Updates to Renal validation and methodology report.
Additions to Comprehensive scenario.

- Added support for Pulse Scenarios and a start to the Pulse Configuration in Java

# Conflicts:
#	data/human/adult/scenarios/miscellaneous/PulmonaryShunt.json
#	data/human/adult/scenarios/validation/systems/RespiratoryValidation.json
#	data/human/adult/validation/SystemValidationData.xlsx

Generic Mechanical Ventilator

See merge request !45

Updated scenarios with new mechanical ventilator definition.

Optimization of the profiler

Creation API and State Update

See merge request !44

Add higher cmake min requirement

Fix CSV file generation from C#/Python

Scenarios via Java are working
Still need to : Update C# and Python, as well as convert Java engine interface over to their style

Allows systems to override loaded state based on new configuration options

Hemorhagic Shock

See merge request !43

Replace == 0 with IsZero

Tuned pneumothorax a little.