Kitware Robot committed Jun 01, 2020

565d5a3a

 Remove CMake workarounds for version < 3.12
Acked-by: Kitware Robot <kwrobot@kitware.com>
Merge-request: !2110

Kenneth Moreland authored May 28, 2020 and Kitware Robot committed May 28, 2020

3273f1c4 Update to AddPointField of dataset
eef30c23 Merge branch 'master' into add/hyperstructstats
1014dbf0 Fix BOV reader support in ContourTreeApp
e908826c Temporary disabled BOV reader in ContourTreeApp pending #517
8a27ff51 Merge branch 'master' into add/hyperstructstats
43e470de Fix g++ conversion warning in ContourTreeApp
a9a4736c Add BOV reader support and fix TBB settings in contour tree app
38da8dc4

 Fix TBB check bug in ContourTreeApp
...
Acked-by: Kitware Robot <kwrobot@kitware.com>
Acked-by: Kenneth Moreland <kmorel@sandia.gov>
Merge-request: !2002

Robert Maynard authored May 28, 2020 and Kitware Robot committed May 28, 2020

0f867c05

 vtkm::io::reader::BOVDataSet fix 'constructor delegates to itself'
Acked-by: Kitware Robot <kwrobot@kitware.com>
Merge-request: !2107

Nick Thompson authored May 28, 2020 and Kitware Robot committed May 28, 2020

f33578d6 Add newline to docs file.
8fe17e0a Remove DataSetFieldAdd from examples as well.
fe4f71ab

 Deprecate DataSetFieldAdd.
Acked-by: Kitware Robot <kwrobot@kitware.com>
Merge-request: !2106

Fixes #517

Robert Maynard authored May 27, 2020 and Kitware Robot committed May 27, 2020

f2b8cac0

 gitlab-ci centos7 exclude tests causing rhel8 issues
Acked-by: Kitware Robot <kwrobot@kitware.com>
Merge-request: !2098

The centos7 on rhel8 was not running the install tests
as the path to cmake/ctest wasn't valid. This causes
the causes the following issues:

1. NOT_RUN tests with REPEAT don't show up in CMake failed
output fixed by:
  cmake/cmake!4801

2. failed tests cause ctest_test to return an error code,
   which propagates to the script, which propagates to
   having ctest running the script return an error.

Robert Maynard authored May 27, 2020 and Kitware Robot committed May 27, 2020

251bd82b Significantly improve FlyingEdges performance across all devices
fa937380 Rework FlyingEdges::Pass1 to handle NUMA and CUDA requirements.
769a10b4 FlyingEdge Normal and Point generation occurs in Pass4
93d87e06

 Optimize StructuredPointGradient for non boundary points.
Acked-by: Kitware Robot <kwrobot@kitware.com>
Merge-request: !2080

Ben Boeckel authored May 26, 2020 and Kitware Robot committed May 26, 2020

0488aab2

 docs: update gitlab links to include `/-/` component
Acked-by: Kitware Robot <kwrobot@kitware.com>
Acked-by: Kenneth Moreland <kmorel@sandia.gov>
Merge-request: !2104

Allison Vacanti authored May 25, 2020 and Kitware Robot committed May 25, 2020

6c98cbc6

 Add missing Algorithm::Synchronize() in timer test.
Acked-by: Kitware Robot <kwrobot@kitware.com>
Merge-request: !2094

We now use SumYAxis when executing with CUDA for better memory patterns.
Instead of using the heavy Pass4/Pass4WithNormals, CUDA now uses a
2 pass approach with the second pass outputting the normals and
coordinates using with significantly less warp divergence

First the Pass1 now uses WorkletVisitPointsWithCells as it is
faster since it doesn't compute some implicit boundary / neighborhood
info.

Second we reworked the logic around using `Fill` and a conditional
write of the edge case. The requirements of SMP when on a NUMA
machine is the complete opposite of what works great with CUDA.

By doing this in pass 4 we can remove numerous boundary condition
checks, improving the algorithm performance

We can remove lots of clamp calls by checking if we are on
a boundary and using a non-clamped API.

Kenneth Moreland authored May 21, 2020 and Kitware Robot committed May 21, 2020

e9028f5f

 Add dashboard using VTK types
Acked-by: Kitware Robot <kwrobot@kitware.com>
Acked-by: Robert Maynard <robert.maynard@kitware.com>
Merge-request: !2103

Kenneth Moreland authored May 21, 2020 and Kitware Robot committed May 21, 2020

5498ecd3 Properly handle global (whole mesh) fields in data set filters
f8fd0ce3 Silence warning about cast losing precision
3c4e8a2e Convert filters to use precompiled field map functions where applicable
98f20ec2 Use a worklet to permute fields rather than ArrayHandlePermutation
4a5dbb65 Convert CleanGrid (and dependents) to use precompiled field map
2383a7ff Add MapFieldPermutation function
b1f288aa Add non-templated base class to Keys class.
934732bb

 Add MapFieldPermutation function
Acked-by: Kitware Robot <kwrobot@kitware.com>
Acked-by: Robert Maynard <robert.maynard@kitware.com>
Merge-request: !1954

When VTK compiles VTK-m for inclusion as an accelerator library, it sets
an option to compile filters and other components for a different (and
expanded) set of common types. We should test this configuration.

Generally, fields that have a WHOLE_MESH association might be valid even
if the structure of the mesh changes. Thus, it makes sense for filters
to pass this data pretty much all the time.

Also cleaned up some code and comments to make the relationship between
`MapFieldOntoOutput` and `DoMapField` more clear.

When using math operators on small integers, the numbers are promoted to
32-bit ints. If that is set back to the same type, then some compilers
give a warning. This is annoying and pointless when dealing with
templated types, but we have to deal with it.

According to talks with Rob Maynard, using a worklet should be
(counterintuitively) faster than using ArrayHandlePermutation with
ArrayCopy.

This change also gives an opportunity to handle invalid indices, which
may be intentionally set when no mapping is available for that value.
For this case, MapFieldPermutation now takes an invalidValue argument to
set such values.

This function is compiled into the vtkm_filter library, so all filters
can implement this type of mapping without providing their own version
of compiling it.

Because we only compile it once, we provide more types to convert.
Hopefully the total compile time balances out.

The only reason Keys has a template is so that it can hold a UniqueKeys
array and provide the key for each group. If that is not needed and you
want to implement a library function that takes a keys object, you can
now grab the Keys superclass KeysBase. KeysBase is not templated, so you
can pass it to a standard method in a library.

This function is compiled into the vtkm_filter library, so all filters
can implement this type of mapping without providing their own version
of compiling it.

Because we only compile it once, we provide more types to convert.
Hopefully the total compile time balances out.

Robert Maynard authored May 21, 2020 and Kitware Robot committed May 21, 2020

9dd7b8b4

 filter::ImageMedian can be used in multiple compilation units
Acked-by: Kitware Robot <kwrobot@kitware.com>
Merge-request: !2102

Kenneth Moreland authored May 20, 2020 and Kitware Robot committed May 20, 2020

544a078c Remove use of deprecated policies in examples
06f5119c Fix deprecation warning
f29a4712 Correct field types for ComputeMoments filter
a20ec03d Disable proxies in filter benchmark
72cd0107

 Deprecate Execute with policy
Acked-by: Kitware Robot <kwrobot@kitware.com>
Acked-by: Robert Maynard <robert.maynard@kitware.com>
Merge-request: !2093

Matt Larsen authored May 20, 2020 and Kitware Robot committed May 20, 2020

10dc96cb Remove extra count variable
536249f6 Merge remote-tracking branch 'upstream/master' into lagrangian_bugfix
51984478

 Fix order of initialized seeds to match output format
Acked-by: Kitware Robot <kwrobot@kitware.com>
Acked-by: Matt Larsen <larsen30@llnl.gov>
Merge-request: !2084