CMakeLists.txt 29 KB
Newer Older
1
2
3
4
5
PROJECT(Slicer3)

CMAKE_MINIMUM_REQUIRED(VERSION 2.6)
IF(COMMAND CMAKE_POLICY)
  CMAKE_POLICY(SET CMP0003 NEW)
6
  CMAKE_POLICY(SET CMP0012 NEW)
7
8
ENDIF(COMMAND CMAKE_POLICY)
MARK_AS_ADVANCED(CMAKE_BACKWARDS_COMPATIBILITY)
9

10

11
#-----------------------------------------------------------------------------
12
#
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
set(Slicer3_INSTALL_BIN_DIR "bin")
set(Slicer3_INSTALL_LIB_DIR "lib/Slicer3")
set(Slicer3_INSTALL_INCLUDE_DIR "include/Slicer3")
set(Slicer3_INSTALL_SHARE_DIR "share/Slicer3")
set(Slicer3_INSTALL_ITKFACTORIES_DIR "${Slicer3_INSTALL_LIB_DIR}/ITKFactories")

set(Slicer3_INSTALL_PLUGINS_BIN_DIR "${Slicer3_INSTALL_LIB_DIR}/Plugins")
set(Slicer3_INSTALL_PLUGINS_LIB_DIR "${Slicer3_INSTALL_LIB_DIR}/Plugins")
set(Slicer3_INSTALL_PLUGINS_INCLUDE_DIR "${Slicer3_INSTALL_INCLUDE_DIR}/Plugins")
set(Slicer3_INSTALL_PLUGINS_SHARE_DIR "${Slicer3_INSTALL_SHARE_DIR}/Plugins")
set(Slicer3_INSTALL_PLUGINS_CACHE_DIR "${Slicer3_INSTALL_LIB_DIR}/PluginsCache")

set(Slicer3_INSTALL_MODULES_BIN_DIR "${Slicer3_INSTALL_LIB_DIR}/Modules")
set(Slicer3_INSTALL_MODULES_LIB_DIR "${Slicer3_INSTALL_LIB_DIR}/Modules")
set(Slicer3_INSTALL_MODULES_INCLUDE_DIR "${Slicer3_INSTALL_INCLUDE_DIR}/Modules")
set(Slicer3_INSTALL_MODULES_SHARE_DIR "${Slicer3_INSTALL_SHARE_DIR}/Modules")

set(Slicer3_HOME "${Slicer3_BINARY_DIR}")

32
33
34
35
#-----------------------------------------------------------------------------
# Convenient macro allowing to download a file
#
MACRO(downloadFile url dest)
36
37
38
39
40
41
42
  IF(NOT EXISTS ${dest})
    FILE(DOWNLOAD ${url} ${dest} STATUS status)
    LIST(GET status 0 error_code)
    LIST(GET status 1 error_msg)
    IF(error_code)
      MESSAGE(FATAL_ERROR "error: Failed to download ${url} - ${error_msg}")
    ENDIF()
43
44
  ELSE()
    # Make sure the file is not empty
45
46
47
    FILE(READ ${dest} dest_content LIMIT 4)
    STRING(LENGTH "${dest_content}" dest_length)
    IF(NOT "${dest_length}" EQUAL 4)
48
49
50
      FILE(REMOVE ${dest})
      downloadFile(${url} ${dest})
    ENDIF()
51
52
53
  ENDIF()
ENDMACRO()

54
#-----------------------------------------------------------------------------
55
56
# Disable the warnings that DevStudio 2005 emits wrt to sprintf, strcpu, etc.
#
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
# On Visual Studio 8 MS deprecated C. This removes all 1.276E1265 security
# warnings (copied from ITK's CMake files so that ITK templated code will compile
# correctly).
IF(WIN32)
  IF(NOT BORLAND)
    IF(NOT CYGWIN)
      IF(NOT MINGW)
        ADD_DEFINITIONS(
          -D_CRT_FAR_MAPPINGS_NO_DEPRECATE
          -D_CRT_IS_WCTYPE_NO_DEPRECATE
          -D_CRT_MANAGED_FP_NO_DEPRECATE
          -D_CRT_NONSTDC_NO_DEPRECATE
          -D_CRT_SECURE_NO_DEPRECATE
          -D_CRT_SECURE_NO_DEPRECATE_GLOBALS
          -D_CRT_SETERRORMODE_BEEP_SLEEP_NO_DEPRECATE
          -D_CRT_TIME_FUNCTIONS_NO_DEPRECATE
          -D_CRT_VCCLRIT_NO_DEPRECATE
          -D_SCL_SECURE_NO_DEPRECATE
          )
      ENDIF(NOT MINGW)
    ENDIF(NOT CYGWIN)
  ENDIF(NOT BORLAND)
ENDIF(WIN32)

81
82
83
84
85
# Disable warning C4996: [...] This function or variable may be unsafe. [...]
# To disable deprecation, use _CRT_SECURE_NO_WARNINGS. See online help for details
if(MSVC90)
  add_definitions(-D_CRT_SECURE_NO_WARNINGS)
endif(MSVC90)
86

87
# include a test for endianness (used to be done by default)
barre's avatar
barre committed
88

89
90
91
92
include(${CMAKE_ROOT}/Modules/TestBigEndian.cmake)
test_big_endian(CMAKE_WORDS_BIGENDIAN)

#-----------------------------------------------------------------------------
93
94
95
96
# avoid linker bug in Mac OS 10.5
# see:
# http://wiki.finkproject.org/index.php/Fink:Packaging:Preparing_for_10.5#OpenGL_Bug
#
97
98
99
100
if(APPLE)
  set(CMAKE_SHARED_LINKER_FLAGS "-Wl,-dylib_file,/System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGL.dylib:/System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGL.dylib")
  set(CMAKE_EXE_LINKER_FLAGS "-Wl,-dylib_file,/System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGL.dylib:/System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGL.dylib")
endif(APPLE)
101

102
103
#-----------------------------------------------------------------------------
# Slicer version number.
104
#
105
set(Slicer3_VERSION_MAJOR "3")
106
set(Slicer3_VERSION_MINOR "7")
107
108
109
110
111
if(NOT Slicer3_VERSION_PATCH)
  set(Slicer3_VERSION_PATCH "0")
endif(NOT Slicer3_VERSION_PATCH)
set(Slicer3_VERSION "${Slicer3_VERSION_MAJOR}.${Slicer3_VERSION_MINOR}")
set(Slicer3_VERSION_FULL "${Slicer3_VERSION}.${Slicer3_VERSION_PATCH}")
112

113
114
#-----------------------------------------------------------------------------
# Build shared lib by default
115
#
116
117
option(BUILD_SHARED_LIBS "Build Slicer3 with shared libraries." ON)

118
119
120
121
122
123
124
125
126
127
128
#-----------------------------------------------------------------------------
# Append the library version information to the library target properties.
#
OPTION(Slicer3_WITH_LIBRARY_VERSION "Build with library version information" OFF)
IF(Slicer3_WITH_LIBRARY_VERSION)
  SET(Slicer3_LIBRARY_PROPERTIES ${Slicer3_LIBRARY_PROPERTIES}
    VERSION ${Slicer3_VERSION_FULL}
    SOVERSION ${Slicer3_VERSION}
  )
ENDIF(Slicer3_WITH_LIBRARY_VERSION)

129
130
#-----------------------------------------------------------------------------
# Slicer3 macros
pieper's avatar
pieper committed
131
#
132
133
134
135
set(Slicer3_CMAKE_DIR "${Slicer3_SOURCE_DIR}/CMake" CACHE INTERNAL "")
add_subdirectory(CMake)
# Make sure VTK_CMAKE_DIR is at the beginning so that VTK's FindTCL is
# used before CMake's FindTCL.
136
137
138
139
140
141
set(CMAKE_MODULE_PATH
  "${VTK_CMAKE_DIR}"
  "${Slicer3_CMAKE_DIR}"
  ${Slicer3_BINARY_DIR}/CMake
  ${CMAKE_MODULE_PATH}
  )
pieper's avatar
pieper committed
142

143
include("${Slicer3_CMAKE_DIR}/Slicer3PersistenceMacros.cmake")
hliu's avatar
hliu committed
144

145
146
147
# See http://www.cmake.org/Wiki/CMakeMacroParseArguments
include("${Slicer3_CMAKE_DIR}/Slicer3ParseArgumentsMacro.cmake")

148
149
150
## QT
INCLUDE(${Slicer3_CMAKE_DIR}/Slicer3FindQT.cmake)

151
152
#-----------------------------------------------------------------------------
# Top level slicer3 configurations
153
#
154
155
156
157
158
# If CMake >= 2.6.0
SET(CMAKE_RUNTIME_OUTPUT_DIRECTORY "${CMAKE_BINARY_DIR}/bin")
SET(CMAKE_LIBRARY_OUTPUT_DIRECTORY "${CMAKE_BINARY_DIR}/bin")
SET(CMAKE_ARCHIVE_OUTPUT_DIRECTORY "${CMAKE_BINARY_DIR}/lib")

159
160
161

# Do NOT force into the cache, as plugins need to override locally and scoping
# becomes an issue.
162
#set(CMAKE_LIBRARY_OUTPUT_DIRECTORY ${CMAKE_BINARY_DIR}/bin/ 
163
#  CACHE PATH "Single output directory for building all libraries." FORCE)
164
#set(CMAKE_RUNTIME_OUTPUT_DIRECTORY ${CMAKE_BINARY_DIR}/bin/ 
165
166
167
168
#  CACHE PATH "Single output directory for building all executables." FORCE)

#-----------------------------------------------------------------------------
# Slicer include and libraries subdirectory
169
#
170
171
172
slicer3_set_persistent_property(Slicer3_Libs_LIBRARIES "")
slicer3_set_persistent_property(Slicer3_Base_LIBRARIES "")
slicer3_set_persistent_property(Slicer3_Modules_LIBRARIES "")
173
slicer3_set_persistent_property(Slicer3_QTModules_LIBRARIES "")
174

175
176
177
slicer3_set_persistent_property(Slicer3_Libs_INCLUDE_DIRS "")
slicer3_set_persistent_property(Slicer3_Base_INCLUDE_DIRS "")
slicer3_set_persistent_property(Slicer3_Modules_INCLUDE_DIRS "")
178
slicer3_set_persistent_property(Slicer3_QTModules_INCLUDE_DIRS "")
pieper's avatar
pieper committed
179

180
181
182
183
184
185
186
#-----------------------------------------------------------------------------
# Get sytem name and architecture
#
SET(Slicer3_BUILD NA)
INCLUDE(${Slicer3_CMAKE_DIR}/DiscoverSystemNameAndBits.cmake)
MESSAGE(STATUS "Slicer3_BUILD:${Slicer3_BUILD}")

187
#-----------------------------------------------------------------------------
pieper's avatar
pieper committed
188
# Add the testing directories
189
#
190
191
192
193
OPTION(BUILD_TESTING "Test the project" ON)
SET(Slicer3_BUILD_TESTING ${BUILD_TESTING})
SET(LAUNCH_EXE ${Slicer3_BINARY_DIR}/Slicer3 --launch)
IF(Slicer3_BUILD_TESTING)
194
195
196
197
198
  #IF (NOT BUILDNAME)
  #  SET(BUILDNAME "${Slicer3_BUILD}" CACHE STRING "Name of build on the dashboard")
  #ELSE()
  #  SET(BUILDNAME "${BUILDNAME}" CACHE STRING "Name of build on the dashboard")
  #ENDIF()
199
200
201
202
  ENABLE_TESTING()
  INCLUDE(CTest)
  SET(CXX_TEST_PATH ${CMAKE_RUNTIME_OUTPUT_DIRECTORY})
  MARK_AS_ADVANCED(TCL_TCLSH DART_ROOT)
203
204
205
206
207
208

#-----------------------------------------------------------------------------
# Run test through valgrind: particularly useful for testing modules.
#
option(USE_VALGRIND "Run tests through valgrind." OFF)

209
ENDIF(Slicer3_BUILD_TESTING)
hliu's avatar
hliu committed
210

211
212
213
214
215
216
217
218
#-----------------------------------------------------------------------------
# By default, build with KWWidget
#
option(Slicer3_USE_KWWIDGETS "Build Slicer3 with KWWidgets." ON)

#-----------------------------------------------------------------------------
# Since modules are KWWidgets based, unset there variables
IF (NOT Slicer3_USE_KWWIDGETS)
219
220
221
222
  # Since the module Logic is shared between QTModules and regular Modules,
  # the associated BIN and LIB directory shouldn't be unset
  #UNSET(Slicer3_INSTALL_MODULES_BIN_DIR)
  #UNSET(Slicer3_INSTALL_MODULES_LIB_DIR)
223
224
225
226
  UNSET(Slicer3_INSTALL_MODULES_INCLUDE_DIR)
  UNSET(Slicer3_INSTALL_MODULES_SHARE_DIR)
ENDIF (NOT Slicer3_USE_KWWIDGETS)

227
#-----------------------------------------------------------------------------
228
229
230
231
232
# Libs
# - ITK
# - KWWidgets (pulls in VTK)
#

233
234
235
236
# Relax some constraints related to the build settings file. This was
# preventing people from using the same compiler but with a different generator,
# or just the same compiler installed in a non-standard location.

237
238
239
IF (Slicer3_USE_KWWIDGETS)
  set(SKIP_KWWidgets_BUILD_SETTINGS_FILE 1)
ENDIF(Slicer3_USE_KWWIDGETS)
240
241
set(SKIP_VTK_BUILD_SETTINGS_FILE 1)
set(SKIP_ITK_BUILD_SETTINGS_FILE 1)
242
set(SKIP_Teem_BUILD_SETTINGS_FILE 1)
243
244

#-----------------------------------------------------------------------------
245
## Python
246
247
option(Slicer3_USE_PYTHON "Integrate a python interpreter into Slicer." OFF)
if(Slicer3_USE_PYTHON)
248
  find_package(PythonLibs)
249
endif(Slicer3_USE_PYTHON)
250

251
#-----------------------------------------------------------------------------
252
## ITK
253
254
255
256
257
find_package(ITK REQUIRED)
if(NOT ITK_FOUND)
  message(FATAL_ERROR "Need ITK to build")
endif(NOT ITK_FOUND)
include(${ITK_USE_FILE})
258

259
260
261
#-----------------------------------------------------------------------------
# FindCTK
#
262
SET(git_repo http://github.com/commontk/CTK/raw/master/)
263
264
265
266
267
268
269
270
271
272
273

if (Slicer3_USE_QT)
  SET(file Utilities/CMake/FindCTK.cmake)
  downloadFile(${git_repo}/${file} ${Slicer3_BINARY_DIR}/CMake/FindCTK.cmake)

  FIND_PACKAGE(CTK REQUIRED)
  IF(CTK_FOUND)
    INCLUDE(${CTK_USE_FILE})
  ENDIF()
ENDIF()

274
275
276
277
278
279
280
281
#-----------------------------------------------------------------------------
IF (Slicer3_USE_KWWIDGETS)
  ## KWWidgets
  FIND_PACKAGE(KWWidgets REQUIRED)
  IF(NOT KWWidgets_FOUND)
    MESSAGE(FATAL_ERROR "Need KWWidgets to build")
  ENDIF(NOT KWWidgets_FOUND)
  INCLUDE(${KWWidgets_USE_FILE})
282
  
283
ELSE(Slicer3_USE_KWWIDGETS)
284
285

  # VTK
286
287
  FIND_PACKAGE(VTK REQUIRED)
  IF(NOT VTK_FOUND)
288
    MESSAGE(FATAL_ERROR "Need VTK to build")
289
290
291
292
293
294
  ELSE(NOT VTK_FOUND)
    IF(NOT VTK_USE_QVTK)
      MESSAGE("Please make sure VTK is build with VTK_USE_GUISUPPORT and VTK_USE_QVTK enabled")
    ENDIF(NOT VTK_USE_QVTK)
  ENDIF(NOT VTK_FOUND)
  INCLUDE(${VTK_USE_FILE})
295
  
296
297
ENDIF (Slicer3_USE_KWWIDGETS)

298
299
300
#-----------------------------------------------------------------------------
# Slicer3 is built with cvs head
#
301
302
option(Slicer3_USE_VTK_CVSHEAD "Slicer3 is configurated with cvs head." OFF)
mark_as_advanced(Slicer3_USE_VTK_CVSHEAD)
303

304
#-----------------------------------------------------------------------------
305
306
307
308
309
#
# Call macro defined in ${PROJECT_SOURCE_DIR}/CMake/Slicer3FindQT.cmake
#
SLICER3_SETUP_QT()

310
311
312
313
314
315
316
317
#-----------------------------------------------------------------------------
# Alert the user if both Slicer3_USE_QT and Slicer3_USE_KWWIDGETS are OFF
IF(NOT Slicer3_USE_QT AND NOT Slicer3_USE_KWWIDGETS)
  MESSAGE(FATAL_ERROR "Both Slicer3_USE_QT and Slicer3_USE_KWWIDGETS are OFF. Please, choose one")
ENDIF(NOT Slicer3_USE_QT AND NOT Slicer3_USE_KWWIDGETS)

#-----------------------------------------------------------------------------
# If Slicer3_USE_QT is ON and Slicer3_USE_KWWIDGETS is OFF, complain if VTK_WRAP_TCL is ON
318
# Note: Later on we will expect VTK_WRAP_PYTHON to be ON
319
320
321
322
323
324
IF(Slicer3_USE_QT AND NOT Slicer3_USE_KWWIDGETS)
  IF(VTK_WRAP_TCL)
    MESSAGE(FATAL_ERROR "For now, if Slicer3_USE_QT is ON and Slicer3_USE_KWWIDGETS is OFF, we expect VTK_WRAP_TCL to be OFF")
  ENDIF(VTK_WRAP_TCL)
ENDIF(Slicer3_USE_QT AND NOT Slicer3_USE_KWWIDGETS)

325
326
327
328
329
330
331
332
#-----------------------------------------------------------------------------
# Add Slicer3_USE_PYTHONQT option if Slicer3_USE_QT is ON
IF(Slicer3_USE_QT)
  option(Slicer3_USE_PYTHONQT "Integrate a python-QT interpreter into Slicer." OFF)
  IF(Slicer3_USE_PYTHONQT)
    IF(NOT VTK_WRAP_PYTHON)
      MESSAGE(FATAL_ERROR "Since both Slicer3_USE_QT and Slicer3_USE_PYTHONQT are ON, VTK_WRAP_PYTHON is expected to be ON. Disable Slicer3_USE_PYTHONQT or re-configure VTK with python wrapping.")
    ENDIF(NOT VTK_WRAP_PYTHON)
333
334
    # Enable qMRMLWidgets python wrapping
    SET(qMRMLWidgets_WRAP_PYTHON ON)
335
336
337
  ENDIF(Slicer3_USE_PYTHONQT)
ENDIF(Slicer3_USE_QT)  

338
#-----------------------------------------------------------------------------
339
## Teem
340
341
342
343
344
find_package(Teem REQUIRED)
if(NOT Teem_FOUND)
  message(FATAL_ERROR "Need Teem to build")
endif(NOT Teem_FOUND)
include(${Teem_USE_FILE})
345

346
#-----------------------------------------------------------------------------
347
348
349
350
351
## SlicerLibCurl
find_package(SLICERLIBCURL REQUIRED)
if(SLICERLIBCURL_FOUND)
  include(${SLICERLIBCURL_USE_FILE})
endif(SLICERLIBCURL_FOUND)
352
353

#-----------------------------------------------------------------------------
354
355
356
## BatchMake
option(Slicer3_USE_BatchMake "Build Slicer3 with BatchMake support." OFF)
if(Slicer3_USE_BatchMake)
357
358
  find_package(BatchMake REQUIRED)
  include(${BatchMake_USE_FILE})
359
endif(Slicer3_USE_BatchMake)
360

361
#-----------------------------------------------------------------------------
362
363
## MIDAS
option(Slicer3_USE_MIDAS "Build Slicer3 with MIDAS support." OFF)
364

365
#-----------------------------------------------------------------------------
366
367
368
369
370
371
## OpenIGTLink (Built in Slicer3-lib)
option(Slicer3_USE_OPENIGTLINK "Build Slicer3 with OpenIGTLink support." OFF)
if(Slicer3_USE_OPENIGTLINK)
  find_package(OpenIGTLink REQUIRED)
  include(${OpenIGTLink_USE_FILE})
endif(Slicer3_USE_OPENIGTLINK)
hliu's avatar
hliu committed
372

373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
#-----------------------------------------------------------------------------
## OpenCV (Built in Slicer3-lib)
option(Slicer3_USE_OPENCV "Build Slicer3 with OpenCV support." OFF)
if(Slicer3_USE_OPENCV)
  find_package(OpenCV REQUIRED)

  IF(OPENCV_BUILD_SETTINGS_FILE AND NOT SKIP_OPENCV_BUILD_SETTINGS_FILE)
    INCLUDE(${CMAKE_ROOT}/Modules/CMakeImportBuildSettings.cmake)
    CMAKE_IMPORT_BUILD_SETTINGS(${OPENCV_BUILD_SETTINGS_FILE})
  ENDIF(OPENCV_BUILD_SETTINGS_FILE AND NOT SKIP_OPENCV_BUILD_SETTINGS_FILE)
  
  # Add compiler flags needed to use OPENCV.
  SET(CMAKE_C_FLAGS "${CMAKE_C_FLAGS} ${OPENCV_REQUIRED_C_FLAGS}")
  SET(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} ${OPENCV_REQUIRED_CXX_FLAGS}")
  SET(CMAKE_EXE_LINKER_FLAGS "${CMAKE_EXE_LINKER_FLAGS} ${OPENCV_REQUIRED_LINK_FLAGS}")
  SET(CMAKE_SHARED_LINKER_FLAGS "${CMAKE_SHARED_LINKER_FLAGS} ${OPENCV_REQUIRED_LINK_FLAGS}")
  SET(CMAKE_MODULE_LINKER_FLAGS "${CMAKE_MODULE_LINKER_FLAGS} ${OPENCV_REQUIRED_LINK_FLAGS}")
  
  # Add include directories needed to use OPENCV.
  INCLUDE_DIRECTORIES(BEFORE ${OPENCV_INCLUDE_DIRS})
  
  # Add link directories needed to use OPENCV.
  LINK_DIRECTORIES(${OPENCV_LIBRARY_DIRS})
  #include(${OPENCV_USE_FILE})
endif(Slicer3_USE_OPENCV)


400
401
#-----------------------------------------------------------------------------
# Need some Tcl/Tk info
402
403
404
405
406
407
408
409
410
411
412
413
IF (VTK_WRAP_TCL)
  include("${VTK_CMAKE_DIR}/vtkTclTkMacros.cmake")
  VTK_GET_TCL_TK_VERSION(TCL_TK_MAJOR_VERSION TCL_TK_MINOR_VERSION)
  set(TCL_TK_VERSION_DOT "${TCL_TK_MAJOR_VERSION}.${TCL_TK_MINOR_VERSION}")
  set(TCL_TK_VERSION "${TCL_TK_MAJOR_VERSION}${TCL_TK_MINOR_VERSION}")
  IF(Slicer3_USE_KWWIDGETS)
    include("${KWWidgets_CMAKE_DIR}/KWWidgetsTclTkMacros.cmake")
    incr_tcl_get_version(INCR_TCL_MAJOR_VERSION INCR_TCL_MINOR_VERSION)
    set(INCR_TCL_VERSION_DOT "${INCR_TCL_MAJOR_VERSION}.${INCR_TCL_MINOR_VERSION}")
    set(INCR_TCL_VERSION "${INCR_TCL_MAJOR_VERSION}${INCR_TCL_MINOR_VERSION}")
  ENDIF(Slicer3_USE_KWWIDGETS)
ENDIF (VTK_WRAP_TCL)
414

415
#-----------------------------------------------------------------------------
barre's avatar
barre committed
416
417
418
# Generate the default setup paths scripts.
# Generate some useful scripts that can be used to setup various environment 
# variables and launch the executable properly against external packages.
419
#
420
421
422
423
424
IF (Slicer3_USE_KWWIDGETS)
  include("${KWWidgets_CMAKE_DIR}/KWWidgetsPathsMacros.cmake")
  set(extra_dirs
    "${Teem_DIR}/bin"
    "${BatchMake_DIR}/bin"
425
    "${OpenIGTLink_DIR}/bin"
426
427
428
429
430
431
432
433
    "${Slicer3_HOME}/${Slicer3_INSTALL_PLUGINS_BIN_DIR}"
    "${Slicer3_HOME}/${Slicer3_INSTALL_PLUGINS_LIB_DIR}"
    "${Slicer3_HOME}/${Slicer3_INSTALL_MODULES_BIN_DIR}"
    "${Slicer3_HOME}/${Slicer3_INSTALL_MODULES_LIB_DIR}"
    )
  kwwidgets_generate_setup_paths_scripts(
    "${CMAKE_RUNTIME_OUTPUT_DIRECTORY}" "Slicer3SetupPaths"
    "${extra_dirs}"
434
  )
435
ENDIF (Slicer3_USE_KWWIDGETS)
barre's avatar
barre committed
436

437
#-----------------------------------------------------------------------------
barre's avatar
barre committed
438
439
440
441
442
# VTK 5.0 does not have VTK_CMAKE_DIR
# Alternatively you could use KWWidget's wrapping, which encapsulate
# the differences between various VTK versions:
#  INCLUDE("${KWWidgets_CMAKE_DIR}/KWWidgetsWrappingMacros.cmake")
#  KWWidgets_WRAP_TCL(${LIB_NAME} LIB_TCL_SRCS "${LIB_SRCS}" "")
443
#
444
445
446
447
448
449
IF (Slicer3_USE_KWWIDGETS)
  if(NOT VTK_CMAKE_DIR)
    set(VTK_CMAKE_DIR "${VTK_SOURCE_DIR}/CMake")
  endif(NOT VTK_CMAKE_DIR)
  include("${VTK_CMAKE_DIR}/vtkWrapTcl.cmake")
ENDIF (Slicer3_USE_KWWIDGETS)
450

451
452
#-----------------------------------------------------------------------------
# Check versions of VTK to track CVS HEAD
453
#
454
455
456
457
458
459
460
461
462
463
464
465
466
467
IF (Slicer3_USE_KWWIDGETS)
  find_package(VTK REQUIRED)
  if(EXISTS ${VTK_CMAKE_DIR}/VTKVersionMacros.cmake)
    include(${VTK_CMAKE_DIR}/VTKVersionMacros.cmake)
  else(EXISTS ${VTK_CMAKE_DIR}/VTKVersionMacros.cmake)
    #MESSAGE("Using local version of VTKVersionMacros for compatibility.")
    include(${Slicer3_SOURCE_DIR}/Scripts/VTKVersionMacros.cmake)
  endif(EXISTS ${VTK_CMAKE_DIR}/VTKVersionMacros.cmake)

  vtk_get_source_revision_and_date(VTKsource_revision VTKsource_date)
  if(VTKsource_revision LESS 1.2196)
    message(FATAL_ERROR "Sorry, your VTK library was last updated on ${VTKsource_date}. Its source revision, according to vtkKWWidgetsVersion.h, is ${VTKsource_revision}. Please update to a newer revision.")
  endif(VTKsource_revision LESS 1.2196)
ENDIF (Slicer3_USE_KWWIDGETS)
468

469
470
#-----------------------------------------------------------------------------
# These packages may exist within the Slicer3 source tree
lorensen's avatar
lorensen committed
471
#
472
473
474
set(TCLAP_DIR ${Slicer3_BINARY_DIR}/Libs/SlicerExecutionModel/tclap)
set(ModuleDescriptionParser_DIR ${Slicer3_BINARY_DIR}/Libs/SlicerExecutionModel/ModuleDescriptionParser)
set(GenerateCLP_DIR ${Slicer3_BINARY_DIR}/Libs/SlicerExecutionModel/GenerateCLP)
475
476
477
set(GenerateLM_DIR ${Slicer3_BINARY_DIR}/Libs/GenerateLM)
set(LoadableModule_DIR ${Slicer3_BINARY_DIR}/Libs/LoadableModule)
set(vtkITK_DIR ${Slicer3_BINARY_DIR}/Libs/vtkITK)
478

jcfr's avatar
jcfr committed
479
480
481
482
483
484
485
486
487
488
489
490
491
492
#-----------------------------------------------------------------------------
# Qt Loadable Modules
#
IF(Slicer3_USE_QT)
  OPTION(Slicer3_BUILD_QTLOADABLEMODULES "Build Slicer3 QT Loadable Modules" ON)
  IF(Slicer3_BUILD_QTLOADABLEMODULES)
    ADD_DEFINITIONS(-DSlicer3_BUILD_QTLOADABLEMODULES)
    set(Slicer3_INSTALL_QTLOADABLEMODULES_BIN_DIR "${Slicer3_INSTALL_LIB_DIR}/QTLoadableModules")
    set(Slicer3_INSTALL_QTLOADABLEMODULES_LIB_DIR "${Slicer3_INSTALL_LIB_DIR}/QTLoadableModules")
    set(Slicer3_INSTALL_QTLOADABLEMODULES_INCLUDE_DIR "${Slicer3_INSTALL_INCLUDE_DIR}/QTLoadableModules")
    set(Slicer3_INSTALL_QTLOADABLEMODULES_SHARE_DIR "${Slicer3_INSTALL_SHARE_DIR}/QTLoadableModules")
  ENDIF(Slicer3_BUILD_QTLOADABLEMODULES)
ENDIF(Slicer3_USE_QT)

493
494
495
# --------------------------------------------------------------------------
# Configure and install headers

496
CONFIGURE_FILE(
497
498
499
500
  ${CMAKE_CURRENT_SOURCE_DIR}/vtkSlicerConfigure.h.in 
  ${CMAKE_CURRENT_BINARY_DIR}/vtkSlicerConfigure.h
  )

501
502
503
504
505
506
CONFIGURE_FILE(
  ${CMAKE_CURRENT_SOURCE_DIR}/vtkSlicerVersionConfigure.h.in 
  ${CMAKE_CURRENT_BINARY_DIR}/vtkSlicerVersionConfigure.h
  )

CONFIGURE_FILE(
507
508
  ${CMAKE_CURRENT_SOURCE_DIR}/Scripts/runValgrind.sh.in 
  ${CMAKE_CURRENT_BINARY_DIR}/Scripts/runValgrind.sh
509
510
  )

511
512
513
514
515
CONFIGURE_FILE(
  ${CMAKE_CURRENT_SOURCE_DIR}/Scripts/runValgrindForOneModule.sh.in 
  ${CMAKE_CURRENT_BINARY_DIR}/Scripts/runValgrindForOneModule.sh
  )

516
CONFIGURE_FILE(
517
518
519
520
  ${CMAKE_CURRENT_SOURCE_DIR}/Scripts/computeCodeCoverageLocally.sh.in 
  ${CMAKE_CURRENT_BINARY_DIR}/Scripts/computeCodeCoverageLocally.sh
  )

521
522
523
524
525
CONFIGURE_FILE(
  ${CMAKE_CURRENT_SOURCE_DIR}/Scripts/computeCodeCoverageForOneTest.sh.in 
  ${CMAKE_CURRENT_BINARY_DIR}/Scripts/computeCodeCoverageForOneTest.sh
  )

526
CONFIGURE_FILE(
527
528
529
  ${CMAKE_CURRENT_SOURCE_DIR}/Scripts/runExperimentalOffScreen.sh.in 
  ${CMAKE_CURRENT_BINARY_DIR}/Scripts/runExperimentalOffScreen.sh
  )
530

531
532
533
534
535
536
INCLUDE_DIRECTORIES(
  "${CMAKE_CURRENT_SOURCE_DIR}"
  "${CMAKE_CURRENT_BINARY_DIR}"
  )

INSTALL(FILES 
537
538
539
540
  "${CMAKE_CURRENT_BINARY_DIR}/vtkSlicerConfigure.h"
  DESTINATION ${Slicer3_INSTALL_INCLUDE_DIR} COMPONENT Development
  )

541
542
543
544
545
INSTALL(FILES 
  "${CMAKE_CURRENT_BINARY_DIR}/vtkSlicerVersionConfigure.h"
  DESTINATION ${Slicer3_INSTALL_INCLUDE_DIR} COMPONENT Development
  )

546
547
548
549
550
551
552
553
#-----------------------------------------------------------------------------
# Generate Slicer3Version.txt

INCLUDE(${Slicer3_CMAKE_DIR}/Slicer3TodayMacro.cmake)

# Get build time
TODAY(Slicer3_BUILDDATE)

554
# Note that Slicer_BUILD is set above
555
556
557
558
559
560
561
562
563
564
565
566
567
568
569
570
571
572
573
574
575
576
577
578
579
580
581
582
583
584
585
586

SET(Slicer3_WC_URL NA)
SET(Slicer3_WC_REVISION 0)

# Get SVN info
FIND_PACKAGE(Subversion)
IF(NOT Subversion_FOUND)
  MESSAGE(FATAL_ERROR "error: Install SVN and try to re-configure")
ENDIF(NOT Subversion_FOUND)

# Case where Slicer is checkout using SVN
IF (EXISTS ${CMAKE_CURRENT_SOURCE_DIR}/.svn)
  Subversion_WC_INFO(${CMAKE_CURRENT_SOURCE_DIR} Slicer3)
  CONFIGURE_FILE(
    ${CMAKE_CURRENT_SOURCE_DIR}/Slicer3Version.txt.in 
    ${Slicer3_HOME}/lib/Slicer3/Slicer3Version.txt
    )
ENDIF()

# Case where Slicer is checkout using Git-SVN
IF (EXISTS ${CMAKE_CURRENT_SOURCE_DIR}/.git)
  FIND_PACKAGE(Git)
  IF(NOT Git_FOUND)
    MESSAGE(FATAL_ERROR "error: Failed to locate Git")
  ENDIF(NOT Git_FOUND)
  Git_WC_INFO(${CMAKE_CURRENT_SOURCE_DIR} Slicer3)
  CONFIGURE_FILE(
    ${CMAKE_CURRENT_SOURCE_DIR}/Slicer3Version.txt.in
    ${Slicer3_HOME}/lib/Slicer3/Slicer3Version.txt
    )
ENDIF()

587

588
#-----------------------------------------------------------------------------
pieper's avatar
pieper committed
589
590
# Subdirectories
#
591
592
add_subdirectory(Libs)
add_subdirectory(Base)
593
add_subdirectory(Resources)
594

595
#-----------------------------------------------------------------------------
596
# At this point, let's not have the applications and modules guess which
597
598
# include paths or libraries they need, but use Slicer3_*_LIBRARIES and
# Slicer3_*_INCLUDE_DIRS instead. As far as modules are concerned, both
599
600
601
602
603
# variables are actually set automatically by the import script when building
# against a Slicer3 build or installed tree. When in-source, we need to
# set both variables now. Retrieve them from the persistent property cache
# since they were collected in each subdir (which makes it impossible to
# use normal variables, since a new scope is created in each subdir).
604
605
606
#
slicer3_get_persistent_property(Slicer3_Libs_LIBRARIES Slicer3_Libs_LIBRARIES)
slicer3_get_persistent_property(Slicer3_Base_LIBRARIES Slicer3_Base_LIBRARIES)
607

608
609
slicer3_get_persistent_property(Slicer3_Libs_INCLUDE_DIRS Slicer3_Libs_INCLUDE_DIRS)
slicer3_get_persistent_property(Slicer3_Base_INCLUDE_DIRS Slicer3_Base_INCLUDE_DIRS)
pieper's avatar
pieper committed
610

611
612
613
614
615
#-----------------------------------------------------------------------------
# Module Logic

INCLUDE("${Slicer3_CMAKE_DIR}/Slicer3ModuleLogicMacros.cmake")

616
IF (NOT Slicer3_USE_KWWIDGETS)
617
618
619
  # KWWidgets and Qt modules share the same logics typically located in the
  # kwwdigets modules. When KWWidgets is not build, the logic are missing for Qt
  # we need to manually add them:
620
621
622
623
624
625
  # Loop through Modules subdirectory and try to include Logic subdirectory if it exists
  FILE(GLOB modules_subdirs RELATIVE ${CMAKE_CURRENT_SOURCE_DIR} Modules/*)
  FOREACH(subdir ${modules_subdirs})
    IF(IS_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR}/${subdir}/Logic)
      ADD_SUBDIRECTORY(${subdir}/Logic)
    ENDIF()
626
    FILE(GLOB subsubdirs RELATIVE ${CMAKE_CURRENT_SOURCE_DIR} ${subdir}/*)
627
    FOREACH(subsubdir ${subsubdirs})
628
629
      IF(IS_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR}/${subsubdir}/Logic)
        ADD_SUBDIRECTORY(${subsubdir}/Logic)
630
631
      ENDIF()
    ENDFOREACH()
632
633
  ENDFOREACH()
ENDIF()
634
635


636
637
638
639
#-----------------------------------------------------------------------------
# Modules and CLI
#
option(Slicer3_BUILD_CLI "Build Slicer3 CLI Plugins" ON)
640
641
642
IF (Slicer3_USE_KWWIDGETS)
  option(Slicer3_BUILD_MODULES "Build Slicer3 Modules" ON)
ENDIF (Slicer3_USE_KWWIDGETS)
643

barre's avatar
barre committed
644
include("${Slicer3_CMAKE_DIR}/Slicer3PluginsMacros.cmake")
pieper's avatar
pieper committed
645

646
647
648
649
650
651
652
653
654
655
656
657
658
IF (Slicer3_USE_KWWIDGETS)
  include("${Slicer3_CMAKE_DIR}/Slicer3ModulesMacros.cmake")
  
  if(Slicer3_BUILD_MODULES)
    add_subdirectory(Modules)
  else(Slicer3_BUILD_MODULES)
    # if Slicer3_BUILD_CLI is ON, we still need at least the CommandLineModule
    # so that we can have CLI, without all the other modules
    if(Slicer3_BUILD_CLI)
      add_subdirectory(Modules/CommandLineModule)
    endif(Slicer3_BUILD_CLI)
  endif(Slicer3_BUILD_MODULES)
ENDIF (Slicer3_USE_KWWIDGETS)
659
660
661
662
663
664
665
666
667
668
669
670
671

#-----------------------------------------------------------------------------
# Module EMSegment libraries
# The EMSegment{Registration,Graph,Algorithm,MRML} libraries are built from the top-level
# CMakeLists.txt. Doing so allow to build these libraries also if Slicer3_USE_KWWIDGETS is OFF

if(Slicer3_BUILD_MODULES)
  ADD_SUBDIRECTORY(Modules/EMSegment/Algorithm)
  ADD_SUBDIRECTORY(Modules/EMSegment/MRML)
  ADD_SUBDIRECTORY(Modules/EMSegment/Registration)
  ADD_SUBDIRECTORY(Modules/EMSegment/Graph)
endif()

672
673
674
675
676
677
678
679
680
# Since EMSegment module expects Volume module and its associated library to be
# built beforehand,let's enfore that by building EMSegment here.
# Note that EMSegment has been commented in Modules/CMakeLists.txt
IF (Slicer3_USE_KWWIDGETS)
  if(Slicer3_BUILD_MODULES)
    ADD_SUBDIRECTORY(Modules/EMSegment)
  endif()
ENDIF()

681
#-----------------------------------------------------------------------------
jcfr's avatar
jcfr committed
682
# Qt Loadable Modules
683
#
jcfr's avatar
jcfr committed
684
685
686
IF(Slicer3_USE_QT AND Slicer3_BUILD_QTLOADABLEMODULES)
  add_subdirectory(QTModules)
ENDIF(Slicer3_USE_QT AND Slicer3_BUILD_QTLOADABLEMODULES)
687

688
689
690
691
#-----------------------------------------------------------------------------
# Applications need to be built after Modules to capture the TractTracing in
# the correct ordering.
#
692
add_subdirectory(Applications)
693

694
695
696
#-----------------------------------------------------------------------------
# Testing
#
697
698
699
if(Slicer3_BUILD_TESTING)
  add_subdirectory(Testing)
endif(Slicer3_BUILD_TESTING)
pieper's avatar
pieper committed
700

701
# Install testing data
andy's avatar
andy committed
702

703
704
705
706
707
708
709
710
install(DIRECTORY
  Testing
  DESTINATION ${Slicer3_INSTALL_SHARE_DIR} COMPONENT Development
  PATTERN ".svn" EXCLUDE
  PATTERN "CMakeLists.txt" EXCLUDE
  )

#-----------------------------------------------------------------------------
711
# Launcher for slicer
712
#
713

714
715
# let's build the launcher for Kww, KwwAndQt and also QtOnly slicer ...
ADD_SUBDIRECTORY(Utilities/Launcher)
716

717
718
719
720
721
# Compute Slicer3_QT_PLUGIN_PATH used to configure launch.tcl.in
SET(Slicer3_QT_PLUGIN_PATH "")
IF(Slicer3_USE_QT)
  SET(designer_launcher_project_name SlicerQT)
  GET_TARGET_PROPERTY(output_directory ${designer_launcher_project_name} LIBRARY_OUTPUT_DIRECTORY)
722
  SET(Slicer3_QT_PLUGIN_PATH ${output_directory})
723
724
ENDIF(Slicer3_USE_QT)

725
726
727
728
729
730
731
732
CONFIGURE_FILE(
  ${Slicer3_SOURCE_DIR}/launch.tcl.in
  "${Slicer3_BINARY_DIR}/${Slicer3_INSTALL_LIB_DIR}/launch.tcl"
  )
INSTALL(
  FILES "${Slicer3_BINARY_DIR}/${Slicer3_INSTALL_LIB_DIR}/launch.tcl"
  DESTINATION ${Slicer3_INSTALL_LIB_DIR}
  )
733

734
735
736
737
738
739
740
741
#-----------------------------------------------------------------------------
# Launcher for QTDesigner
#

IF (Slicer3_USE_QT)
  add_subdirectory(Utilities/Designer)
ENDIF (Slicer3_USE_QT)

742
#-----------------------------------------------------------------------------
743
# Package slicer
744
#
745
add_subdirectory(Utilities/Package)
andy's avatar
andy committed
746

747
#-----------------------------------------------------------------------------
748
# Documentation
749
#
750
751
752
753
option(BUILD_DOCUMENTATION "Build Slicer3 Documentation" OFF)
if(BUILD_DOCUMENTATION)
  add_subdirectory(Utilities/Doxygen)
endif(BUILD_DOCUMENTATION)
andy's avatar
andy committed
754

755
756
757
758
759
760
761
#-----------------------------------------------------------------------------
# Setup file for setting custom ctest vars
CONFIGURE_FILE(
  ${Slicer3_SOURCE_DIR}/CTestCustom.cmake.in
  ${Slicer3_BINARY_DIR}/CTestCustom.cmake
  @ONLY
  )
762

763

764
#-----------------------------------------------------------------------------
765
766
# Set up for building against a Slicer3 build tree and a Slicer3 installation 
#
767
768
include(${Slicer3_SOURCE_DIR}/GenerateSlicer3Config.cmake)

769
770
771
configure_file(${Slicer3_SOURCE_DIR}/CTestConfig.cmake
  ${Slicer3_BINARY_DIR}/${Slicer3_INSTALL_LIB_DIR}/CTestConfig.cmake COPYONLY IMMEDIATE)

772
773
774
configure_file(${Slicer3_SOURCE_DIR}/UseSlicer3.cmake.in
  ${Slicer3_BINARY_DIR}/UseSlicer3.cmake COPYONLY IMMEDIATE)

775
776
777
778
779
configure_file(${Slicer3_SOURCE_DIR}/CMake/RemoveTemporaryFiles.cmake.in
  ${Slicer3_BINARY_DIR}/CMake/RemoveTemporaryFiles.cmake @ONLY IMMEDIATE)
configure_file(${Slicer3_SOURCE_DIR}/CMake/Slicer3SampleBuildTest.cmake.in
  ${Slicer3_BINARY_DIR}/CMake/Slicer3SampleBuildTest.cmake @ONLY)

780
781
install(FILES
  #   ${Slicer3_BINARY_DIR}/Slicer3BuildSettings.cmake
782
  ${Slicer3_SOURCE_DIR}/CTestConfig.cmake
783
784
  ${Slicer3_BINARY_DIR}/UseSlicer3.cmake
  ${Slicer3_BINARY_DIR}/Utilities/Slicer3Config.cmake
hayes's avatar
hayes committed
785
  ${Slicer3_BINARY_DIR}/lib/Slicer3/Slicer3Version.txt
786
  DESTINATION ${Slicer3_INSTALL_LIB_DIR}
787
788
  COMPONENT Development
  )