Commit 3a1707e8 authored by Rachel Clipp's avatar Rachel Clipp
Browse files

Merge branch 'feature/documentation' of...

Merge branch 'feature/documentation' of https://gitlab.kitware.com/physiology/engine into feature/documentation
parents 353f0d30 ec7dbded
......@@ -143,24 +143,20 @@ FireFighter=ActionEventPlotter Header=RightAlveoli-ForestFireParticulate-MassDep
FireFighter=ActionEventPlotter Header=RightAnatomicDeadSpace-ForestFireParticulate-MassDeposited(ug) VerificationDir=energyenvironment Title=DeadSpaceMassDeposited(ug) Y1Label=MassDeposited(ug) OutputOverride=./docs/html/plots/Environment RemoveLegends NoActions NoEvents
##### GI Methodology Report #####
12hrFast=ActionEventPlotter Header=BloodVolume(L) VerificationDir=miscellaneous RemoveLegends OutputOverride=./docs/html/plots/GI OutputFilename=12hr_BV.jpg
12hrFast=ActionEventPlotter Header=Calcium-BloodConcentration(mg/L) VerificationDir=miscellaneous RemoveLegends OutputOverride=./docs/html/plots/GI OutputFilename=12hr_BloodCalcium.jpg
12hrFast=ActionEventPlotter Header=Glucose-BloodConcentration(mg/dL) VerificationDir=miscellaneous RemoveLegends OutputOverride=./docs/html/plots/GI OutputFilename=12hr_BloodGlucose.jpg
12hrFast=ActionEventPlotter Header=SmallIntestineChyme-Calcium-Mass(g) VerificationDir=miscellaneous RemoveLegends OutputOverride=./docs/html/plots/GI OutputFilename=12hr_IntestineCalcium.jpg
12hrFast=ActionEventPlotter Header=SmallIntestineChyme-Glucose-Mass(g) VerificationDir=miscellaneous RemoveLegends OutputOverride=./docs/html/plots/GI OutputFilename=12hr_IntestineGlucose.jpg
12hrFast=ActionEventPlotter Header=SmallIntestineChyme-Sodium-Mass(g) VerificationDir=miscellaneous RemoveLegends OutputOverride=./docs/html/plots/GI OutputFilename=12hr_IntestineSodium.jpg
12hrFast=ActionEventPlotter Header=SmallIntestineChyme-Tristearin-Mass(g) VerificationDir=miscellaneous RemoveLegends OutputOverride=./docs/html/plots/GI OutputFilename=12hr_IntestineTristearin.jpg
12hrFast=ActionEventPlotter Header=SmallIntestineChyme-Urea-Mass(g) VerificationDir=miscellaneous RemoveLegends OutputOverride=./docs/html/plots/GI OutputFilename=12hr_IntestineUrea.jpg
12hrFast=ActionEventPlotter Header=SmallIntestineChyme-Volume(mL) VerificationDir=miscellaneous RemoveLegends OutputOverride=./docs/html/plots/GI OutputFilename=12hr_IntestineVolume.jpg
12hrFast=ActionEventPlotter Header=Sodium-BloodConcentration(g/dL) VerificationDir=miscellaneous RemoveLegends OutputOverride=./docs/html/plots/GI OutputFilename=12hr_BloodSodium.jpg
12hrFast=ActionEventPlotter Header=StomachContents-Calcium(g) VerificationDir=miscellaneous RemoveLegends OutputOverride=./docs/html/plots/GI OutputFilename=12hr_StomachCalcium.jpg
12hrFast=ActionEventPlotter Header=StomachContents-Carbohydrate(g) VerificationDir=miscellaneous RemoveLegends OutputOverride=./docs/html/plots/GI OutputFilename=12hr_StomachCarbs.jpg
12hrFast=ActionEventPlotter Header=StomachContents-Fat(g) VerificationDir=miscellaneous RemoveLegends OutputOverride=./docs/html/plots/GI OutputFilename=12hr_StomachFat.jpg
12hrFast=ActionEventPlotter Header=StomachContents-Protein(g) VerificationDir=miscellaneous RemoveLegends OutputOverride=./docs/html/plots/GI OutputFilename=12hr_StomachProtein.jpg
12hrFast=ActionEventPlotter Header=StomachContents-Sodium(g) VerificationDir=miscellaneous RemoveLegends OutputOverride=./docs/html/plots/GI OutputFilename=12hr_StomachSodium.jpg
12hrFast=ActionEventPlotter Header=StomachContents-Water(mL) VerificationDir=miscellaneous RemoveLegends OutputOverride=./docs/html/plots/GI OutputFilename=12hr_StomachWater.jpg
12hrFast=ActionEventPlotter Header=Tristearin-BloodConcentration(mg/dL) VerificationDir=miscellaneous RemoveLegends OutputOverride=./docs/html/plots/GI OutputFilename=12hr_BloodTristearin.jpg
12hrFast=ActionEventPlotter Header=Urea-BloodConcentration(mg/dL) VerificationDir=miscellaneous RemoveLegends OutputOverride=./docs/html/plots/GI OutputFilename=12hr_BloodUrea.jpg
Nutrition=ActionEventPlotter Header=BloodVolume(L) VerificationDir=nutrition RemoveLegends OutputOverride=./docs/html/plots/GI OutputFilename=4hr_BV.jpg
Nutrition=ActionEventPlotter Header=Calcium-BloodConcentration(mg/L) VerificationDir=nutrition RemoveLegends OutputOverride=./docs/html/plots/GI OutputFilename=4hr_BloodCalcium.jpg
Nutrition=ActionEventPlotter Header=Glucose-BloodConcentration(mg/dL) VerificationDir=nutrition RemoveLegends OutputOverride=./docs/html/plots/GI OutputFilename=4hr_BloodGlucose.jpg
Nutrition=ActionEventPlotter Header=Insulin-BloodConcentration(ug/L) VerificationDir=nutrition RemoveLegends OutputOverride=./docs/html/plots/GI OutputFilename=4hr_BloodInsulin.jpg
Nutrition=ActionEventPlotter Header=SmallIntestineChyme-Volume(mL) VerificationDir=nutrition RemoveLegends OutputOverride=./docs/html/plots/GI OutputFilename=4hr_IntestineVolume.jpg
Nutrition=ActionEventPlotter Header=Sodium-BloodConcentration(g/dL) VerificationDir=nutrition RemoveLegends OutputOverride=./docs/html/plots/GI OutputFilename=4hr_BloodSodium.jpg
Nutrition=ActionEventPlotter Header=Tristearin-BloodConcentration(mg/dL) VerificationDir=nutrition RemoveLegends OutputOverride=./docs/html/plots/GI OutputFilename=4hr_BloodTristearin.jpg
Nutrition=ActionEventPlotter Header=Urea-BloodConcentration(mg/dL) VerificationDir=nutrition RemoveLegends OutputOverride=./docs/html/plots/GI OutputFilename=4hr_BloodUrea.jpg
Nutrition=ActionEventPlotter Header=StomachContents-Calcium(g) VerificationDir=nutrition RemoveLegends OutputOverride=./docs/html/plots/GI OutputFilename=4hr_StomachCalcium.jpg
Nutrition=ActionEventPlotter Header=StomachContents-Carbohydrate(g) VerificationDir=nutrition RemoveLegends OutputOverride=./docs/html/plots/GI OutputFilename=4hr_StomachCarbs.jpg
Nutrition=ActionEventPlotter Header=StomachContents-Fat(g) VerificationDir=nutrition RemoveLegends OutputOverride=./docs/html/plots/GI OutputFilename=4hr_StomachFat.jpg
Nutrition=ActionEventPlotter Header=StomachContents-Protein(g) VerificationDir=nutrition RemoveLegends OutputOverride=./docs/html/plots/GI OutputFilename=4hr_StomachProtein.jpg
Nutrition=ActionEventPlotter Header=StomachContents-Sodium(g) VerificationDir=nutrition RemoveLegends OutputOverride=./docs/html/plots/GI OutputFilename=4hr_StomachSodium.jpg
Nutrition=ActionEventPlotter Header=StomachContents-Water(mL) VerificationDir=nutrition RemoveLegends OutputOverride=./docs/html/plots/GI OutputFilename=4hr_StomachWater.jpg
##### Nervous Methodology Report #####
BaroreceptorMethodology=MultiPlotter X1=normMAP Y1=SympatheticResponse,ParasympatheticResponse VerificationDir=patient Title=Response_Fractions X1Label=MeanArterialPressure(Normalized) Y1Label=Response(Fraction) OutputOverride=./docs/html/plots/Nervous X1LowerBound=0.0 X1UpperBound=2.5 NoGrid ImageDimensions=800,600 DataPathValidationOverride=Waveforms/
......@@ -196,7 +192,7 @@ HighAltitudeEnvironmentChange=ActionEventPlotter NoGrid NoActions Title=None Hea
HighAltitudeEnvironmentChange=ActionEventPlotter NoGrid NoActions Title=None Header=RenalBloodFlow(L/min) VerificationDir=energyenvironment RemoveLegends FontSize=17 OutputOverride=./docs/html/plots/Renal/ ImageDimensions=800,400 OutputFilename=AltitudeRBF.jpg
HighAltitudeEnvironmentChange=ActionEventPlotter NoGrid NoActions Title=None Header=RightAfferentArterioleResistance(mmHg_min/mL) VerificationDir=energyenvironment FontSize=17 RemoveLegends OutputOverride=./docs/html/plots/Renal/ ImageDimensions=800,400 OutputFilename=AltitudeArterioleResistance.jpg
HighAltitudeEnvironmentChange=ActionEventPlotter LegendOnly ActionsOnly Header=RightAfferentArterioleResistance(mmHg_min/mL) Title=HighAltitudeEnvironmentChangeLegend VerificationDir=energyenvironment OutputOverride=./docs/html/plots/Renal/ NoEvents ImageDimensions=480,300
12hrFast=ActionEventPlotter Header=Bladder-Volume(mL) VerificationDir=miscellaneous RemoveLegends OutputOverride=./docs/html/plots/Renal OutputFilename=12hr_Urination.jpg
Nutrition=ActionEventPlotter Header=Bladder-Volume(mL) VerificationDir=nutrition RemoveLegends OutputOverride=./docs/html/plots/Renal OutputFilename=4hr_Urination.jpg
RenalTGFFeedbackOutput=MultiPlotter Y1=GlomerularFiltrationRate(L/min) FontSize=34 X1=MeanArterialPressure(mmHg) Title=None ValidationData=Renal/MAP_vs_GFR.csv DataPathVerificationOverride=unit_tests/pulse/ X2=MeanArterialPressure(mmHg) OutputOverride=./docs/html/plots/Renal/ Y2=GlomerularFiltrationRate(L/min) X1LowerBound=60 X1UpperBound=200 Y1LowerBound=.09 Y2LowerBound=.09 Y1UpperBound=.16 Y2UpperBound=.16 OutputOverride=./docs/html/plots/Renal/ NoGrid RemoveLegends DataFileOverride=RenalTGFFeedbackOutput.csv OutputFilename=MAP_vs_GFR.jpg
RenalTGFFeedbackOutput=MultiPlotter Y1=RenalBloodFlow(L/min) X1=MeanArterialPressure(mmHg) Title=None FontSize=34 ValidationData=Renal/MAP_vs_RBF.csv DataPathVerificationOverride=unit_tests/pulse/ X2=MeanArterialPressure(mmHg) Y2=RenalBloodFlow(L/min) X1LowerBound=60 X1UpperBound=200 Y1LowerBound=1 Y2LowerBound=1 Y1UpperBound=1.7 Y2UpperBound=1.7 OutputOverride=./docs/html/plots/Renal/ NoGrid RemoveLegends OutputOverride=./docs/html/plots/Renal/ DataFileOverride=RenalTGFFeedbackOutput.csv OutputFilename=MAP_vs_RBF.jpg
RenalTGFandUPRFeedbackOutput=MultiPlotter Y1=UrineProductionRate(mL/min) X1=MeanArterialPressure(mmHg) Title=None FontSize=34 ValidationData=Renal/MAP_vs_UPR.csv DataPathVerificationOverride=unit_tests/pulse/ NoGrid X2=MeanArterialPressure(mmHg) Y2=UrineProductionRate(mL/min) X1LowerBound=60 X1UpperBound=200 Y1LowerBound=0 Y2LowerBound=0 Y1UpperBound=8 Y2UpperBound=8 OutputOverride=./docs/html/plots/Renal/ RemoveLegends OutputOverride=./docs/html/plots/Renal/ DataFileOverride=RenalTGFandUPRFeedbackOutput.csv OutputFilename=MAP_vs_UPR.jpg
......
......@@ -52,17 +52,14 @@ patient/CPRForce.json = ScenarioTest
patient/DyspneaVaried.json = ScenarioTest
patient/EffusionCondition.json = ScenarioTest
patient/EffusionConditionPlus.json = ScenarioTest
patient/HemorrhageClass1NoFluid.json = ScenarioTest
patient/HemorrhageClass2Blood.json = ScenarioTest
patient/HemorrhageClass2BrachialArtery.json = ScenarioTest
patient/HemorrhageClass2FemoralArtery.json = ScenarioTest
patient/HemorrhageClass2InternalMultiple.json = ScenarioTest
patient/HemorrhageClass2InternalSpleen.json = ScenarioTest
patient/HemorrhageClass2NoFluid.json = ScenarioTest
patient/HemorrhageClass2Saline.json = ScenarioTest
patient/HemorrhageClass3NoFluid.json = ScenarioTest
patient/HemorrhageClass3PackedRBC.json = ScenarioTest
patient/HemorrhageClass4NoFluid.json = ScenarioTest
patient/HemorrhageGroup1.json = ScenarioTest
patient/HemorrhageGroup2.json = ScenarioTest
patient/HemorrhageGroup3.json = ScenarioTest
......@@ -84,6 +81,13 @@ patient/TensionPneumothoraxBilateral.json = ScenarioTest
patient/TensionPneumothoraxClosedVaried.json = ScenarioTest
patient/TensionPneumothoraxOpenVaried.json = ScenarioTest
*patient/VentricularSystolicDysfunction.json = ScenarioTest
patient/ZeroAnemia.json = ScenarioTest
patient/ZeroARDS.json = ScenarioTest
patient/ZeroCOPD.json = ScenarioTest
patient/ZeroLobarPneumonia.json = ScenarioTest
patient/ZeroPericardialEffusion.json = ScenarioTest
patient/ZeroPulmonaryFibrosis.json = ScenarioTest
patient/ZeroRenalStenosis.json = ScenarioTest
@group EnergyEnvironment
energyenvironment/AlveolarArterialGradientEnvironments.json = ScenarioTest
......@@ -183,6 +187,8 @@ miscellaneous/SpirometryComparison.json = ScenarioTest
miscellaneous/SpirometryHealthy.json = ScenarioTest
miscellaneous/SpirometryPulmonaryFibrosis.json = ScenarioTest
miscellaneous/TBIandDrugs.json = ScenarioTest
miscellaneous/ZeroImpairedAlveolarExchange.json = ScenarioTest
miscellaneous/ZeroPulmonaryShunt.json = ScenarioTest
@group Compartments
......
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\ No newline at end of file
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\ No newline at end of file
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\ No newline at end of file
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\ No newline at end of file
{
"Name": "Anemia0",
"Description": "Ensure a 0 severity has no impact on the patient",
"PatientConfiguration": {
"PatientFile": "StandardMale.json",
"Conditions": { "AnyCondition": [{
"PatientCondition": {
"ImpairedAlveolarExchange": {
"Severity": {
"Scalar0To1": {
"Value": 0.0
}
}
}
}
}]}
},
"DataRequestManager":
{
"DataRequest":
[
{ "DecimalFormat": { "Precision": 1 }, "Category": "Patient", "PropertyName": "Weight", "Unit": "kg" },
{ "DecimalFormat": { "Precision": 2 }, "Category": "Physiology", "PropertyName": "HeartRate", "Unit": "1/min" },
{ "DecimalFormat": { "Precision": 1 }, "Category": "Physiology", "PropertyName": "HeartStrokeVolume", "Unit": "mL" },
{ "DecimalFormat": { "Precision": 2 }, "Category": "Physiology", "PropertyName": "BloodVolume", "Unit": "L" },
{ "DecimalFormat": { "Precision": 1 }, "Category": "Physiology", "PropertyName": "ExtravascularFluidVolume", "Unit": "L" },
{ "DecimalFormat": { "Precision": 1 }, "Category": "Physiology", "PropertyName": "ArterialPressure", "Unit": "mmHg" },
{ "DecimalFormat": { "Precision": 1 }, "Category": "Physiology", "PropertyName": "MeanArterialPressure", "Unit": "mmHg" },
{ "DecimalFormat": { }, "Category": "Physiology", "PropertyName": "SystolicArterialPressure", "Unit": "mmHg" },
{ "DecimalFormat": { "Precision": 1 }, "Category": "Physiology", "PropertyName": "DiastolicArterialPressure", "Unit": "mmHg" },
{ "DecimalFormat": { "Precision": 2 }, "Category": "Physiology", "PropertyName": "CardiacOutput", "Unit": "L/min" },
{ "DecimalFormat": { }, "Category": "Physiology", "PropertyName": "HemoglobinContent", "Unit": "g" },
{ "DecimalFormat": { "Precision": 2 }, "Category": "Physiology", "PropertyName": "CentralVenousPressure", "Unit": "mmHg" },
{ "DecimalFormat": { "Precision": 2 }, "Category": "Physiology", "PropertyName": "PulmonaryCapillariesWedgePressure", "Unit": "mmHg" },
{ "DecimalFormat": { "Precision": 3 }, "Category": "Physiology", "PropertyName": "TidalVolume", "Unit": "mL" },
{ "DecimalFormat": { "Precision": 2 }, "Category": "Physiology", "PropertyName": "TotalLungVolume", "Unit": "L" },
{ "DecimalFormat": { "Precision": 2 }, "Category": "Physiology", "PropertyName": "RespirationRate", "Unit": "1/min" },
{ "DecimalFormat": { "Precision": 3 }, "Category": "Physiology", "PropertyName": "OxygenSaturation", "Unit": "unitless" },
{ "DecimalFormat": { "Precision": 3 }, "Category": "Physiology", "PropertyName": "CarbonDioxideSaturation", "Unit": "unitless" },
{ "DecimalFormat": { "Precision": 4 }, "Category": "Physiology", "PropertyName": "EndTidalCarbonDioxideFraction", "Unit": "unitless" },
{ "DecimalFormat": { "Precision": 2 }, "Category": "Physiology", "PropertyName": "TotalAlveolarVentilation", "Unit": "L/min" },
{ "DecimalFormat": { "Precision": 2 }, "Category": "Physiology", "PropertyName": "TranspulmonaryPressure", "Unit": "cmH2O" },
{ "DecimalFormat": { "Precision": 1 }, "Category": "Physiology", "PropertyName": "CoreTemperature", "Unit": "degC" },
{ "DecimalFormat": { "Precision": 1 }, "Category": "Physiology", "PropertyName": "SkinTemperature", "Unit": "degC" },
{ "DecimalFormat": { "Precision": 3 }, "Category": "Physiology", "PropertyName": "RespiratoryExchangeRatio", "Unit": "unitless" },
{ "DecimalFormat": { }, "Category": "Physiology", "PropertyName": "OxygenConsumptionRate", "Unit": "mL/min" },
{ "DecimalFormat": { }, "Category": "Physiology", "PropertyName": "CarbonDioxideProductionRate", "Unit": "mL/min" },
{ "DecimalFormat": { }, "Category": "Physiology", "PropertyName": "GlomerularFiltrationRate", "Unit": "mL/min" },
{ "DecimalFormat": { "Precision": 2 }, "Category": "Physiology", "PropertyName": "RenalBloodFlow", "Unit": "L/min" },
{ "DecimalFormat": { "Precision": 3 }, "Category": "Physiology", "PropertyName": "UrineProductionRate", "Unit": "mL/min" },
{ "DecimalFormat": { "Precision": 4 }, "Category": "Physiology", "PropertyName": "LeftAfferentArterioleResistance", "Unit": "mmHg min/mL" },
{ "DecimalFormat": { "Precision": 4 }, "Category": "Physiology", "PropertyName": "RightAfferentArterioleResistance", "Unit": "mmHg min/mL" },
{ "DecimalFormat": { }, "Category": "GasCompartment", "CompartmentName": "LeftAlveoli", "PropertyName": "Pressure", "Unit": "cmH2O" },
{ "DecimalFormat": { }, "Category": "GasCompartment", "CompartmentName": "RightAlveoli", "PropertyName": "Pressure", "Unit": "cmH2O" },
{ "DecimalFormat": { }, "Category": "GasCompartment", "CompartmentName": "Carina", "SubstanceName": "Oxygen", "PropertyName": "PartialPressure", "Unit": "cmH2O" },
{ "DecimalFormat": { "Precision": 1 }, "Category": "GasCompartment", "CompartmentName": "Carina", "SubstanceName": "CarbonDioxide", "PropertyName": "PartialPressure", "Unit": "cmH2O" },
{ "DecimalFormat": { "Precision": 1 }, "Category": "GasCompartment", "CompartmentName": "LeftLungPulmonary", "SubstanceName": "Oxygen", "PropertyName": "PartialPressure", "Unit": "mmHg" },
{ "DecimalFormat": { "Precision": 1 }, "Category": "GasCompartment", "CompartmentName": "RightLungPulmonary", "SubstanceName": "Oxygen", "PropertyName": "PartialPressure", "Unit": "mmHg" },
{ "DecimalFormat": { "Precision": 1 }, "Category": "GasCompartment", "CompartmentName": "LeftLungPulmonary", "SubstanceName": "CarbonDioxide", "PropertyName": "PartialPressure", "Unit": "mmHg" },
{ "DecimalFormat": { "Precision": 1 }, "Category": "GasCompartment", "CompartmentName": "RightLungPulmonary", "SubstanceName": "CarbonDioxide", "PropertyName": "PartialPressure", "Unit": "mmHg" },
{ "DecimalFormat": { }, "Category": "GasCompartment", "CompartmentName": "LeftAlveoli", "SubstanceName": "Oxygen", "PropertyName": "PartialPressure", "Unit": "mmHg" },
{ "DecimalFormat": { "Precision": 1 }, "Category": "GasCompartment", "CompartmentName": "LeftAlveoli", "SubstanceName": "CarbonDioxide", "PropertyName": "PartialPressure", "Unit": "mmHg" },
{ "DecimalFormat": { }, "Category": "GasCompartment", "CompartmentName": "RightAlveoli", "SubstanceName": "Oxygen", "PropertyName": "PartialPressure", "Unit": "mmHg" },
{ "DecimalFormat": { "Precision": 1 }, "Category": "GasCompartment", "CompartmentName": "RightAlveoli", "SubstanceName": "CarbonDioxide", "PropertyName": "PartialPressure", "Unit": "mmHg"},
{ "DecimalFormat": { "Precision": 1 }, "Category": "LiquidCompartment", "CompartmentName": "Aorta", "SubstanceName": "Oxygen", "PropertyName": "PartialPressure", "Unit": "mmHg" },
{ "DecimalFormat": { "Precision": 1 }, "Category": "LiquidCompartment", "CompartmentName": "Aorta", "SubstanceName": "CarbonDioxide", "PropertyName": "PartialPressure", "Unit": "mmHg" },
{ "DecimalFormat": { "Precision": 1 }, "Category": "LiquidCompartment", "CompartmentName": "VenaCava", "SubstanceName": "Oxygen", "PropertyName": "PartialPressure", "Unit": "mmHg" },
{ "DecimalFormat": { "Precision": 1 }, "Category": "LiquidCompartment", "CompartmentName": "VenaCava", "SubstanceName": "CarbonDioxide", "PropertyName": "PartialPressure", "Unit": "mmHg" },
{ "DecimalFormat": { "Precision": 2 }, "Category": "LiquidCompartment", "CompartmentName": "RightTubules", "SubstanceName": "Sodium", "PropertyName": "Concentration", "Unit": "g/L" },
{ "DecimalFormat": { "Precision": 2 }, "Category": "LiquidCompartment", "CompartmentName": "LeftTubules", "SubstanceName": "Sodium", "PropertyName": "Concentration", "Unit": "g/L" },
{ "DecimalFormat": { "Precision": 2 }, "Category": "Substance", "SubstanceName": "Oxygen", "PropertyName": "AlveolarTransfer", "Unit": "mL/s" },
{ "DecimalFormat": { "Precision": 2 }, "Category": "Substance", "SubstanceName": "CarbonDioxide", "PropertyName": "AlveolarTransfer", "Unit": "mL/s" },
{ "DecimalFormat": { "Precision": 6 }, "Category": "Substance", "SubstanceName": "Epinephrine", "PropertyName": "BloodConcentration", "Unit": "ug/L" },
{ "DecimalFormat": { "Precision": 8 }, "Category": "Substance", "SubstanceName": "Epinephrine", "PropertyName": "SystemicMassCleared", "Unit": "ug" },
{ "DecimalFormat": { "Precision": 3 }, "Category": "Physiology", "PropertyName": "HeartEjectionFraction" },
{ "DecimalFormat": { "Precision": 3 }, "Category": "Physiology", "PropertyName": "SystemicVascularResistance", "Unit": "mmHg s/mL" },
{ "DecimalFormat": { }, "Category": "LiquidCompartment", "CompartmentName": "Pericardium", "PropertyName": "Volume", "Unit": "mL" },
{ "DecimalFormat": { "Precision": 2 }, "Category": "LiquidCompartment", "CompartmentName": "Pericardium", "PropertyName": "Pressure", "Unit": "mmHg" }
]
},
"AnyAction":
[
{ "AdvanceTime": {
"Action": { "Comment": "Advance some time" },
"Time": { "ScalarTime": { "Value": 2, "Unit": "min" }}}}
]
}
\ No newline at end of file
{
"Name": "Anemia0",
"Description": "Ensure a 0 severity has no impact on the patient",
"PatientConfiguration": {
"PatientFile": "StandardMale.json",
"Conditions": { "AnyCondition": [{
"PatientCondition": {
"PulmonaryShunt": {
"Severity": {
"Scalar0To1": {
"Value": 0.0
}
}
}
}
}]}
},
"DataRequestManager":
{
"DataRequest":
[
{ "DecimalFormat": { "Precision": 1 }, "Category": "Patient", "PropertyName": "Weight", "Unit": "kg" },
{ "DecimalFormat": { "Precision": 2 }, "Category": "Physiology", "PropertyName": "HeartRate", "Unit": "1/min" },
{ "DecimalFormat": { "Precision": 1 }, "Category": "Physiology", "PropertyName": "HeartStrokeVolume", "Unit": "mL" },
{ "DecimalFormat": { "Precision": 2 }, "Category": "Physiology", "PropertyName": "BloodVolume", "Unit": "L" },
{ "DecimalFormat": { "Precision": 1 }, "Category": "Physiology", "PropertyName": "ExtravascularFluidVolume", "Unit": "L" },
{ "DecimalFormat": { "Precision": 1 }, "Category": "Physiology", "PropertyName": "ArterialPressure", "Unit": "mmHg" },
{ "DecimalFormat": { "Precision": 1 }, "Category": "Physiology", "PropertyName": "MeanArterialPressure", "Unit": "mmHg" },
{ "DecimalFormat": { }, "Category": "Physiology", "PropertyName": "SystolicArterialPressure", "Unit": "mmHg" },
{ "DecimalFormat": { "Precision": 1 }, "Category": "Physiology", "PropertyName": "DiastolicArterialPressure", "Unit": "mmHg" },
{ "DecimalFormat": { "Precision": 2 }, "Category": "Physiology", "PropertyName": "CardiacOutput", "Unit": "L/min" },
{ "DecimalFormat": { }, "Category": "Physiology", "PropertyName": "HemoglobinContent", "Unit": "g" },
{ "DecimalFormat": { "Precision": 2 }, "Category": "Physiology", "PropertyName": "CentralVenousPressure", "Unit": "mmHg" },
{ "DecimalFormat": { "Precision": 2 }, "Category": "Physiology", "PropertyName": "PulmonaryCapillariesWedgePressure", "Unit": "mmHg" },
{ "DecimalFormat": { "Precision": 3 }, "Category": "Physiology", "PropertyName": "TidalVolume", "Unit": "mL" },
{ "DecimalFormat": { "Precision": 2 }, "Category": "Physiology", "PropertyName": "TotalLungVolume", "Unit": "L" },
{ "DecimalFormat": { "Precision": 2 }, "Category": "Physiology", "PropertyName": "RespirationRate", "Unit": "1/min" },
{ "DecimalFormat": { "Precision": 3 }, "Category": "Physiology", "PropertyName": "OxygenSaturation", "Unit": "unitless" },
{ "DecimalFormat": { "Precision": 3 }, "Category": "Physiology", "PropertyName": "CarbonDioxideSaturation", "Unit": "unitless" },
{ "DecimalFormat": { "Precision": 4 }, "Category": "Physiology", "PropertyName": "EndTidalCarbonDioxideFraction", "Unit": "unitless" },
{ "DecimalFormat": { "Precision": 2 }, "Category": "Physiology", "PropertyName": "TotalAlveolarVentilation", "Unit": "L/min" },
{ "DecimalFormat": { "Precision": 2 }, "Category": "Physiology", "PropertyName": "TranspulmonaryPressure", "Unit": "cmH2O" },
{ "DecimalFormat": { "Precision": 1 }, "Category": "Physiology", "PropertyName": "CoreTemperature", "Unit": "degC" },
{ "DecimalFormat": { "Precision": 1 }, "Category": "Physiology", "PropertyName": "SkinTemperature", "Unit": "degC" },
{ "DecimalFormat": { "Precision": 3 }, "Category": "Physiology", "PropertyName": "RespiratoryExchangeRatio", "Unit": "unitless" },
{ "DecimalFormat": { }, "Category": "Physiology", "PropertyName": "OxygenConsumptionRate", "Unit": "mL/min" },
{ "DecimalFormat": { }, "Category": "Physiology", "PropertyName": "CarbonDioxideProductionRate", "Unit": "mL/min" },
{ "DecimalFormat": { }, "Category": "Physiology", "PropertyName": "GlomerularFiltrationRate", "Unit": "mL/min" },
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