This is a follow up of commit r21499

List can't be passed directly to ExternalProject, they have to be converted
to string with a separator different from ";".

The function "list_to_string" allows to easily convert list to string
using a given separator.

From: jcfr <jcfr@3bd1e089-480b-0410-8dfb-8563597acbee>

git-svn-id: http://svn.slicer.org/Slicer4/branches/Slicer-4-2@21512 3bd1e089-480b-0410-8dfb-8563597acbee

This will avoid CMake "unused variable" warning when using generator that
don't support multiple config. (i.e Makefile)

From: jcfr <jcfr@3bd1e089-480b-0410-8dfb-8563597acbee>

git-svn-id: http://svn.slicer.org/Slicer4/branches/Slicer-4-2@21511 3bd1e089-480b-0410-8dfb-8563597acbee

git-svn-id: http://svn.slicer.org/Slicer4/branches/Slicer-4-2@21509 3bd1e089-480b-0410-8dfb-8563597acbee

git-svn-id: http://svn.slicer.org/Slicer4/branches/Slicer-4-2@21508 3bd1e089-480b-0410-8dfb-8563597acbee

git-svn-id: http://svn.slicer.org/Slicer4/branches/Slicer-4-2@21507 3bd1e089-480b-0410-8dfb-8563597acbee

Additionally, the script will now ensure that the project is checked out
in either Continuous, Experimental or Nightly sub directory.

git-svn-id: http://svn.slicer.org/Slicer4/branches/Slicer-4-2@21505 3bd1e089-480b-0410-8dfb-8563597acbee

While using the Volume Rendering module, qDebug reports many lines containing
Default: "" on stdout.
This polluted the console with unnecessary lines.

git-svn-id: http://svn.slicer.org/Slicer4/branches/Slicer-4-2@21504 3bd1e089-480b-0410-8dfb-8563597acbee

By including only a single configuration type, visual studio
will bring that up by default.  This helps when building
release on windows, since you can restrict the projects to
only support release and avoid getting builds with both
libraries by mistake.  By passing this to the slicer project
you can open that and build without needing to remember to
change the build type.

git-svn-id: http://svn.slicer.org/Slicer4/branches/Slicer-4-2@21503 3bd1e089-480b-0410-8dfb-8563597acbee

git-svn-id: http://svn.slicer.org/Slicer4/branches/Slicer-4-2@21502 3bd1e089-480b-0410-8dfb-8563597acbee

Thanks to Bill Lorensen, Alex Yarmarkovich and Csaba Pinter for pointing
out the problem.

To provide some background:

  While working on the commit r21482 that introduced the problem, the
variable was automatically initialized to 0 on my workstattion and I didn't
 face the issue.

  Having valgrind reporting uninitialized variable on the dashboard would
also be helpful.

From: jcfr <jcfr@3bd1e089-480b-0410-8dfb-8563597acbee>

git-svn-id: http://svn.slicer.org/Slicer4/branches/Slicer-4-2@21493 3bd1e089-480b-0410-8dfb-8563597acbee

Function is named "userRevisionSettings()" and associated member is now
named "RevisionUserSettings" instead of "RevisionSpecificUserSettings"

From: Jean-Christophe Fillion-Robin <jchris.fillionr@kitware.com>

git-svn-id: http://svn.slicer.org/Slicer4/branches/Slicer-4-2@21492 3bd1e089-480b-0410-8dfb-8563597acbee

There is now a clear distinction between:
 - userSettings -> i.e. ~/.config/NA-MIC/Slicer.ini
 - revisionUserSettings -> i.e. ~/.config/NA-MIC/Slicer-<revision>.ini

The following slicer settings are now revision specific:
 - Extensions/ManagerEnabled
 - Extensions/ServerUrl
 - Extensions/InstallPath
 - Modules/AdditonalPath
 - Modules/IgnoreModules

Additionally, the launcher version has also been updated to be able to
consider settings associated with a user, application and revision. This is
captured by the new parameter APPLICATION_REVISION, ORGANIZATION_DOMAIN,
ORGANIZATION_NAME and USER_ADDITIONAL_SETTINGS_FILEBASENAME passed to the CMake
function "ctkAppLauncherConfigure".

qSlicerCoreApplication API has also been extended and now includes methods
like:
  - QSettings* userSettings()  [settings() method is deprecated and kept for backward compatibility]
  - QSettings* revisionUserSettings()
  - QString launcherRevisionUserSettingsFilePath()
  - QString slicerUserSettingsFilePath()
  - QString slicerRevisionUserSettingsFilePath()

In addition to the settings, the extensions install path is also revision
specific, it means that it's now possible to have multiple version of slicer
running with different set of extensions.

Fixes #2791, #2143, #2720, #2533

Since the version of the launcher is updated, launcher will return EXIT_FAILURE
also when no application is been set in the launcher settings.

Fixes #2767

From: jcfr <jcfr@3bd1e089-480b-0410-8dfb-8563597acbee>

git-svn-id: http://svn.slicer.org/Slicer4/branches/Slicer-4-2@21489 3bd1e089-480b-0410-8dfb-8563597acbee

Similar role is now fulfilled by https://github.com/commontk/PythonQt/blob/patched-2/src/PythonQtPythonInclude.h

From: jcfr <jcfr@3bd1e089-480b-0410-8dfb-8563597acbee>

git-svn-id: http://svn.slicer.org/Slicer4/branches/Slicer-4-2@21488 3bd1e089-480b-0410-8dfb-8563597acbee

From: jcfr <jcfr@3bd1e089-480b-0410-8dfb-8563597acbee>

git-svn-id: http://svn.slicer.org/Slicer4/branches/Slicer-4-2@21487 3bd1e089-480b-0410-8dfb-8563597acbee

From: jcfr <jcfr@3bd1e089-480b-0410-8dfb-8563597acbee>

git-svn-id: http://svn.slicer.org/Slicer4/branches/Slicer-4-2@21486 3bd1e089-480b-0410-8dfb-8563597acbee

Only respond to InteractionEvents from the widget when the
seed widget is in MovingSeed mode.

From: pieper <pieper@3bd1e089-480b-0410-8dfb-8563597acbee>

git-svn-id: http://svn.slicer.org/Slicer4/branches/Slicer-4-2@21485 3bd1e089-480b-0410-8dfb-8563597acbee

Needed to call Initialize on the ruler to add the needed display nodes.

Issue #1406

From: naucoin <naucoin@3bd1e089-480b-0410-8dfb-8563597acbee>

git-svn-id: http://svn.slicer.org/Slicer4/branches/Slicer-4-2@21484 3bd1e089-480b-0410-8dfb-8563597acbee

See issue #2811

From: pieper <pieper@3bd1e089-480b-0410-8dfb-8563597acbee>

git-svn-id: http://svn.slicer.org/Slicer4/branches/Slicer-4-2@21483 3bd1e089-480b-0410-8dfb-8563597acbee

git-svn-id: http://svn.slicer.org/Slicer4/branches/Slicer-4-2@21474 3bd1e089-480b-0410-8dfb-8563597acbee

Closes #2797

git-svn-id: http://svn.slicer.org/Slicer4/branches/Slicer-4-2@21472 3bd1e089-480b-0410-8dfb-8563597acbee

Add patch that fixes GCC 4.7 -O3 test failures.

git-svn-id: http://svn.slicer.org/Slicer4/branches/Slicer-4-2@21471 3bd1e089-480b-0410-8dfb-8563597acbee

git-svn-id: http://svn.slicer.org/Slicer4/branches/Slicer-4-2@21470 3bd1e089-480b-0410-8dfb-8563597acbee

BUG 2769, 1536. Fixed showing of slice intersections, made it more efficient. Full vtkMRMLModelSliceDisplayableManager::UpdateFromMRML() is only called when batch processing is done.

git-svn-id: http://svn.slicer.org/Slicer4/branches/Slicer-4-2@21469 3bd1e089-480b-0410-8dfb-8563597acbee

git-svn-id: http://svn.slicer.org/Slicer4/branches/Slicer-4-2@21468 3bd1e089-480b-0410-8dfb-8563597acbee

Patch backported to ITK release-3.20 branch.

See http://na-mic.org/Mantis/view.php?id=1900

Fixes 1900

git-svn-id: http://svn.slicer.org/Slicer4/branches/Slicer-4-2@21467 3bd1e089-480b-0410-8dfb-8563597acbee

Re-configuring of non cmake-ified project was causing the rebuild of
VTK, CTK and Slicer. For example, in case of python, the headers were
re-installed, the associated timestamp updated ... hence the recompilation
of VTK.

From: jcfr <jcfr@3bd1e089-480b-0410-8dfb-8563597acbee>

git-svn-id: http://svn.slicer.org/Slicer4/branches/Slicer-4-2@21459 3bd1e089-480b-0410-8dfb-8563597acbee

Non-ASCII characters make compilation difficult on issue
compiler warnings.  In addition, the non-ascii characters confuse
some code generation tools (i.e. autogenerating python wrappings for
nipype).

From: hjohnson <hjohnson@3bd1e089-480b-0410-8dfb-8563597acbee>

git-svn-id: http://svn.slicer.org/Slicer4/branches/Slicer-4-2@21458 3bd1e089-480b-0410-8dfb-8563597acbee

See #2513

From: jcfr <jcfr@3bd1e089-480b-0410-8dfb-8563597acbee>

git-svn-id: http://svn.slicer.org/Slicer4/branches/Slicer-4-2@21455 3bd1e089-480b-0410-8dfb-8563597acbee

* Print line number

* Each sub test is now in his dedicated scope

* More verbose output by displaying value of the test condition

From: jcfr <jcfr@3bd1e089-480b-0410-8dfb-8563597acbee>

git-svn-id: http://svn.slicer.org/Slicer4/branches/Slicer-4-2@21454 3bd1e089-480b-0410-8dfb-8563597acbee

Unset ITK_AUTOLOAD_PATH environment variable to prevent the CLI from
loading the itkMRMLIDIOPlugin plugin because executable CLIs read images
from file and not from shared memory. Worst the plugin in the CLI
could clash by loading libraries (ITK, VTK, MRML) other than the
statically linked to the executable.
Historically, there was an nvidia driver bug that causes the module
to fail on exit with undefined symbol.

Regression from r12053 (always broken in Slicer4, works in Slicer3)

Issues #2773 #1635

From: finetjul <finetjul@3bd1e089-480b-0410-8dfb-8563597acbee>

git-svn-id: http://svn.slicer.org/Slicer4/branches/Slicer-4-2@21453 3bd1e089-480b-0410-8dfb-8563597acbee

This change probably speeds things up to - the issue is that without
this change items in the model are being updated while the scene
is in an inconsistent state.  From testing by me and Nicole we saw
no side effects of this call and it allows the brain atlas to
run to completion, although it still crashes when closing the scene
(in a SceneView destructor) which means I believe it is now
the same as issue #2512.

git-svn-id: http://svn.slicer.org/Slicer4/branches/Slicer-4-2@21447 3bd1e089-480b-0410-8dfb-8563597acbee

git-svn-id: http://svn.slicer.org/Slicer4/branches/Slicer-4-2@21446 3bd1e089-480b-0410-8dfb-8563597acbee

git-svn-id: http://svn.slicer.org/Slicer4/branches/Slicer-4-2@21439 3bd1e089-480b-0410-8dfb-8563597acbee

Previous commit was incorrectly creating version 4.2.2

git-svn-id: http://svn.slicer.org/Slicer4/branches/Slicer-4-2@21438 3bd1e089-480b-0410-8dfb-8563597acbee

git-svn-id: http://svn.slicer.org/Slicer4/branches/Slicer-4-2@21437 3bd1e089-480b-0410-8dfb-8563597acbee

Suggested by Steve Pieper
Contributed by Jim Miller

Moved the LightBoxRendererManagerProxy up to the superclass of the
DisplayableManager hierarchy so that all (2D & 3D) displayable managers
can interact with a lightbox.

Note that light boxes are only currently supported on 2D viewers, so the
proxy is only configured in qMRMLSliceView. CTK will need to be changed to
put the LightBoxManager into ctkVTKAbstractView to make it accessible to
both ctkVTKSliceView and ctkVTKRenderView. Then qMRMLThreeDView could also
create and initialize a LightBoxManagerProxy and set it on its DisplayableManagers.
Here, we would also want to move qMRMLSliceViewPrivate::vtkInternalLightBoxRendererManagerProxy
class to a place where it could be used by both types of VTK widgets.

The proxy can now be set on the DisplayableManagerGroup which
broadcasts the proxy to all the DisplayableManagers in that group.

See http://www.na-mic.org/Bug/view.php?id=2732

Fixes #2732

From: jcfr <jcfr@3bd1e089-480b-0410-8dfb-8563597acbee>

git-svn-id: http://svn.slicer.org/Slicer4/branches/Slicer-4-2@21436 3bd1e089-480b-0410-8dfb-8563597acbee

When the properties node is modified, the event must be propagated so that
the 3D and 2D displayable managers are notified and trigger a refresh.

Closes #2374

From: finetjul <finetjul@3bd1e089-480b-0410-8dfb-8563597acbee>

git-svn-id: http://svn.slicer.org/Slicer4/branches/Slicer-4-2@21435 3bd1e089-480b-0410-8dfb-8563597acbee

When display nodes where added to a volume node,
vtkMRMLVolumeGlyphSliceDisplayableManager was not notified so it couldn't
observe the glyph diffusion tendor display node modify event.

Issue #2374

From: finetjul <finetjul@3bd1e089-480b-0410-8dfb-8563597acbee>

git-svn-id: http://svn.slicer.org/Slicer4/branches/Slicer-4-2@21434 3bd1e089-480b-0410-8dfb-8563597acbee

...that has display nodes with a non null output polydata.

Issue #2374

Conflicts:
	Libs/MRML/DisplayableManager/vtkMRMLModelDisplayableManager.cxx

From: finetjul <finetjul@3bd1e089-480b-0410-8dfb-8563597acbee>

git-svn-id: http://svn.slicer.org/Slicer4/branches/Slicer-4-2@21433 3bd1e089-480b-0410-8dfb-8563597acbee