... | ... | @@ -7,8 +7,8 @@ Methodology Layout |
|
|
|
|
|
All reports have the same basic layout and information that follows the [Methodology Template] (https://gitlab.kitware.com/physiology/engine/blob/master/docs/Methodology/MethodologyTemplate.md). These documents need to be updated as part of the contribution process.
|
|
|
|
|
|
Adding Images
|
|
|
-------------
|
|
|
Adding Images and Plots
|
|
|
-----------------------
|
|
|
|
|
|
### Static Figures
|
|
|
|
... | ... | @@ -41,9 +41,11 @@ Adding Tables |
|
|
|
|
|
### System or Compartment Tables
|
|
|
|
|
|
With a few exceptions, all system variables (i.e., vitals) should have a healthy standard validation value associated with it. These tables are in the *Validation - Resting Physiologic State* section.
|
|
|
With a few exceptions, all system variables (i.e., vitals) should have a healthy standard validation value associated with it. These tables are in the *Validation - Resting Physiologic State* section of each system methodology document (see the respiratory report example [here] (https://pulse.kitware.com/_respiratory_methodology.html#respiratory-validation)). The tables are automatically generated from verification scenario outputs during the [Generating Documentation] (https://gitlab.kitware.com/physiology/engine/wikis/Generating%20Documentation) process.
|
|
|
|
|
|
TODO how to add values
|
|
|
Values can be added to the validation table by following these steps:
|
|
|
1. Add the new *DataRequest* to the appropriate pba scenario file in the `<pulse/build>/install/bin/verification/scenarios/validation` directory. You will need to [update the baselines] (https://gitlab.kitware.com/physiology/engine/wikis/Updating%20Baselines) as part of the submission process.
|
|
|
2. Add the associated properly cited validation data to a new row in the proper validation Excel spreadsheet located in the [validation directory] (https://gitlab.kitware.com/physiology/engine/tree/master/test/validation).
|
|
|
|
|
|
### Static Tables
|
|
|
|
... | ... | @@ -52,7 +54,7 @@ TODO how to add values |
|
|
|
|
|
Each action and condition should have at least one scenario associated with it and all scenarios should have expected values for important parameters to validate appropriate functionality.
|
|
|
|
|
|
|
|
|
engine\test\validation
|
|
|
|
|
|
|
|
|
Adding Equations
|
... | ... | |