ENH: Added Uncrustify support

Use config based on https://gist.github.com/mkroman/1372117

Base/Core/imstkModule.cpp

 /*=========================================================================
 
-  Library: iMSTK
+   Library: iMSTK
 
-  Copyright (c) Kitware, Inc. & Center for Modeling, Simulation,
-  & Imaging in Medicine, Rensselaer Polytechnic Institute.
+   Copyright (c) Kitware, Inc. & Center for Modeling, Simulation,
+   & Imaging in Medicine, Rensselaer Polytechnic Institute.
 
-  Licensed under the Apache License, Version 2.0 (the "License");
-  you may not use this file except in compliance with the License.
-  You may obtain a copy of the License at
+   Licensed under the Apache License, Version 2.0 (the "License");
+   you may not use this file except in compliance with the License.
+   You may obtain a copy of the License at
 
       http://www.apache.org/licenses/LICENSE-2.0.txt
 
-  Unless required by applicable law or agreed to in writing, software
-  distributed under the License is distributed on an "AS IS" BASIS,
-  WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
-  See the License for the specific language governing permissions and
-  limitations under the License.
+   Unless required by applicable law or agreed to in writing, software
+   distributed under the License is distributed on an "AS IS" BASIS,
+   WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+   See the License for the specific language governing permissions and
+   limitations under the License.
 
-=========================================================================*/
+   =========================================================================*/
 
 #include "imstkModule.h"
 
 #include <iostream>
 
 namespace imstk {
-
 void Module::exec()
 {
     m_status = ModuleStatus::RUNNING;
     this->initModule();
-    while( m_status !=  ModuleStatus::TERMINATING )
+
+    while (m_status !=  ModuleStatus::TERMINATING)
     {
-      if( m_status == ModuleStatus::RUNNING )
-      {
-          this->runModule();
-      }
+        if (m_status == ModuleStatus::RUNNING)
+        {
+            this->runModule();
+        }
     }
     this->cleanUpModule();
     m_status = ModuleStatus::INACTIVE;
@@ -42,56 +42,62 @@ void Module::exec()
 
 void Module::run()
 {
-    switch(m_status)
+    switch (m_status)
     {
-    case ModuleStatus::PAUSED :
+    case ModuleStatus::PAUSED:
         m_status = ModuleStatus::RUNNING;
         break;
-    case ModuleStatus::RUNNING :
-        std::cerr << "Can not run " << m_name <<std::endl
-                  << "Module already running." <<std::endl;
+
+    case ModuleStatus::RUNNING:
+        std::cerr << "Can not run " << m_name << std::endl
+                  << "Module already running." << std::endl;
         break;
-    default :
-        std::cerr << "Can not run " << m_name <<std::endl
+
+    default:
+        std::cerr << "Can not run " << m_name << std::endl
                   << "Module terminating or not active."
-                  << "Run `module::exec()` to launch your module." <<std::endl;
+                  << "Run `module::exec()` to launch your module." << std::endl;
         break;
     }
 }
 
 void Module::pause()
 {
-    switch(m_status)
+    switch (m_status)
     {
-    case ModuleStatus::RUNNING :
+    case ModuleStatus::RUNNING:
         m_status = ModuleStatus::PAUSED;
         break;
-    case ModuleStatus::PAUSED :
-        std::cerr << "Can not pause " << m_name <<std::endl
-                  << "Module already running." <<std::endl;
+
+    case ModuleStatus::PAUSED:
+        std::cerr << "Can not pause " << m_name << std::endl
+                  << "Module already running." << std::endl;
         break;
-    default :
-        std::cerr << "Can not pause " << m_name <<std::endl
+
+    default:
+        std::cerr << "Can not pause " << m_name << std::endl
                   << "Module terminating or not active."
-                  << "Run `module::exec()` to launch your module." <<std::endl;
+                  << "Run `module::exec()` to launch your module." << std::endl;
         break;
     }
 }
 
 void Module::terminate()
 {
-    switch(m_status)
+    switch (m_status)
     {
-    case ModuleStatus::TERMINATING :
-        std::cerr << "Can not terminate " << m_name <<std::endl
-                  << "Module already terminating." <<std::endl;
+    case ModuleStatus::TERMINATING:
+        std::cerr << "Can not terminate " << m_name << std::endl
+                  << "Module already terminating." << std::endl;
         break;
-    case ModuleStatus::INACTIVE :
-        std::cerr << "Can not terminate " << m_name <<std::endl
+
+    case ModuleStatus::INACTIVE:
+        std::cerr << "Can not terminate " << m_name << std::endl
                   << "Module not active."
-                  << "Run `module::exec()` to launch your module." <<std::endl;
+                  << "Run `module::exec()` to launch your module." << std::endl;
         break;
-    default :
+
+    default:
         m_status = ModuleStatus::TERMINATING;
         break;
     }
@@ -106,5 +112,4 @@ const std::string& Module::getName() const
 {
     return m_name;
 }
-
 }

Base/Core/imstkModule.h

 /*=========================================================================
 
-  Library: iMSTK
+   Library: iMSTK
 
-  Copyright (c) Kitware, Inc. & Center for Modeling, Simulation,
-  & Imaging in Medicine, Rensselaer Polytechnic Institute.
+   Copyright (c) Kitware, Inc. & Center for Modeling, Simulation,
+   & Imaging in Medicine, Rensselaer Polytechnic Institute.
 
-  Licensed under the Apache License, Version 2.0 (the "License");
-  you may not use this file except in compliance with the License.
-  You may obtain a copy of the License at
+   Licensed under the Apache License, Version 2.0 (the "License");
+   you may not use this file except in compliance with the License.
+   You may obtain a copy of the License at
 
       http://www.apache.org/licenses/LICENSE-2.0.txt
 
-  Unless required by applicable law or agreed to in writing, software
-  distributed under the License is distributed on an "AS IS" BASIS,
-  WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
-  See the License for the specific language governing permissions and
-  limitations under the License.
+   Unless required by applicable law or agreed to in writing, software
+   distributed under the License is distributed on an "AS IS" BASIS,
+   WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+   See the License for the specific language governing permissions and
+   limitations under the License.
 
-=========================================================================*/
+   =========================================================================*/
 
 #ifndef imstkModule_h
 #define imstkModule_h
@@ -25,7 +25,6 @@
 #include <iostream>
 
 namespace imstk {
-
 enum class ModuleStatus
 {
     INACTIVE,
@@ -37,27 +36,28 @@ enum class ModuleStatus
 class Module
 {
 public:
+
     ~Module() = default;
 
-    void exec();
-    void run();
-    void pause();
-    void terminate();
+    void                exec();
+    void                run();
+    void                pause();
+    void                terminate();
 
     const ModuleStatus& getStatus() const;
-    const std::string& getName() const;
+    const std::string & getName() const;
 
 protected:
+
     Module(std::string name) : m_name(name) {}
 
-    virtual void initModule() = 0;
-    virtual void runModule() = 0;
+    virtual void initModule()    = 0;
+    virtual void runModule()     = 0;
     virtual void cleanUpModule() = 0;
 
     ModuleStatus m_status = ModuleStatus::INACTIVE;
-    std::string m_name;
+    std::string  m_name;
 };
-
 }
 
-#endif
+#endif // ifndef imstkModule_h

Base/Scene/imstkScene.cpp

 /*=========================================================================
 
-  Library: iMSTK
+   Library: iMSTK
 
-  Copyright (c) Kitware, Inc. & Center for Modeling, Simulation,
-  & Imaging in Medicine, Rensselaer Polytechnic Institute.
+   Copyright (c) Kitware, Inc. & Center for Modeling, Simulation,
+   & Imaging in Medicine, Rensselaer Polytechnic Institute.
 
-  Licensed under the Apache License, Version 2.0 (the "License");
-  you may not use this file except in compliance with the License.
-  You may obtain a copy of the License at
+   Licensed under the Apache License, Version 2.0 (the "License");
+   you may not use this file except in compliance with the License.
+   You may obtain a copy of the License at
 
       http://www.apache.org/licenses/LICENSE-2.0.txt
 
-  Unless required by applicable law or agreed to in writing, software
-  distributed under the License is distributed on an "AS IS" BASIS,
-  WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
-  See the License for the specific language governing permissions and
-  limitations under the License.
+   Unless required by applicable law or agreed to in writing, software
+   distributed under the License is distributed on an "AS IS" BASIS,
+   WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+   See the License for the specific language governing permissions and
+   limitations under the License.
 
-=========================================================================*/
+   =========================================================================*/
 
 #include "imstkScene.h"
 
 namespace imstk {
-
 void Scene::initModule()
 {
-    std::cout<<std::endl<<m_name<<" : init"<<std::endl;
+    std::cout << std::endl << m_name << " : init" << std::endl;
 }
 
 void Scene::cleanUpModule()
 {
-    std::cout<<std::endl<<m_name<<" : cleanUp"<<std::endl;
+    std::cout << std::endl << m_name << " : cleanUp" << std::endl;
 }
 
 void Scene::runModule()
 {
-    std::cout<<"."<<std::flush;
+    std::cout << "." << std::flush;
 }
-
 }

Base/Scene/imstkScene.h

 /*=========================================================================
 
-  Library: iMSTK
+   Library: iMSTK
 
-  Copyright (c) Kitware, Inc. & Center for Modeling, Simulation,
-  & Imaging in Medicine, Rensselaer Polytechnic Institute.
+   Copyright (c) Kitware, Inc. & Center for Modeling, Simulation,
+   & Imaging in Medicine, Rensselaer Polytechnic Institute.
 
-  Licensed under the Apache License, Version 2.0 (the "License");
-  you may not use this file except in compliance with the License.
-  You may obtain a copy of the License at
+   Licensed under the Apache License, Version 2.0 (the "License");
+   you may not use this file except in compliance with the License.
+   You may obtain a copy of the License at
 
       http://www.apache.org/licenses/LICENSE-2.0.txt
 
-  Unless required by applicable law or agreed to in writing, software
-  distributed under the License is distributed on an "AS IS" BASIS,
-  WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
-  See the License for the specific language governing permissions and
-  limitations under the License.
+   Unless required by applicable law or agreed to in writing, software
+   distributed under the License is distributed on an "AS IS" BASIS,
+   WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+   See the License for the specific language governing permissions and
+   limitations under the License.
 
-=========================================================================*/
+   =========================================================================*/
 
 #ifndef imstkScene_h
 #define imstkScene_h
@@ -27,11 +27,12 @@
 #include "imstkModule.h"
 
 namespace imstk {
-
 class Scene : public Module
 {
 public:
-    Scene(std::string name) : Module(name){}
+
+    Scene(std::string name) : Module(name) {}
+
     ~Scene() = default;
 
 protected:
@@ -39,9 +40,7 @@ protected:
     void initModule() override;
     void runModule() override;
     void cleanUpModule() override;
-
 };
-
 }
 
-#endif
+#endif // ifndef imstkScene_h

Base/SimulationManager/imstkSimulationManager.cpp

 /*=========================================================================
 
-  Library: iMSTK
+   Library: iMSTK
 
-  Copyright (c) Kitware, Inc. & Center for Modeling, Simulation,
-  & Imaging in Medicine, Rensselaer Polytechnic Institute.
+   Copyright (c) Kitware, Inc. & Center for Modeling, Simulation,
+   & Imaging in Medicine, Rensselaer Polytechnic Institute.
 
-  Licensed under the Apache License, Version 2.0 (the "License");
-  you may not use this file except in compliance with the License.
-  You may obtain a copy of the License at
+   Licensed under the Apache License, Version 2.0 (the "License");
+   you may not use this file except in compliance with the License.
+   You may obtain a copy of the License at
 
       http://www.apache.org/licenses/LICENSE-2.0.txt
 
-  Unless required by applicable law or agreed to in writing, software
-  distributed under the License is distributed on an "AS IS" BASIS,
-  WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
-  See the License for the specific language governing permissions and
-  limitations under the License.
+   Unless required by applicable law or agreed to in writing, software
+   distributed under the License is distributed on an "AS IS" BASIS,
+   WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+   See the License for the specific language governing permissions and
+   limitations under the License.
 
-=========================================================================*/
+   =========================================================================*/
 
 #include "imstkSimulationManager.h"
 
-namespace imstk {
-
-}
+namespace imstk {}

Base/SimulationManager/imstkSimulationManager.h

 /*=========================================================================
 
-  Library: iMSTK
+   Library: iMSTK
 
-  Copyright (c) Kitware, Inc. & Center for Modeling, Simulation,
-  & Imaging in Medicine, Rensselaer Polytechnic Institute.
+   Copyright (c) Kitware, Inc. & Center for Modeling, Simulation,
+   & Imaging in Medicine, Rensselaer Polytechnic Institute.
 
-  Licensed under the Apache License, Version 2.0 (the "License");
-  you may not use this file except in compliance with the License.
-  You may obtain a copy of the License at
+   Licensed under the Apache License, Version 2.0 (the "License");
+   you may not use this file except in compliance with the License.
+   You may obtain a copy of the License at
 
       http://www.apache.org/licenses/LICENSE-2.0.txt
 
-  Unless required by applicable law or agreed to in writing, software
-  distributed under the License is distributed on an "AS IS" BASIS,
-  WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
-  See the License for the specific language governing permissions and
-  limitations under the License.
+   Unless required by applicable law or agreed to in writing, software
+   distributed under the License is distributed on an "AS IS" BASIS,
+   WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+   See the License for the specific language governing permissions and
+   limitations under the License.
 
-=========================================================================*/
+   =========================================================================*/
 
 #ifndef imstkSimulationManager_h
 #define imstkSimulationManager_h
@@ -30,20 +30,20 @@
 
 
 namespace imstk {
-
 class SimulationManager
 {
 public:
+
     ~SimulationManager() = default;
 
 private:
+
     SimulationManager() = default;
 
-    std::map<std::string, std::shared_ptr<Scene>> sceneMap;
+    std::map<std::string, std::shared_ptr<Scene> > sceneMap;
     std::size_t activeSceneID;
     std::vector<std::thread> threads;
 };
-
 }
 
-#endif
+#endif // ifndef imstkSimulationManager_h