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Commit 161051dd authored by Aaron Bray's avatar Aaron Bray
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Fix several issues in setting up action data requests 

Fixed an invalid data request in the Hemorrhage Groups
parent 395fd01a
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Showing with 138 additions and 62 deletions
data/config/DebugRun.config
View file @ 161051dd
......@@ -32,6 +32,44 @@ Macro EngineUnitTestFull=EngineUnitTestDriver FullPlot Baseline=unit_tests/pulse
Macro ScenarioTest=ScenarioTestDriver FastPlot Baseline=scenarios/ Computed=./test_results/scenarios
#patient/BasicStandard.json = ScenarioTest
patient/HemorrhageSeverity1.json = ScenarioTest
patient/HemorrhageVaryingSeverity.json = ScenarioTest
#patient/HemorrhageClass1Femoral.json = ScenarioTest
#patient/HemorrhageClass2Blood.json = ScenarioTest
#patient/HemorrhageClass2BrachialArtery.json = ScenarioTest
#patient/HemorrhageClass2InternalMultiple.json = ScenarioTest
#patient/HemorrhageClass2InternalSpleen.json = ScenarioTest
#patient/HemorrhageClass2NoFluid.json = ScenarioTest
#patient/HemorrhageClass2Saline.json = ScenarioTest
#patient/HemorrhageClass3NoFluid.json = ScenarioTest
#patient/HemorrhageClass3PackedRBC.json = ScenarioTest
#patient/HemorrhageClass4NoFluid.json = ScenarioTest
#patient/HemorrhageGroup1.json = ScenarioTest
#patient/HemorrhageGroup2.json = ScenarioTest
#patient/HemorrhageGroup3.json = ScenarioTest
#patient/HemorrhageGroup4.json = ScenarioTest
#patient/HemorrhageGroup5.json = ScenarioTest
#patient/HemorrhageGroup6.json = ScenarioTest
#patient/HemorrhageInternalSeverity.json = ScenarioTest
#patient/HemorrhageSeverity1.json = ScenarioTest
#patient/HemorrhageSeverityMultipleCompartments.json = ScenarioTest
#patient/HemorrhageSeverityToFlowToSeverity.json = ScenarioTest
#patient/HemorrhageToShock.json = ScenarioTest
#patient/HemorrhageVaryingSeverity.json = ScenarioTest
#drug/Albuterol.json = ScenarioTest
#drug/Desflurane.json = ScenarioTest
#drug/Epinephrine.json = ScenarioTest
drug/Fentanyl.json = ScenarioTest
drug/Furosemide.json = ScenarioTest
drug/Ketamine.json = ScenarioTest
drug/Midazolam.json = ScenarioTest
drug/Morphine.json = ScenarioTest
drug/Naloxone.json = ScenarioTest
#drug/Norepinephrine.json = ScenarioTest
drug/NorepinephrineBolus.json = ScenarioTest
drug/Pralidoxime.json = ScenarioTest
drug/Prednisone.json = ScenarioTest
drug/Propofol.json = ScenarioTest
drug/Rocuronium.json = ScenarioTest
drug/Succinylcholine.json = ScenarioTest
data/human/adult/scenarios/patient/HemorrhageGroup1.json
View file @ 161051dd
......@@ -20,13 +20,13 @@
{ "DecimalFormat": { "Precision": 3 }, "Category": "Physiology", "PropertyName": "TidalVolume", "Unit": "mL" },
{ "DecimalFormat": { "Precision": 2 }, "Category": "Physiology", "PropertyName": "RespirationRate", "Unit": "1/min" },
{ "DecimalFormat": { "Precision": 3 }, "Category": "Physiology", "PropertyName": "OxygenSaturation", "Unit": "unitless" },
{ "DecimalFormat": { "Precision": 4 }, "Category": "LiquidCompartment", "CompartmentName": "MyocardiumVasculature", "SubstanceName": "Oxygen", "PropertyName": "PartialPressure", "Unit": "mmHg" },
{ "DecimalFormat": { "Precision": 4 }, "Category": "LiquidCompartment", "CompartmentName": "BrainVasculature", "SubstanceName": "Oxygen", "PropertyName": "PartialPressure", "Unit": "mmHg" },
{ "DecimalFormat": { "Precision": 4 }, "Category": "LiquidCompartment", "CompartmentName": "MyocardiumVasculature", "PropertyName": "InFlow", "Unit": "mL/min" },
{ "DecimalFormat": { "Precision": 4 }, "Category": "LiquidCompartment", "CompartmentName": "BrainVasculature", "PropertyName": "InFlow", "Unit": "mL/min" },
{ "DecimalFormat": { "Precision": 4 }, "Category": "LiquidCompartment", "CompartmentName": "VenaCava", "PropertyName": "InFlow", "Unit": "mL/min" },
{ "DecimalFormat": { "Precision": 4 }, "Category": "LiquidCompartment", "CompartmentName": "RightHeartVasculature", "PropertyName": "InFlow", "Unit": "mL/min" },
{ "DecimalFormat": { "Precision": 4 }, "Category": "LiquidCompartment", "CompartmentName": "MyocardiumVasculature", "SubstanceName": "Oxygen", "PropertyName": "PartialPressure", "Unit": "mmHg" },
{ "DecimalFormat": { "Precision": 4 }, "Category": "LiquidCompartment", "CompartmentName": "BrainVasculature", "SubstanceName": "Oxygen", "PropertyName": "PartialPressure", "Unit": "mmHg" },
{ "DecimalFormat": { "Precision": 4 }, "Category": "LiquidCompartment", "CompartmentName": "MyocardiumVasculature", "PropertyName": "InFlow", "Unit": "mL/min" },
{ "DecimalFormat": { "Precision": 4 }, "Category": "LiquidCompartment", "CompartmentName": "BrainVasculature", "PropertyName": "InFlow", "Unit": "mL/min" },
{ "DecimalFormat": { "Precision": 4 }, "Category": "LiquidCompartment", "CompartmentName": "VenaCava", "PropertyName": "InFlow", "Unit": "mL/min" },
{ "DecimalFormat": { "Precision": 4 }, "Category": "LiquidCompartment", "CompartmentName": "RightHeart", "PropertyName": "InFlow", "Unit": "mL/min" },
{ "DecimalFormat": { "Precision": 3 }, "Category": "Physiology", "PropertyName": "SystemicVascularResistance", "Unit": "mmHg s/mL"},
{ "DecimalFormat": { "Precision": 3 }, "Category": "Physiology", "PropertyName": "TotalHemorrhageRate", "Unit": "mL/s"},
......
data/human/adult/scenarios/patient/HemorrhageGroup2.json
View file @ 161051dd
......@@ -20,13 +20,13 @@
{ "DecimalFormat": { "Precision": 3 }, "Category": "Physiology", "PropertyName": "TidalVolume", "Unit": "mL" },
{ "DecimalFormat": { "Precision": 2 }, "Category": "Physiology", "PropertyName": "RespirationRate", "Unit": "1/min" },
{ "DecimalFormat": { "Precision": 3 }, "Category": "Physiology", "PropertyName": "OxygenSaturation", "Unit": "unitless" },
{ "DecimalFormat": { "Precision": 4 }, "Category": "LiquidCompartment", "CompartmentName": "MyocardiumVasculature", "SubstanceName": "Oxygen", "PropertyName": "PartialPressure", "Unit": "mmHg" },
{ "DecimalFormat": { "Precision": 4 }, "Category": "LiquidCompartment", "CompartmentName": "BrainVasculature", "SubstanceName": "Oxygen", "PropertyName": "PartialPressure", "Unit": "mmHg" },
{ "DecimalFormat": { "Precision": 4 }, "Category": "LiquidCompartment", "CompartmentName": "MyocardiumVasculature", "PropertyName": "InFlow", "Unit": "mL/min" },
{ "DecimalFormat": { "Precision": 4 }, "Category": "LiquidCompartment", "CompartmentName": "BrainVasculature", "PropertyName": "InFlow", "Unit": "mL/min" },
{ "DecimalFormat": { "Precision": 4 }, "Category": "LiquidCompartment", "CompartmentName": "VenaCava", "PropertyName": "InFlow", "Unit": "mL/min" },
{ "DecimalFormat": { "Precision": 4 }, "Category": "LiquidCompartment", "CompartmentName": "RightHeartVasculature", "PropertyName": "InFlow", "Unit": "mL/min" },
{ "DecimalFormat": { "Precision": 4 }, "Category": "LiquidCompartment", "CompartmentName": "MyocardiumVasculature", "SubstanceName": "Oxygen", "PropertyName": "PartialPressure", "Unit": "mmHg" },
{ "DecimalFormat": { "Precision": 4 }, "Category": "LiquidCompartment", "CompartmentName": "BrainVasculature", "SubstanceName": "Oxygen", "PropertyName": "PartialPressure", "Unit": "mmHg" },
{ "DecimalFormat": { "Precision": 4 }, "Category": "LiquidCompartment", "CompartmentName": "MyocardiumVasculature", "PropertyName": "InFlow", "Unit": "mL/min" },
{ "DecimalFormat": { "Precision": 4 }, "Category": "LiquidCompartment", "CompartmentName": "BrainVasculature", "PropertyName": "InFlow", "Unit": "mL/min" },
{ "DecimalFormat": { "Precision": 4 }, "Category": "LiquidCompartment", "CompartmentName": "VenaCava", "PropertyName": "InFlow", "Unit": "mL/min" },
{ "DecimalFormat": { "Precision": 4 }, "Category": "LiquidCompartment", "CompartmentName": "RightHeart", "PropertyName": "InFlow", "Unit": "mL/min" },
{ "DecimalFormat": { "Precision": 3 }, "Category": "Physiology", "PropertyName": "SystemicVascularResistance", "Unit": "mmHg s/mL"},
{ "DecimalFormat": { "Precision": 3 }, "Category": "Physiology", "PropertyName": "TotalHemorrhageRate", "Unit": "mL/s"},
......
data/human/adult/scenarios/patient/HemorrhageGroup3.json
View file @ 161051dd
......@@ -20,13 +20,13 @@
{ "DecimalFormat": { "Precision": 3 }, "Category": "Physiology", "PropertyName": "TidalVolume", "Unit": "mL" },
{ "DecimalFormat": { "Precision": 2 }, "Category": "Physiology", "PropertyName": "RespirationRate", "Unit": "1/min" },
{ "DecimalFormat": { "Precision": 3 }, "Category": "Physiology", "PropertyName": "OxygenSaturation", "Unit": "unitless" },
{ "DecimalFormat": { "Precision": 4 }, "Category": "LiquidCompartment", "CompartmentName": "MyocardiumVasculature", "SubstanceName": "Oxygen", "PropertyName": "PartialPressure", "Unit": "mmHg" },
{ "DecimalFormat": { "Precision": 4 }, "Category": "LiquidCompartment", "CompartmentName": "BrainVasculature", "SubstanceName": "Oxygen", "PropertyName": "PartialPressure", "Unit": "mmHg" },
{ "DecimalFormat": { "Precision": 4 }, "Category": "LiquidCompartment", "CompartmentName": "MyocardiumVasculature", "PropertyName": "InFlow", "Unit": "mL/min" },
{ "DecimalFormat": { "Precision": 4 }, "Category": "LiquidCompartment", "CompartmentName": "BrainVasculature", "PropertyName": "InFlow", "Unit": "mL/min" },
{ "DecimalFormat": { "Precision": 4 }, "Category": "LiquidCompartment", "CompartmentName": "VenaCava", "PropertyName": "InFlow", "Unit": "mL/min" },
{ "DecimalFormat": { "Precision": 4 }, "Category": "LiquidCompartment", "CompartmentName": "RightHeartVasculature", "PropertyName": "InFlow", "Unit": "mL/min" },
{ "DecimalFormat": { "Precision": 4 }, "Category": "LiquidCompartment", "CompartmentName": "MyocardiumVasculature", "SubstanceName": "Oxygen", "PropertyName": "PartialPressure", "Unit": "mmHg" },
{ "DecimalFormat": { "Precision": 4 }, "Category": "LiquidCompartment", "CompartmentName": "BrainVasculature", "SubstanceName": "Oxygen", "PropertyName": "PartialPressure", "Unit": "mmHg" },
{ "DecimalFormat": { "Precision": 4 }, "Category": "LiquidCompartment", "CompartmentName": "MyocardiumVasculature", "PropertyName": "InFlow", "Unit": "mL/min" },
{ "DecimalFormat": { "Precision": 4 }, "Category": "LiquidCompartment", "CompartmentName": "BrainVasculature", "PropertyName": "InFlow", "Unit": "mL/min" },
{ "DecimalFormat": { "Precision": 4 }, "Category": "LiquidCompartment", "CompartmentName": "VenaCava", "PropertyName": "InFlow", "Unit": "mL/min" },
{ "DecimalFormat": { "Precision": 4 }, "Category": "LiquidCompartment", "CompartmentName": "RightHeart", "PropertyName": "InFlow", "Unit": "mL/min" },
{ "DecimalFormat": { "Precision": 3 }, "Category": "Physiology", "PropertyName": "SystemicVascularResistance", "Unit": "mmHg s/mL"},
{ "DecimalFormat": { "Precision": 3 }, "Category": "Physiology", "PropertyName": "TotalHemorrhageRate", "Unit": "mL/s"},
......
data/human/adult/scenarios/patient/HemorrhageGroup4.json
View file @ 161051dd
......@@ -20,13 +20,13 @@
{ "DecimalFormat": { "Precision": 3 }, "Category": "Physiology", "PropertyName": "TidalVolume", "Unit": "mL" },
{ "DecimalFormat": { "Precision": 2 }, "Category": "Physiology", "PropertyName": "RespirationRate", "Unit": "1/min" },
{ "DecimalFormat": { "Precision": 3 }, "Category": "Physiology", "PropertyName": "OxygenSaturation", "Unit": "unitless" },
{ "DecimalFormat": { "Precision": 4 }, "Category": "LiquidCompartment", "CompartmentName": "MyocardiumVasculature", "SubstanceName": "Oxygen", "PropertyName": "PartialPressure", "Unit": "mmHg" },
{ "DecimalFormat": { "Precision": 4 }, "Category": "LiquidCompartment", "CompartmentName": "BrainVasculature", "SubstanceName": "Oxygen", "PropertyName": "PartialPressure", "Unit": "mmHg" },
{ "DecimalFormat": { "Precision": 4 }, "Category": "LiquidCompartment", "CompartmentName": "MyocardiumVasculature", "PropertyName": "InFlow", "Unit": "mL/min" },
{ "DecimalFormat": { "Precision": 4 }, "Category": "LiquidCompartment", "CompartmentName": "BrainVasculature", "PropertyName": "InFlow", "Unit": "mL/min" },
{ "DecimalFormat": { "Precision": 4 }, "Category": "LiquidCompartment", "CompartmentName": "VenaCava", "PropertyName": "InFlow", "Unit": "mL/min" },
{ "DecimalFormat": { "Precision": 4 }, "Category": "LiquidCompartment", "CompartmentName": "RightHeartVasculature", "PropertyName": "InFlow", "Unit": "mL/min" },
{ "DecimalFormat": { "Precision": 4 }, "Category": "LiquidCompartment", "CompartmentName": "MyocardiumVasculature", "SubstanceName": "Oxygen", "PropertyName": "PartialPressure", "Unit": "mmHg" },
{ "DecimalFormat": { "Precision": 4 }, "Category": "LiquidCompartment", "CompartmentName": "BrainVasculature", "SubstanceName": "Oxygen", "PropertyName": "PartialPressure", "Unit": "mmHg" },
{ "DecimalFormat": { "Precision": 4 }, "Category": "LiquidCompartment", "CompartmentName": "MyocardiumVasculature", "PropertyName": "InFlow", "Unit": "mL/min" },
{ "DecimalFormat": { "Precision": 4 }, "Category": "LiquidCompartment", "CompartmentName": "BrainVasculature", "PropertyName": "InFlow", "Unit": "mL/min" },
{ "DecimalFormat": { "Precision": 4 }, "Category": "LiquidCompartment", "CompartmentName": "VenaCava", "PropertyName": "InFlow", "Unit": "mL/min" },
{ "DecimalFormat": { "Precision": 4 }, "Category": "LiquidCompartment", "CompartmentName": "RightHeart", "PropertyName": "InFlow", "Unit": "mL/min" },
{ "DecimalFormat": { "Precision": 3 }, "Category": "Physiology", "PropertyName": "SystemicVascularResistance", "Unit": "mmHg s/mL"},
{ "DecimalFormat": { "Precision": 3 }, "Category": "Physiology", "PropertyName": "TotalHemorrhageRate", "Unit": "mL/s"},
......
data/human/adult/scenarios/patient/HemorrhageGroup5.json
View file @ 161051dd
......@@ -20,13 +20,13 @@
{ "DecimalFormat": { "Precision": 3 }, "Category": "Physiology", "PropertyName": "TidalVolume", "Unit": "mL" },
{ "DecimalFormat": { "Precision": 2 }, "Category": "Physiology", "PropertyName": "RespirationRate", "Unit": "1/min" },
{ "DecimalFormat": { "Precision": 3 }, "Category": "Physiology", "PropertyName": "OxygenSaturation", "Unit": "unitless" },
{ "DecimalFormat": { "Precision": 4 }, "Category": "LiquidCompartment", "CompartmentName": "MyocardiumVasculature", "SubstanceName": "Oxygen", "PropertyName": "PartialPressure", "Unit": "mmHg" },
{ "DecimalFormat": { "Precision": 4 }, "Category": "LiquidCompartment", "CompartmentName": "BrainVasculature", "SubstanceName": "Oxygen", "PropertyName": "PartialPressure", "Unit": "mmHg" },
{ "DecimalFormat": { "Precision": 4 }, "Category": "LiquidCompartment", "CompartmentName": "MyocardiumVasculature", "PropertyName": "InFlow", "Unit": "mL/min" },
{ "DecimalFormat": { "Precision": 4 }, "Category": "LiquidCompartment", "CompartmentName": "BrainVasculature", "PropertyName": "InFlow", "Unit": "mL/min" },
{ "DecimalFormat": { "Precision": 4 }, "Category": "LiquidCompartment", "CompartmentName": "VenaCava", "PropertyName": "InFlow", "Unit": "mL/min" },
{ "DecimalFormat": { "Precision": 4 }, "Category": "LiquidCompartment", "CompartmentName": "RightHeartVasculature", "PropertyName": "InFlow", "Unit": "mL/min" },
{ "DecimalFormat": { "Precision": 4 }, "Category": "LiquidCompartment", "CompartmentName": "MyocardiumVasculature", "SubstanceName": "Oxygen", "PropertyName": "PartialPressure", "Unit": "mmHg" },
{ "DecimalFormat": { "Precision": 4 }, "Category": "LiquidCompartment", "CompartmentName": "BrainVasculature", "SubstanceName": "Oxygen", "PropertyName": "PartialPressure", "Unit": "mmHg" },
{ "DecimalFormat": { "Precision": 4 }, "Category": "LiquidCompartment", "CompartmentName": "MyocardiumVasculature", "PropertyName": "InFlow", "Unit": "mL/min" },
{ "DecimalFormat": { "Precision": 4 }, "Category": "LiquidCompartment", "CompartmentName": "BrainVasculature", "PropertyName": "InFlow", "Unit": "mL/min" },
{ "DecimalFormat": { "Precision": 4 }, "Category": "LiquidCompartment", "CompartmentName": "VenaCava", "PropertyName": "InFlow", "Unit": "mL/min" },
{ "DecimalFormat": { "Precision": 4 }, "Category": "LiquidCompartment", "CompartmentName": "RightHeart", "PropertyName": "InFlow", "Unit": "mL/min" },
{ "DecimalFormat": { "Precision": 3 }, "Category": "Physiology", "PropertyName": "SystemicVascularResistance", "Unit": "mmHg s/mL"},
{ "DecimalFormat": { "Precision": 3 }, "Category": "Physiology", "PropertyName": "TotalHemorrhageRate", "Unit": "mL/s"},
......
data/human/adult/scenarios/patient/HemorrhageGroup6.json
View file @ 161051dd
......@@ -21,12 +21,12 @@
{ "DecimalFormat": { "Precision": 2 }, "Category": "Physiology", "PropertyName": "RespirationRate", "Unit": "1/min" },
{ "DecimalFormat": { "Precision": 3 }, "Category": "Physiology", "PropertyName": "OxygenSaturation", "Unit": "unitless" },
{ "DecimalFormat": { "Precision": 4 }, "Category": "LiquidCompartment", "CompartmentName": "MyocardiumVasculature", "SubstanceName": "Oxygen", "PropertyName": "PartialPressure", "Unit": "mmHg" },
{ "DecimalFormat": { "Precision": 4 }, "Category": "LiquidCompartment", "CompartmentName": "BrainVasculature", "SubstanceName": "Oxygen", "PropertyName": "PartialPressure", "Unit": "mmHg" },
{ "DecimalFormat": { "Precision": 4 }, "Category": "LiquidCompartment", "CompartmentName": "MyocardiumVasculature", "PropertyName": "InFlow", "Unit": "mL/min" },
{ "DecimalFormat": { "Precision": 4 }, "Category": "LiquidCompartment", "CompartmentName": "BrainVasculature", "PropertyName": "InFlow", "Unit": "mL/min" },
{ "DecimalFormat": { "Precision": 4 }, "Category": "LiquidCompartment", "CompartmentName": "VenaCava", "PropertyName": "InFlow", "Unit": "mL/min" },
{ "DecimalFormat": { "Precision": 4 }, "Category": "LiquidCompartment", "CompartmentName": "RightHeartVasculature", "PropertyName": "InFlow", "Unit": "mL/min" },
{ "DecimalFormat": { "Precision": 4 }, "Category": "LiquidCompartment", "CompartmentName": "MyocardiumVasculature", "SubstanceName": "Oxygen", "PropertyName": "PartialPressure", "Unit": "mmHg" },
{ "DecimalFormat": { "Precision": 4 }, "Category": "LiquidCompartment", "CompartmentName": "BrainVasculature", "SubstanceName": "Oxygen", "PropertyName": "PartialPressure", "Unit": "mmHg" },
{ "DecimalFormat": { "Precision": 4 }, "Category": "LiquidCompartment", "CompartmentName": "MyocardiumVasculature", "PropertyName": "InFlow", "Unit": "mL/min" },
{ "DecimalFormat": { "Precision": 4 }, "Category": "LiquidCompartment", "CompartmentName": "BrainVasculature", "PropertyName": "InFlow", "Unit": "mL/min" },
{ "DecimalFormat": { "Precision": 4 }, "Category": "LiquidCompartment", "CompartmentName": "VenaCava", "PropertyName": "InFlow", "Unit": "mL/min" },
{ "DecimalFormat": { "Precision": 4 }, "Category": "LiquidCompartment", "CompartmentName": "RightHeart", "PropertyName": "InFlow", "Unit": "mL/min" },
{ "DecimalFormat": { "Precision": 3 }, "Category": "Physiology", "PropertyName": "SystemicVascularResistance", "Unit": "mmHg s/mL"},
{ "DecimalFormat": { "Precision": 3 }, "Category": "Physiology", "PropertyName": "TotalHemorrhageRate", "Unit": "mL/s"},
......
src/cpp/cdm/engine/SEEquipmentActionCollection.cpp
View file @ 161051dd
......@@ -249,7 +249,7 @@ bool SEEquipmentActionCollection::ProcessAction(const SEEquipmentAction& action)
bool SEEquipmentActionCollection::HasAnesthesiaMachineConfiguration() const
{
return m_AnesthesiaMachineConfiguration == nullptr ? false : true;
return m_AnesthesiaMachineConfiguration == nullptr ? false : m_AnesthesiaMachineConfiguration->IsActive();
}
SEAnesthesiaMachineConfiguration& SEEquipmentActionCollection::GetAnesthesiaMachineConfiguration()
{
......@@ -509,7 +509,7 @@ void SEEquipmentActionCollection::RemoveAnesthesiaMachineYPieceDisconnect()
bool SEEquipmentActionCollection::HasInhalerConfiguration() const
{
return m_InhalerConfiguration == nullptr ? false : true;
return m_InhalerConfiguration == nullptr ? false : m_InhalerConfiguration->IsActive();
}
SEInhalerConfiguration& SEEquipmentActionCollection::GetInhalerConfiguration()
{
......@@ -529,7 +529,7 @@ void SEEquipmentActionCollection::RemoveInhalerConfiguration()
bool SEEquipmentActionCollection::HasMechanicalVentilatorConfiguration() const
{
return m_MechanicalVentilatorConfiguration == nullptr ? false : true;
return m_MechanicalVentilatorConfiguration == nullptr ? false : m_MechanicalVentilatorConfiguration->IsActive();
}
SEMechanicalVentilatorConfiguration& SEEquipmentActionCollection::GetMechanicalVentilatorConfiguration()
{
......
src/cpp/cdm/patient/actions/SEHemorrhage.cpp
View file @ 161051dd
......@@ -64,9 +64,9 @@ bool SEHemorrhage::IsActive() const
{
if (!SEPatientAction::IsActive())
return false;
if (HasSeverity() && m_Severity->IsPositive())
if (HasSeverity())
return true;
if (HasFlowRate() && m_FlowRate->IsPositive())
if (HasFlowRate())
return true;
return false;
}
......
src/cpp/cdm/patient/actions/SESubstanceBolus.cpp
View file @ 161051dd
......@@ -13,6 +13,7 @@ SESubstanceBolus::SESubstanceBolus(const SESubstance& substance, Logger* logger)
{
m_AdminRoute=eSubstanceAdministration_Route::Intravenous;
m_AdminDuration=nullptr;
m_AdministeredDose = nullptr;
m_Dose=nullptr;
m_Concentration=nullptr;
}
......@@ -21,6 +22,7 @@ SESubstanceBolus::~SESubstanceBolus()
{
m_AdminRoute = eSubstanceAdministration_Route::Intravenous;
SAFE_DELETE(m_AdminDuration);
SAFE_DELETE(m_AdministeredDose);
SAFE_DELETE(m_Dose);
SAFE_DELETE(m_Concentration);
}
......@@ -30,6 +32,7 @@ void SESubstanceBolus::Clear()
SEPatientAction::Clear();
m_AdminRoute=eSubstanceAdministration_Route::Intravenous;
INVALIDATE_PROPERTY(m_AdminDuration);
INVALIDATE_PROPERTY(m_AdministeredDose);
INVALIDATE_PROPERTY(m_Dose);
INVALIDATE_PROPERTY(m_Concentration);
}
......@@ -48,7 +51,14 @@ bool SESubstanceBolus::IsValid() const
bool SESubstanceBolus::IsActive() const
{
return !SEPatientAction::IsActive();
if (!SEPatientAction::IsActive())
return false;
return !m_Dose->IsZero() && !m_Concentration->IsZero();
}
void SESubstanceBolus::Activate()
{
SEPatientAction::Activate();
GetAdministeredDose().SetValue(0, VolumeUnit::mL);
}
void SESubstanceBolus::Deactivate()
{
......@@ -60,6 +70,8 @@ const SEScalar* SESubstanceBolus::GetScalar(const std::string& name)
{
if (name.compare("AdminDuration") == 0)
return &GetAdminDuration();
if (name.compare("AdministeredDose") == 0)
return &GetAdministeredDose();
if (name.compare("Dose") == 0)
return &GetDose();
if (name.compare("Concentration") == 0)
......@@ -93,6 +105,23 @@ double SESubstanceBolus::GetAdminDuration(const TimeUnit& unit) const
return m_AdminDuration->GetValue(unit);
}
bool SESubstanceBolus::HasAdministeredDose() const
{
return m_AdministeredDose == nullptr ? false : m_AdministeredDose->IsValid();
}
SEScalarVolume& SESubstanceBolus::GetAdministeredDose()
{
if (m_AdministeredDose == nullptr)
m_AdministeredDose = new SEScalarVolume();
return *m_AdministeredDose;
}
double SESubstanceBolus::GetAdministeredDose(const VolumeUnit& unit) const
{
if (m_AdministeredDose == nullptr)
return SEScalar::dNaN();
return m_AdministeredDose->GetValue(unit);
}
bool SESubstanceBolus::HasDose() const
{
return m_Dose==nullptr?false:m_Dose->IsValid();
......@@ -146,5 +175,6 @@ void SESubstanceBolus::ToString(std::ostream &str) const
str << "\n\tAdministration Duration: "; HasAdminDuration() ? str << *m_AdminDuration : str << "No Administration Duration Set";
str << "\n\tDose: "; HasDose()? str << *m_Dose : str << "No Dose Set";
str << "\n\tConcentration: "; HasConcentration()? str << *m_Concentration : str << "NaN";
str << "\n\AdministeredDose: "; HasAdministeredDose() ? str << *m_AdministeredDose : str << "NaN";
str << std::flush;
}
src/cpp/cdm/patient/actions/SESubstanceBolus.h
View file @ 161051dd
......@@ -18,6 +18,7 @@ public:
virtual bool IsValid() const;
virtual bool IsActive() const;
virtual void Activate();
virtual void Deactivate();
virtual eSubstanceAdministration_Route GetAdminRoute() const;
......@@ -42,10 +43,16 @@ public:
virtual const SEScalar* GetScalar(const std::string& name);
virtual bool HasAdministeredDose() const;
virtual SEScalarVolume& GetAdministeredDose();
virtual double GetAdministeredDose(const VolumeUnit& unit) const;
protected:
const SESubstance& m_Substance;
eSubstanceAdministration_Route m_AdminRoute;
SEScalarTime* m_AdminDuration;
SEScalarVolume* m_AdministeredDose;
SEScalarMassPerVolume* m_Concentration;
SEScalarVolume* m_Dose;
};
src/cpp/cpm/physiology/Cardiovascular.cpp
View file @ 161051dd
......@@ -993,6 +993,7 @@ void Cardiovascular::Hemorrhage()
bool completeStateChange = false;
double TotalLossRate_mL_Per_s = 0.0;
std::vector<SEHemorrhage*> zero_hemorrhages;
std::vector<SEHemorrhage*> invalid_hemorrhages;
const std::vector<SEHemorrhage*>& hems = m_data.GetActions().GetPatientActions().GetHemorrhages();
//Loop over all hemorrhages to check for validity
......@@ -1270,18 +1271,23 @@ void Cardiovascular::Hemorrhage()
}
}
// Keep track of bleeding on the action
double hemorrhagePathFlow_mL_Per_s = 0;
if (hemorrhagePath->HasNextFlow())
hemorrhagePathFlow_mL_Per_s = hemorrhagePath->GetNextFlow().GetValue(VolumePerTimeUnit::mL_Per_s);
double hemorrhagePathFlow_mL_Per_s;
if (h->HasSeverity())
{
hemorrhagePathFlow_mL_Per_s = hemorrhagePath->GetNextFlow().GetValue(VolumePerTimeUnit::mL_Per_s);
h->GetFlowRate().SetValue(hemorrhagePathFlow_mL_Per_s, VolumePerTimeUnit::mL_Per_s);
}
if (!h->GetFlowRate().IsPositive())
zero_hemorrhages.push_back(h);
hemorrhagePathFlow_mL_Per_s = h->GetFlowRate(VolumePerTimeUnit::mL_Per_s);
h->GetTotalBloodLost().IncrementValue(hemorrhagePathFlow_mL_Per_s* m_dT_s, VolumeUnit::mL);
}
}
// Remove any invalid hemorrhages
// Remove any zero hemorrhages
for (SEHemorrhage* ih : zero_hemorrhages)
m_data.GetActions().GetPatientActions().RemoveHemorrhage(ih->GetCompartment());
// Destroy any invalid hemorrhages
for (SEHemorrhage* ih : invalid_hemorrhages)
m_data.GetActions().GetPatientActions().RemoveHemorrhage(ih->GetCompartment());
......
src/cpp/cpm/physiology/Drugs.cpp
View file @ 161051dd
......@@ -196,7 +196,6 @@ void Drugs::AdministerSubstanceBolus()
double dose_mL;
double concentration_ugPermL;
double massIncrement_ug = 0;
double volumeDecrement_mL = 0;
double administrationTime_s;
for (auto bolus : boluses)
......@@ -204,8 +203,8 @@ void Drugs::AdministerSubstanceBolus()
if (!bolus->IsActive())
continue;
dose_mL = bolus->GetDose().GetValue(VolumeUnit::mL);
if (dose_mL<=0)
dose_mL = bolus->GetDose(VolumeUnit::mL);
if (bolus->GetAdministeredDose().GetValue(VolumeUnit::mL) >= dose_mL)
{
// Finished, remove it
completedBolus.push_back(&bolus->GetSubstance());
......@@ -238,14 +237,10 @@ void Drugs::AdministerSubstanceBolus()
}
administrationTime_s = bolus->GetAdminDuration(TimeUnit::s);
concentration_ugPermL = bolus->GetConcentration(MassPerVolumeUnit::ug_Per_mL);
massIncrement_ug = dose_mL*concentration_ugPermL*m_dt_s / administrationTime_s;
volumeDecrement_mL = -massIncrement_ug / concentration_ugPermL;
massIncrement_ug = dose_mL * concentration_ugPermL * m_dt_s / administrationTime_s;
subQ->GetMass().IncrementValue(massIncrement_ug, MassUnit::ug);
subQ->Balance(BalanceLiquidBy::Mass);
if (volumeDecrement_mL < 0)
volumeDecrement_mL = 0;
bolus->GetDose().IncrementValue(volumeDecrement_mL,VolumeUnit::mL);
bolus->GetAdministeredDose().IncrementValue(massIncrement_ug / concentration_ugPermL, VolumeUnit::mL);
/// \todo Add fluid amount to fluid system
}
// Remove any bolus that are complete
......
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