<?xml version="1.0" encoding="utf-8"?>
<executable>
  <category>Converters</category>
  <title>Orient Images</title>
  <description>
Orients an output volume. Rearranges the slices in a volume according to the selected orientation. The slices are not interpolated. They are just reordered and/or permuted. The resulting volume will cover the original volume. NOTE: since Slicer3 takes into account the orientation of a volume, the re-oriented volume will not show any difference from the original volume, To see the difference, save the volume and display it with a system that either ignores the orientation of the image (e.g. Paraview) or displays individual images.
</description>
  <version>0.1.0.$Revision$(alpha)</version>
  <documentation-url>http://www.slicer.org/slicerWiki/index.php/Modules:orientImages-Documentation-3.4</documentation-url>
  <license></license>
  <contributor>Bill Lorensen</contributor>
<acknowledgements>
This work is part of the National Alliance for Medical Image Computing (NAMIC), funded by the National Institutes of Health through the NIH Roadmap for Medical Research, Grant U54 EB005149.
</acknowledgements>

  <parameters>
    <label>IO</label>
    <description>Input/output parameters</description>
    <image>
      <name>inputVolume1</name>
      <label>Input Volume 1</label>
      <channel>input</channel>
      <index>0</index>
      <description>Input volume 1</description>
    </image>
    <image>
      <name>outputVolume</name>
      <label>Output Volume</label>
      <channel>output</channel>
      <index>1</index>
      <description>The oriented volume</description>
    </image>
  </parameters>

  <parameters>
    <label>Orientation Parameters</label>
    <description>Orientation of output</description>
    <string-enumeration>
      <name>orientation</name>
      <flag>o</flag>
      <longflag>orientation</longflag>
      <description>Orientation choices</description>
      <default>LPS</default>
      <label>Orientation</label>
        <element>Axial</element>
        <element>Coronal</element>
        <element>Sagittal</element>
        <element>RIP</element>
        <element>LIP</element>
        <element>RSP</element>
        <element>LSP</element>
        <element>RIA</element>
        <element>LIA</element>
        <element>RSA</element>
        <element>LSA</element>
        <element>IRP</element>
        <element>ILP</element>
        <element>SRP</element>
        <element>SLP</element>
        <element>IRA</element>
        <element>ILA</element>
        <element>SRA</element>
        <element>SLA</element>
        <element>RPI</element>
        <element>LPI</element>
        <element>RAI</element>
        <element>LAI</element>
        <element>RPS</element>
        <element>LPS</element>
        <element>RAS</element>
        <element>LAS</element>
        <element>PRI</element>
        <element>PLI</element>
        <element>ARI</element>
        <element>ALI</element>
        <element>PRS</element>
        <element>PLS</element>
        <element>ARS</element>
        <element>ALS</element>
        <element>IPR</element>
        <element>SPR</element>
        <element>IAR</element>
        <element>SAR</element>
        <element>IPL</element>
        <element>SPL</element>
        <element>IAL</element>
        <element>SAL</element>
        <element>PIR</element>
        <element>PSR</element>
        <element>AIR</element>
        <element>ASR</element>
        <element>PIL</element>
        <element>PSL</element>
        <element>AIL</element>
        <element>ASL</element>
    </string-enumeration>
  </parameters>

</executable>
