Third Party Credits {#Credits}
===================

%BioGears was developed using the following software tools:

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## <a href="http://www.cmake.org/">CMake</a>

Usage: Cross-platform build process using compiler-independent methods.

<img src="./images/Credits/CMake.png" alt="CMake" align="left"> <br> <br> <br> <br> <br> <br>

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## <a href="http://www.stack.nl/~dimitri/doxygen/">Code Synthesis</a>

Usage: XML data binding compiler to C++.

<img src="./images/Credits/CodeSynthesis.png" alt="CodeSynthesis" align="left"> <br> <br> <br>

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## <a href="http://eigen.tuxfamily.org/index.php?title=Main_Page">Eigen</a>

Usage: Matrix manipulation and linear algebra solver for the circuit solver, substance transporter, and saturation calcuations.

<img src="./images/Credits/Eigen.jpg" alt="Eigen" align="left"> <br> <br> <br> <br> <br> <br> <br> <br>

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## <a href="http://log4cpp.sourceforge.net/">log4cpp</a>

Usage: Logging.

<img src="./images/Credits/SourceForge.png" alt="SourceForge" align="left"> <br> <br> <br> <br> <br> <br> <br>

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## <a href="http://www.jfree.org/jfreechart/">JFreeChart</a>

Usage: Creating image plots of output data.

<img src="./images/Credits/SourceForge.png" alt="SourceForge" align="left"> <br> <br> <br> <br> <br> <br> <br>

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## <a href="http://jchart2d.sourceforge.net/">JChart2D</a>

Usage: Creating realtime plots of output data.

<img src="./images/Credits/SourceForge.png" alt="SourceForge" align="left"> <br> <br> <br> <br> <br> <br> <br>

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## <a href="http://ant.apache.org/">Apache Ant</a>

Usage: Compiling and running Java applications.

<img src="./images/Credits/Ant.gif" alt="Ant" align="left"> <br> <br> <br> <br> <br>

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## <a href="http://www.stack.nl/~dimitri/doxygen/">Doxygen</a>

Usage: HTML documentation generation.

<img src="./images/Credits/doxygen.png" alt="Doxygen" align="left"> <br> <br> <br> <br>

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## <a href="http://strawberryperl.com/">Strawberry Perl</a>

Usage: Required by Doxygen for citations and creating a references page.

<img src="./images/Credits/Perl.png" alt="Perl" align="left"> <br> <br> <br> <br> <br>

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## <a href="http://miktex.org/">MiKTeX</a>

Usage: Required by Doxygen for citations and creating a references page.

<img src="./images/Credits/MiKTeX.png" alt="MiKTeX" align="left"> <br> <br> <br> <br>

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## <a href="https://code.google.com/p/reflections/">Reflections</a>

Usage: Reflectively analyze classes for dynamic GUI generation.
