Commit d1d0df4a authored by Aaron Bray's avatar Aaron Bray
Browse files

Hemorrhage scenarios are finalized

parent fa973b35
......@@ -31,8 +31,4 @@ Macro EngineUnitTest=EngineUnitTestDriver FastPlot Baseline=unit_tests/pulse/ Co
Macro EngineUnitTestFull=EngineUnitTestDriver FullPlot Baseline=unit_tests/pulse/ Computed=./test_results/unit_tests/pulse
Macro ScenarioTest=ScenarioTestDriver FastPlot Baseline=scenarios/ Computed=./test_results/scenarios
#patient/HemorrhageClass3PackedRBC.json = ScenarioTest
patient/HemorrhageClass2NoFluid.json = ScenarioTest
patient/HemorrhageClass2NoFluidLongTerm.json = ScenarioTest
#patient/HemorrhageClass4NoFluid.json = ScenarioTest
#patient/HemorrhageClass4NoFluidLongTerm.json = ScenarioTest
patient/BasicStandard.json = ScenarioTest
......@@ -54,11 +54,9 @@ patient/HemorrhageClass2FemoralArtery.json = ScenarioTest
patient/HemorrhageClass2InternalMultiple.json = ScenarioTest
patient/HemorrhageClass2InternalSpleen.json = ScenarioTest
patient/HemorrhageClass2NoFluid.json = ScenarioTest
patient/HemorrhageClass2NoFluidLongTerm.json = ScenarioTest
patient/HemorrhageClass2Saline.json = ScenarioTest
patient/HemorrhageClass3PackedRBC.json = ScenarioTest
patient/HemorrhageClass4NoFluid.json = ScenarioTest
patient/HemorrhageClass4NoFluidLongTerm.json = ScenarioTest
patient/HemorrhageCM1.json = ScenarioTest
patient/HemorrhageCM2.json = ScenarioTest
patient/LobarPneumoniaModerateBothLungs.json = ScenarioTest
......
{
"Name": "HemorrhageCM1",
"Description": "Bleeding in the right leg and vena cava, then iv administration.",
"StartType": {
"Description": "",
"StartType":
{
"PatientConfiguration": {
"PatientFile": "StandardMale.json"
}
},
"DataRequestManager": {
"DataRequest": [{
"DecimalFormat": {
"Precision": 1
},
"PropertyName": "Weight",
"Unit": "kg"
}, {
"DecimalFormat": {
"Precision": 2
},
"Category": "Physiology",
"PropertyName": "HeartRate",
"Unit": "1/min"
}, {
"DecimalFormat": {
"Precision": 1
},
"Category": "Physiology",
"PropertyName": "HeartStrokeVolume",
"Unit": "mL"
}, {
"DecimalFormat": {
"Precision": 2
},
"Category": "Physiology",
"PropertyName": "BloodVolume",
"Unit": "L"
}, {
"DecimalFormat": {
"Precision": 1
},
"Category": "Physiology",
"PropertyName": "ExtravascularFluidVolume",
"Unit": "L"
}, {
"DecimalFormat": {
"Precision": 1
},
"Category": "Physiology",
"PropertyName": "ArterialPressure",
"Unit": "mmHg"
}, {
"DecimalFormat": {
"Precision": 1
},
"Category": "Physiology",
"PropertyName": "MeanArterialPressure",
"Unit": "mmHg"
}, {
"DecimalFormat": {
},
"Category": "Physiology",
"PropertyName": "SystolicArterialPressure",
"Unit": "mmHg"
}, {
"DecimalFormat": {
"Precision": 1
},
"Category": "Physiology",
"PropertyName": "DiastolicArterialPressure",
"Unit": "mmHg"
}, {
"DecimalFormat": {
"Precision": 2
},
"Category": "Physiology",
"PropertyName": "CardiacOutput",
"Unit": "L/min"
}, {
"DecimalFormat": {
},
"Category": "Physiology",
"PropertyName": "HemoglobinContent",
"Unit": "g"
}, {
"DecimalFormat": {
"Precision": 2
},
"Category": "Physiology",
"PropertyName": "CentralVenousPressure",
"Unit": "mmHg"
}, {
"DecimalFormat": {
"Precision": 2
},
"Category": "Physiology",
"PropertyName": "PulmonaryCapillariesWedgePressure",
"Unit": "mmHg"
}, {
"DecimalFormat": {
"Precision": 3
},
"Category": "Physiology",
"PropertyName": "TidalVolume",
"Unit": "mL"
}, {
"DecimalFormat": {
"Precision": 2
},
"Category": "Physiology",
"PropertyName": "TotalLungVolume",
"Unit": "L"
}, {
"DecimalFormat": {
"Precision": 2
},
"Category": "Physiology",
"PropertyName": "RespirationRate",
"Unit": "1/min"
}, {
"DecimalFormat": {
"Precision": 3
},
"Category": "Physiology",
"PropertyName": "OxygenSaturation",
"Unit": "unitless"
}, {
"DecimalFormat": {
"Precision": 3
},
"Category": "Physiology",
"PropertyName": "CarbonDioxideSaturation",
"Unit": "unitless"
}, {
"DecimalFormat": {
"Precision": 4
},
"Category": "Physiology",
"PropertyName": "EndTidalCarbonDioxideFraction",
"Unit": "unitless"
}, {
"DecimalFormat": {
"Precision": 2
},
"Category": "Physiology",
"PropertyName": "TotalAlveolarVentilation",
"Unit": "L/min"
}, {
"DecimalFormat": {
"Precision": 2
},
"Category": "Physiology",
"PropertyName": "TranspulmonaryPressure",
"Unit": "cmH2O"
}, {
"DecimalFormat": {
"Precision": 1
},
"Category": "Physiology",
"PropertyName": "CoreTemperature",
"Unit": "degC"
}, {
"DecimalFormat": {
"Precision": 1
},
"Category": "Physiology",
"PropertyName": "SkinTemperature",
"Unit": "degC"
}, {
"DecimalFormat": {
"Precision": 3
},
"Category": "Physiology",
"PropertyName": "RespiratoryExchangeRatio",
"Unit": "unitless"
}, {
"DecimalFormat": {
},
"Category": "Physiology",
"PropertyName": "OxygenConsumptionRate",
"Unit": "mL/min"
}, {
"DecimalFormat": {
},
"Category": "Physiology",
"PropertyName": "CarbonDioxideProductionRate",
"Unit": "mL/min"
}, {
"DecimalFormat": {
},
"Category": "Physiology",
"PropertyName": "GlomerularFiltrationRate",
"Unit": "mL/min"
}, {
"DecimalFormat": {
"Precision": 2
},
"Category": "Physiology",
"PropertyName": "RenalBloodFlow",
"Unit": "L/min"
}, {
"DecimalFormat": {
"Precision": 3
},
"Category": "Physiology",
"PropertyName": "UrineProductionRate",
"Unit": "mL/min"
}, {
"DecimalFormat": {
"Precision": 4
},
"Category": "Physiology",
"PropertyName": "LeftAfferentArterioleResistance",
"Unit": "mmHg min/mL"
}, {
"DecimalFormat": {
"Precision": 4
},
"Category": "Physiology",
"PropertyName": "RightAfferentArterioleResistance",
"Unit": "mmHg min/mL"
}, {
"DecimalFormat": {
},
"Category": "GasCompartment",
"CompartmentName": "LeftAlveoli",
"PropertyName": "Pressure",
"Unit": "cmH2O"
}, {
"DecimalFormat": {
},
"Category": "GasCompartment",
"CompartmentName": "LeftAlveoli",
"SubstanceName": "Oxygen",
"PropertyName": "PartialPressure",
"Unit": "mmHg"
}, {
"DecimalFormat": {
"Precision": 1
},
"Category": "GasCompartment",
"CompartmentName": "LeftAlveoli",
"SubstanceName": "CarbonDioxide",
"PropertyName": "PartialPressure",
"Unit": "mmHg"
}, {
"DecimalFormat": {
},
"Category": "GasCompartment",
"CompartmentName": "RightAlveoli",
"PropertyName": "Pressure",
"Unit": "cmH2O"
}, {
"DecimalFormat": {
},
"Category": "GasCompartment",
"CompartmentName": "RightAlveoli",
"SubstanceName": "Oxygen",
"PropertyName": "PartialPressure",
"Unit": "mmHg"
}, {
"DecimalFormat": {
"Precision": 1
},
"Category": "GasCompartment",
"CompartmentName": "RightAlveoli",
"SubstanceName": "CarbonDioxide",
"PropertyName": "PartialPressure",
"Unit": "mmHg"
}, {
"DecimalFormat": {
},
"Category": "GasCompartment",
"CompartmentName": "Carina",
"SubstanceName": "Oxygen",
"PropertyName": "PartialPressure",
"Unit": "cmH2O"
}, {
"DecimalFormat": {
"Precision": 1
},
"Category": "GasCompartment",
"CompartmentName": "Carina",
"SubstanceName": "CarbonDioxide",
"PropertyName": "PartialPressure",
"Unit": "cmH2O"
}, {
"DecimalFormat": {
"Precision": 1
},
"Category": "LiquidCompartment",
"CompartmentName": "Aorta",
"SubstanceName": "Oxygen",
"PropertyName": "PartialPressure",
"Unit": "mmHg"
}, {
"DecimalFormat": {
"Precision": 1
},
"Category": "LiquidCompartment",
"CompartmentName": "Aorta",
"SubstanceName": "CarbonDioxide",
"PropertyName": "PartialPressure",
"Unit": "mmHg"
}, {
"DecimalFormat": {
"Precision": 1
},
"Category": "LiquidCompartment",
"CompartmentName": "VenaCava",
"SubstanceName": "Oxygen",
"PropertyName": "PartialPressure",
"Unit": "mmHg"
}, {
"DecimalFormat": {
"Precision": 1
},
"Category": "LiquidCompartment",
"CompartmentName": "VenaCava",
"SubstanceName": "CarbonDioxide",
"PropertyName": "PartialPressure",
"Unit": "mmHg"
}, {
"DecimalFormat": {
"Precision": 2
},
"Category": "LiquidCompartment",
"CompartmentName": "RightTubules",
"SubstanceName": "Sodium",
"PropertyName": "Concentration",
"Unit": "g/L"
}, {
"DecimalFormat": {
"Precision": 2
},
"Category": "LiquidCompartment",
"CompartmentName": "LeftTubules",
"SubstanceName": "Sodium",
"PropertyName": "Concentration",
"Unit": "g/L"
}, {
"DecimalFormat": {
"Precision": 2
},
"Category": "Substance",
"SubstanceName": "Oxygen",
"PropertyName": "AlveolarTransfer",
"Unit": "mL/s"
}, {
"DecimalFormat": {
"Precision": 2
},
"Category": "Substance",
"SubstanceName": "CarbonDioxide",
"PropertyName": "AlveolarTransfer",
"Unit": "mL/s"
}, {
"DecimalFormat": {
"Precision": 6
},
"Category": "Substance",
"SubstanceName": "Epinephrine",
"PropertyName": "BloodConcentration",
"Unit": "ug/L"
}, {
"DecimalFormat": {
"Precision": 3
},
"Category": "Physiology",
"PropertyName": "SystemicVascularResistance",
"Unit": "mmHg s/mL"
}, {
"DecimalFormat": {
"Precision": 1
},
"Category": "Physiology",
"PropertyName": "UrineOsmolality",
"Unit": "mOsm/kg"
}, {
"DecimalFormat": {
"Precision": 3
},
"Category": "Physiology",
"PropertyName": "RightTubularReabsorptionFluidPermeability",
"Unit": "mL/s mmHg m^2"
}, {
"DecimalFormat": {
"Precision": 3
},
"Category": "Physiology",
"PropertyName": "LeftTubularReabsorptionFluidPermeability",
"Unit": "mL/s mmHg m^2"
}, {
"DecimalFormat": {
"Precision": 2
},
"Category": "Substance",
"SubstanceName": "Sodium",
"PropertyName": "BloodConcentration",
"Unit": "g/L"
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"Precision": 5
},
"Category": "Substance",
"SubstanceName": "Sodium",
"PropertyName": "Clearance-RenalClearance",
"Unit": "mL/min kg"
}, {
"DecimalFormat": {
},
"Category": "Substance",
"SubstanceName": "Sodium",
"PropertyName": "Clearance-RenalReabsorptionRate",
"Unit": "mg/min"
}, {
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"Precision": 1
},
"Category": "Substance",
"SubstanceName": "Sodium",
"PropertyName": "MassInBody",
"Unit": "g"
}, {
"DecimalFormat": {
"Precision": 2
},
"Category": "LiquidCompartment",
"CompartmentName": "Bladder",
"SubstanceName": "Sodium",
"PropertyName": "Concentration",
"Unit": "g/L"
}, {
"DecimalFormat": {
"Precision": 2
},
"Category": "LiquidCompartment",
"CompartmentName": "RightUreter",
"PropertyName": "InFlow",
"Unit": "mL/min"
}, {
"DecimalFormat": {
"Precision": 2
},
"Category": "LiquidCompartment",
"CompartmentName": "LeftUreter",
"PropertyName": "InFlow",
"Unit": "mL/min"
}]
"DataRequestManager":
{
"DataRequest":
[
{ "DecimalFormat": { "Precision": 1 }, "PropertyName": "Weight", "Unit": "kg" },
{ "DecimalFormat": { "Precision": 2 }, "Category": "Physiology", "PropertyName": "HeartRate", "Unit": "1/min" },
{ "DecimalFormat": { "Precision": 1 }, "Category": "Physiology", "PropertyName": "HeartStrokeVolume", "Unit": "mL" },
{ "DecimalFormat": { "Precision": 2 }, "Category": "Physiology", "PropertyName": "BloodVolume", "Unit": "L" },
{ "DecimalFormat": { "Precision": 1 }, "Category": "Physiology", "PropertyName": "ExtravascularFluidVolume", "Unit": "L" },
{ "DecimalFormat": { "Precision": 1 }, "Category": "Physiology", "PropertyName": "ArterialPressure", "Unit": "mmHg" },
{ "DecimalFormat": { "Precision": 1 }, "Category": "Physiology", "PropertyName": "MeanArterialPressure", "Unit": "mmHg" },
{ "DecimalFormat": { }, "Category": "Physiology", "PropertyName": "SystolicArterialPressure", "Unit": "mmHg" },
{ "DecimalFormat": { "Precision": 1 }, "Category": "Physiology", "PropertyName": "DiastolicArterialPressure", "Unit": "mmHg" },
{ "DecimalFormat": { "Precision": 2 }, "Category": "Physiology", "PropertyName": "CardiacOutput", "Unit": "L/min" },
{ "DecimalFormat": { }, "Category": "Physiology", "PropertyName": "HemoglobinContent", "Unit": "g" },
{ "DecimalFormat": { "Precision": 2 }, "Category": "Physiology", "PropertyName": "CentralVenousPressure", "Unit": "mmHg" },
{ "DecimalFormat": { "Precision": 2 }, "Category": "Physiology", "PropertyName": "PulmonaryCapillariesWedgePressure", "Unit": "mmHg" },
{ "DecimalFormat": { "Precision": 3 }, "Category": "Physiology", "PropertyName": "TidalVolume", "Unit": "mL" },
{ "DecimalFormat": { "Precision": 2 }, "Category": "Physiology", "PropertyName": "TotalLungVolume", "Unit": "L" },
{ "DecimalFormat": { "Precision": 2 }, "Category": "Physiology", "PropertyName": "RespirationRate", "Unit": "1/min" },
{ "DecimalFormat": { "Precision": 3 }, "Category": "Physiology", "PropertyName": "OxygenSaturation", "Unit": "unitless" },
{ "DecimalFormat": { "Precision": 3 }, "Category": "Physiology", "PropertyName": "CarbonDioxideSaturation", "Unit": "unitless" },
{ "DecimalFormat": { "Precision": 4 }, "Category": "Physiology", "PropertyName": "EndTidalCarbonDioxideFraction", "Unit": "unitless" },
{ "DecimalFormat": { "Precision": 2 }, "Category": "Physiology", "PropertyName": "TotalAlveolarVentilation", "Unit": "L/min" },
{ "DecimalFormat": { "Precision": 2 }, "Category": "Physiology", "PropertyName": "TranspulmonaryPressure", "Unit": "cmH2O" },
{ "DecimalFormat": { "Precision": 1 }, "Category": "Physiology", "PropertyName": "CoreTemperature", "Unit": "degC" },
{ "DecimalFormat": { "Precision": 1 }, "Category": "Physiology", "PropertyName": "SkinTemperature", "Unit": "degC" },
{ "DecimalFormat": { "Precision": 3 }, "Category": "Physiology", "PropertyName": "RespiratoryExchangeRatio", "Unit": "unitless" },
{ "DecimalFormat": { }, "Category": "Physiology", "PropertyName": "OxygenConsumptionRate", "Unit": "mL/min" },
{ "DecimalFormat": { }, "Category": "Physiology", "PropertyName": "CarbonDioxideProductionRate", "Unit": "mL/min" },
{ "DecimalFormat": { }, "Category": "Physiology", "PropertyName": "GlomerularFiltrationRate", "Unit": "mL/min" },
{ "DecimalFormat": { "Precision": 2 }, "Category": "Physiology", "PropertyName": "RenalBloodFlow", "Unit": "L/min" },
{ "DecimalFormat": { "Precision": 3 }, "Category": "Physiology", "PropertyName": "UrineProductionRate", "Unit": "mL/min" },
{ "DecimalFormat": { "Precision": 4 }, "Category": "Physiology", "PropertyName": "LeftAfferentArterioleResistance", "Unit": "mmHg min/mL" },
{ "DecimalFormat": { "Precision": 4 }, "Category": "Physiology", "PropertyName": "RightAfferentArterioleResistance", "Unit": "mmHg min/mL" },
{ "DecimalFormat": { }, "Category": "GasCompartment", "CompartmentName": "LeftAlveoli", "PropertyName": "Pressure", "Unit": "cmH2O" },
{ "DecimalFormat": { }, "Category": "GasCompartment", "CompartmentName": "RightAlveoli", "PropertyName": "Pressure", "Unit": "cmH2O" },
{ "DecimalFormat": { }, "Category": "GasCompartment", "CompartmentName": "LeftAlveoli", "SubstanceName": "Oxygen", "PropertyName": "PartialPressure", "Unit": "mmHg" },
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{ "DecimalFormat": { }, "Category": "GasCompartment", "CompartmentName": "RightAlveoli", "SubstanceName": "Oxygen", "PropertyName": "PartialPressure", "Unit": "mmHg" },
{ "DecimalFormat": { "Precision": 1 }, "Category": "GasCompartment", "CompartmentName": "RightAlveoli", "SubstanceName": "CarbonDioxide", "PropertyName": "PartialPressure", "Unit": "mmHg"},
{ "DecimalFormat": { }, "Category": "GasCompartment", "CompartmentName": "Carina", "SubstanceName": "Oxygen", "PropertyName": "PartialPressure", "Unit": "cmH2O" },
{ "DecimalFormat": { "Precision": 1 }, "Category": "GasCompartment", "CompartmentName": "Carina", "SubstanceName": "CarbonDioxide", "PropertyName": "PartialPressure", "Unit": "cmH2O" },
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{ "DecimalFormat": { "Precision": 1 }, "Category": "LiquidCompartment", "CompartmentName": "VenaCava", "SubstanceName": "CarbonDioxide", "PropertyName": "PartialPressure", "Unit": "mmHg" },
{ "DecimalFormat": { "Precision": 2 }, "Category": "LiquidCompartment", "CompartmentName": "RightTubules", "SubstanceName": "Sodium", "PropertyName": "Concentration", "Unit": "g/L" },
{ "DecimalFormat": { "Precision": 2 }, "Category": "LiquidCompartment", "CompartmentName": "LeftTubules", "SubstanceName": "Sodium", "PropertyName": "Concentration", "Unit": "g/L" },
{ "DecimalFormat": { "Precision": 2 }, "Category": "Substance", "SubstanceName": "Oxygen", "PropertyName": "AlveolarTransfer", "Unit": "mL/s" },
{ "DecimalFormat": { "Precision": 2 }, "Category": "Substance", "SubstanceName": "CarbonDioxide", "PropertyName": "AlveolarTransfer", "Unit": "mL/s" },
{ "DecimalFormat": { "Precision": 6 }, "Category": "Substance", "SubstanceName": "Epinephrine", "PropertyName": "BloodConcentration", "Unit": "ug/L" },
{ "DecimalFormat": { "Precision": 8 }, "Category": "Substance", "SubstanceName": "Epinephrine", "PropertyName": "SystemicMassCleared", "Unit": "ug" },
{ "DecimalFormat": { "Precision": 3 }, "Category": "Physiology", "PropertyName": "SystemicVascularResistance", "Unit": "mmHg s/mL"}
]
},
"AnyAction": [{
"AdvanceTime": {
......
{
"Name": "HemorrhageCM2",
"Description": "Bleeding in the right leg and vena cava, morphine injection, and iv administration.",
"StartType": {
"Description": "",
"StartType":
{
"PatientConfiguration": {
"PatientFile": "StandardMale.json"
}
},
"DataRequestManager": {
"DataRequest": [{
"DecimalFormat": {
"Precision": 1
},
"PropertyName": "Weight",
"Unit": "kg"
}, {
"DecimalFormat": {
"Precision": 2
},
"Category": "Physiology",
"PropertyName": "HeartRate",
"Unit": "1/min"
}, {
"DecimalFormat": {
"Precision": 1
},