It measures time spent by some scene actions such as loading, closing,
restoring, relayouting a scene or modifying/adding nodes.
Issue #2642

Example of performance on a MacBookPro laptop (2.4GHz):
AddData (BrainAtlas2012.mrb) took 44865 msecs
CloseScene () took 28706 msecs
AddData (BrainAtlas2012.mrb) took 44579 msecs
ModifyNode (vtkMRMLScalarVolumeNode1) took 4 msecs
ModifyNode (vtkMRMLScalarVolumeNode2) took 35 msecs
ModifyNode (vtkMRMLScalarVolumeNode3) took 20 msecs
ModifyNode (vtkMRMLModelHierarchyNode2) took 14 msecs
ModifyNode (vtkMRMLModelNode4) took 0 msecs
ModifyNode (vtkMRMLModelDisplayNode5) took 14 msecs
ModifyNode (vtkMRMLModelHierarchyNode3) took 13 msecs
ModifyNode (vtkMRMLModelStorageNode1) took 4 msecs
ModifyNode (vtkMRMLModelHierarchyNode301) took 18 msecs
ModifyNode (vtkMRMLModelDisplayNode304) took 23 msecs
ModifyNode (vtkMRMLModelHierarchyNode51) took 19 msecs
AddNode (vtkMRMLModelNode302) took 46 msecs

git-svn-id: http://svn.slicer.org/Slicer4/trunk@21579 3bd1e089-480b-0410-8dfb-8563597acbee

git-svn-id: http://svn.slicer.org/Slicer4/trunk@21578 3bd1e089-480b-0410-8dfb-8563597acbee

BUG: Corrected bug 2381 the DTI volume glyphs now use the correct color map when in color by orientation mode

git-svn-id: http://svn.slicer.org/Slicer4/trunk@21577 3bd1e089-480b-0410-8dfb-8563597acbee

git-svn-id: http://svn.slicer.org/Slicer4/trunk@21576 3bd1e089-480b-0410-8dfb-8563597acbee

git-svn-id: http://svn.slicer.org/Slicer4/trunk@21575 3bd1e089-480b-0410-8dfb-8563597acbee

The message "File ... qSlicerBaseQTCore_fr.qm" doesn't exist."
won't occur anymore when starting Slicer.

See http://www.na-mic.org/Bug/view.php?id=2863

Fixes #2863

git-svn-id: http://svn.slicer.org/Slicer4/trunk@21574 3bd1e089-480b-0410-8dfb-8563597acbee

git-svn-id: http://svn.slicer.org/Slicer4/trunk@21573 3bd1e089-480b-0410-8dfb-8563597acbee

git-svn-id: http://svn.slicer.org/Slicer4/trunk@21572 3bd1e089-480b-0410-8dfb-8563597acbee

Since github.com deprecated its download api [1], the launcher packages
have been uploaded on packages.kitware.com.

[1] https://github.com/blog/1302-goodbye-uploads

git-svn-id: http://svn.slicer.org/Slicer4/trunk@21571 3bd1e089-480b-0410-8dfb-8563597acbee

git-svn-id: http://svn.slicer.org/Slicer4/trunk@21570 3bd1e089-480b-0410-8dfb-8563597acbee

git-svn-id: http://svn.slicer.org/Slicer4/trunk@21569 3bd1e089-480b-0410-8dfb-8563597acbee

git-svn-id: http://svn.slicer.org/Slicer4/trunk@21568 3bd1e089-480b-0410-8dfb-8563597acbee

The generated XTK code is now compatible with the slightly new API and linking against the tag of release 9 should ensure stability in the future.



git-svn-id: http://svn.slicer.org/Slicer4/trunk@21567 3bd1e089-480b-0410-8dfb-8563597acbee

Fixes #2848

git-svn-id: http://svn.slicer.org/Slicer4/trunk@21566 3bd1e089-480b-0410-8dfb-8563597acbee

git-svn-id: http://svn.slicer.org/Slicer4/trunk@21565 3bd1e089-480b-0410-8dfb-8563597acbee

Avoid a degenerate transform by checking for null column
and replacing it with the cross product.  This can happen
when the ijkToRAS transform is not uniquely aligned with the
cardinal axes and the algorithm to determine the correspondence
between volume axes and patient axes fails.

git-svn-id: http://svn.slicer.org/Slicer4/trunk@21564 3bd1e089-480b-0410-8dfb-8563597acbee

BUG 2764. Made vtkMRMLSceneViewNode handle node ids cache: NodeIDs. Restructured handling of  NodeIDs in the vtkMRMLScene

git-svn-id: http://svn.slicer.org/Slicer4/trunk@21563 3bd1e089-480b-0410-8dfb-8563597acbee

git-svn-id: http://svn.slicer.org/Slicer4/trunk@21562 3bd1e089-480b-0410-8dfb-8563597acbee

Note that it does not fix the import of annotation hierarchies.
For some reasons (see vtkSlicerAnnotationModuleLogic::OnSceneNodeAdded),
the hierarchies are automatically loaded into the wrong hierarchy node
parent.
Issue #2849

git-svn-id: http://svn.slicer.org/Slicer4/trunk@21561 3bd1e089-480b-0410-8dfb-8563597acbee

git-svn-id: http://svn.slicer.org/Slicer4/trunk@21560 3bd1e089-480b-0410-8dfb-8563597acbee

Moved loadTranslations() and loadLanguage() methods from qSlicerApplicationHelper
to qSlicerCoreApplication. This enables loading them before instantiating the
main Slicer GUI.
Many thanks to zengwenye <iamzengwenye@163.com> for submitting the patch.
Fixes issue 2836

git-svn-id: http://svn.slicer.org/Slicer4/trunk@21559 3bd1e089-480b-0410-8dfb-8563597acbee

when Slicer_APPLICATIONS_DIR was defined but empty

git-svn-id: http://svn.slicer.org/Slicer4/trunk@21558 3bd1e089-480b-0410-8dfb-8563597acbee

Slicer_BUILD_EXTENSIONMANAGER_SUPPORT is OFF

git-svn-id: http://svn.slicer.org/Slicer4/trunk@21557 3bd1e089-480b-0410-8dfb-8563597acbee

Can temporarily force the filtering of a qMRMLTreeView.
Character ! on tree view switches filtering mode in debug mode.

git-svn-id: http://svn.slicer.org/Slicer4/trunk@21556 3bd1e089-480b-0410-8dfb-8563597acbee

Allows to programatically set the default action without activating
the place mode:
 - vtkMRMLSelectionNode::SetActiveAnnotationID
Don't listen to unnecessary events like ActiveAnnotationIDChangedEvent,
AnnotationIDListModifiedEvent, InteractionModePersistenceChangedEvent.
Listening to ModifiedEvent is enough.
Todo: remove the unnecessary events.

git-svn-id: http://svn.slicer.org/Slicer4/trunk@21555 3bd1e089-480b-0410-8dfb-8563597acbee

If qSlicerModulesMenu::setCurrentModule() is called before the module has
been loaded, qSlicerModulesMenu was not triggering the action which could
result in observers not being notified. (the module selection toolbar)

git-svn-id: http://svn.slicer.org/Slicer4/trunk@21554 3bd1e089-480b-0410-8dfb-8563597acbee

Categories are separated with ; character.
Empty categories are allowed (become top level)

git-svn-id: http://svn.slicer.org/Slicer4/trunk@21553 3bd1e089-480b-0410-8dfb-8563597acbee

In case where the mrml node passed is null, this code crashes.

git-svn-id: http://svn.slicer.org/Slicer4/trunk@21552 3bd1e089-480b-0410-8dfb-8563597acbee

Pass Slicer_ADDITIONAL_DEPENDENCIES to SlicerCPack.cmake for installing
the project targets.

git-svn-id: http://svn.slicer.org/Slicer4/trunk@21551 3bd1e089-480b-0410-8dfb-8563597acbee

git-svn-id: http://svn.slicer.org/Slicer4/trunk@21550 3bd1e089-480b-0410-8dfb-8563597acbee

Controls whether Diffusion related modules are built or not.
It concernes all the DWI, DTI and Tractography modules.

git-svn-id: http://svn.slicer.org/Slicer4/trunk@21549 3bd1e089-480b-0410-8dfb-8563597acbee

By passing Slicer_APPLICATIONS_DIR, the applications to build can be
changed.

git-svn-id: http://svn.slicer.org/Slicer4/trunk@21548 3bd1e089-480b-0410-8dfb-8563597acbee

HasEnoughClicks doesn't provide enough flexibility when dealing with
annotations.

git-svn-id: http://svn.slicer.org/Slicer4/trunk@21547 3bd1e089-480b-0410-8dfb-8563597acbee

git-svn-id: http://svn.slicer.org/Slicer4/trunk@21546 3bd1e089-480b-0410-8dfb-8563597acbee

Similarly to qMRMLTreeView::currentNode(), setCurrentNode abstracts
setCurrentIndex().

git-svn-id: http://svn.slicer.org/Slicer4/trunk@21545 3bd1e089-480b-0410-8dfb-8563597acbee

Sometimes we want the annotations to be parent of other annotations.

git-svn-id: http://svn.slicer.org/Slicer4/trunk@21544 3bd1e089-480b-0410-8dfb-8563597acbee

vtkMRMLAbstractLogic can now observe other logics.

git-svn-id: http://svn.slicer.org/Slicer4/trunk@21543 3bd1e089-480b-0410-8dfb-8563597acbee

git-svn-id: http://svn.slicer.org/Slicer4/trunk@21542 3bd1e089-480b-0410-8dfb-8563597acbee

Note: Annotation hierarchies have an unclickable visibility icon

Issue #2606

git-svn-id: http://svn.slicer.org/Slicer4/trunk@21541 3bd1e089-480b-0410-8dfb-8563597acbee

Some annotations (e.g. bones) can have direct parent/child relationship
in the tree view.
It shouldn't impact the existing annotations.

git-svn-id: http://svn.slicer.org/Slicer4/trunk@21540 3bd1e089-480b-0410-8dfb-8563597acbee