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vtkExodusIIReaderPrivate is now used by IO/ParallelExodus so on
windows the correct export statment is required.

Change-Id: I8e9ceccce96e9eef8c4f2f4d510d707048b113ff

vtkExodusIIReaderPrivate uses VTK_USE_PARALLEL to conditionally compile
Parallel specific methods. These should be moved to vtkPExodusIIReader.

Change-Id: Ib70655fcda3cc39f63a568cb021a57080dd863b5

Add a comment to the bottom of each header that used to be excluded from
kit HeaderTesting tests in monolithic VTK.  Format the comment in a way
that cannot be accidentally copied into another header without
modification.  This comment will tell HeaderTesting.py to exclude a
header from testing so we do not have to separately list every excluded
header in every module.

Change-Id: I9d7ae607125459a6527843c8c15ac463a20f6812

VTK Developers authored Apr 09, 2012 and Brad King committed Apr 09, 2012

Exclude ThirdParty, Utilities/MetaIO, and Utilities/KWSys as these
are maintained outside VTK.

Co-Author: Marcus D. Hanwell <marcus.hanwell@kitware.com>
Co-Author: Chris Harris <chris.harris@kitware.com>
Co-Author: Brad King <brad.king@kitware.com>

VTK Developers authored Apr 09, 2012 and Brad King committed Apr 09, 2012

Add module.cmake, CMakeLists.txt, and other build system files.

The modular VTK build system is not yet mature.  The monolithic build
files had a lot of infrastructure.  The modular build files reproduce
much of the functionality but some features will need to be restored
later.  Document status and tasks in "TODO-Modularization.txt".

Co-Author: Marcus D. Hanwell <marcus.hanwell@kitware.com>
Co-Author: Chris Harris <chris.harris@kitware.com>
Co-Author: Brad King <brad.king@kitware.com>
Co-Author: Nikhil Shetty <nikhil.shetty@kitware.com>

VTK Developers authored Apr 09, 2012 and Brad King committed Apr 09, 2012

Move source files from their former monolithic VTK location to their new
location in modular VTK without modification.  This preserves enough
information for "git blame -M" and "git log --follow" to connect
modularized VTK files to their original location and history.

Co-Author: Marcus D. Hanwell <marcus.hanwell@kitware.com>
Co-Author: Chris Harris <chris.harris@kitware.com>
Co-Author: Brad King <brad.king@kitware.com>
Co-Author: Nikhil Shetty <nikhil.shetty@kitware.com>

This fixes a number of misspellings in the comments of
the source files in VTK/Hybrid. The misspellings were
found using the codespell tool.

Change-Id: Ie3373ec30aa86642889dc1f50077b2fba20f0e75

The vtkstd forwarding headers are deprecated, move to using the STL
headers directly.

Change-Id: Iaeb5ea0c10d40b8e934b6a8ca18f28c3b022b924

Change-Id: I6cb9ee506ced0354ae82124fea1af4a9ebfb20d4

Patricia Crossno authored Jul 20, 2011 and Kenneth Moreland committed Jul 20, 2011

Change-Id: I62f74276ca5a14faf4af1891fb248553975959e3

This work brifely began 4 years ago but was never continued nor used.
It is best to remove these leftover appendices.

This work brifely began 4 years ago but was never continued nor used.
It is best to remove these leftover appendices.

Cleans up classes that still were not properly parsed by the improved doc_header2doxygen.pl script. Some classes are still missing brief descriptions.

Change-Id: I9f7ee19b6e550d8379e7a40733a76749827a1c3d

Needed a custom copy constructor so that the connectivity cache in
the ExodusIIReader doesn't reset when the cached is valid.

When stl reserves on a vector with existing objects, it doesn't promise it won't delete and than copy existing objects. This makes sure if that happens we delete the old cached geometery so it doesn't leak.

Create Utilities/vtk_exodusII.h to include exodusII.h from our internal
fork of ExodusII at Utilities/vtkexodus2/include.  Avoid putting the
internal location directly in the header file search path so that the
headers do not conflict with any on the system.  This approach is
already used for several other utility library headers.

Kenneth Moreland authored Jul 01, 2010 and Utkarsh Ayachit committed Jul 14, 2010

There were multiple instances where the executive called ProcessEvents
on the Exodus reader and the reader updated its own MTime.  This
causes problems with the executive's update mechanism and under
certain circumstances even caused a deadlock in ParaView.

Mark Olesen authored May 19, 2010 and Brad King committed May 20, 2010

The CVS $Revision$ keyword replacement will no longer maintain these
macros automatically.  They were used only to implement CollectRevisions
and vtkObjectBase::PrintRevisions, an API that was never used.

Automated as follows:

  pass 0:
  catch templates
  ---------------
  $ git grep 'vtk\(Cxx\|Type\)RevisionMacro' | grep '<'

  pass 1:
  main changes
  ---------------
  $ git grep -l '^vtkCxxRevisionMacro' | while read file; do
    echo "$file" 1>&2
    perl -i -ne 'print unless (/^vtkCxxRevisionMacro/ and /\)/)' $file
  done
  $ git grep -l -e 'vtkTypeRevisionMacro(' | while read file; do
    echo "$file" 1>&2
    perl -i -pe 's/vtkTypeRevisionMacro/vtkTypeMacro/g' $file
  done

  pass 2:
  verify
  ---------------
  $ git grep 'vtk\(Cxx\|Type\)RevisionMacro'

Fixed multi-line vtkCxxRevisionMacro and templates by hand.

Mark Olesen authored Apr 23, 2010 and Brad King committed Apr 23, 2010

The CVS $Revision$ keyword replacement will no longer maintain these
macros automatically.  They were used only to implement CollectRevisions
and vtkObjectBase::PrintRevisions, an API that was never used.

Automated as follows:

  pass 0:
  catch templates
  ---------------
  $ git grep 'vtk\(Cxx\|Type\)RevisionMacro' | grep '<'

  pass 1:
  main changes
  ---------------
  $ git grep -l '^vtkCxxRevisionMacro' | while read file; do
    echo "$file" 1>&2
    perl -i -ne 'print unless (/^vtkCxxRevisionMacro/ and /\)/)' $file
  done
  $ git grep -l -e 'vtkTypeRevisionMacro(' | while read file; do
    echo "$file" 1>&2
    perl -i -pe 's/vtkTypeRevisionMacro/vtkTypeMacro/g' $file
  done

  pass 2:
  verify
  ---------------
  $ git grep 'vtk\(Cxx\|Type\)RevisionMacro'

Fixed multi-line vtkCxxRevisionMacro and templates by hand.

* Added implicit index arrays as requested in 8422.  It is off by default
as there are currently a number of caveats to what numbers will show up
there.
* XML changes to load implicit exodus arrays.
* Added the implicit variables to the exodus variable box, off by default.

ENH: Added implicit index arrays as requested in 8422.  It is off by default as there are currently a number of caveats to what numbers will show up there.

The issue was that vtkPExodusIIReader appends the outputs of internal readers
for each of the file into a single multi-block. However, when doing this
appending, the field data from the 1st reader alone would get propagated.
However when FastPathId was present on some other file, the field data would be
lost. Fixed that by making vtkPExtractArraysOverTime check which reader found
the requested fast id and explicitly pass the fast-path data arrays.

exodus reader switched to multiblocks and vtkExtractArraysOverTime started
support extracting of multiple cells/points.

In the new framework, fast path only works if the selection being extracted is a
global id based selection. For multiple cells/points, we execute the pipeline
once for each cell/point, thus avoiding any need to change the fast path-based
keys in the executive.

vtkCompositeDataPipeline::NeedToExecuteData() now takes into consideration
changes in fast path keys (similar to vtkStreamingDemandDrivenPipeline).

documentation available at:
http://paraview.org/ParaView3/index.php/Block_Hierarchy_Meta_Data

vtkExodusIIReader now produces the SIL for the blocks/assemblies/materials
hierarchy. The pqExodusIIPanel uses this SIL to show the appropriate controls on
the GUI.

This adds a bunch of new classes such as pqSILModel, pqSignalAdaptorSILModel,
pqProxySILModel etc. which assist is showing the SIL on the GUI panel.

     other test failures.

COMP: Fix problem with Java wrappers by getting rid of
      Broadcast method on vtkExodusIIReader (it's all part of
      vtkPExodusIIReader::Broadcast now that the parallel
      reader has access to the metadata object).
BUG: Fix test failures when loading fewer Exodus files than
     there are processes. (Forgot to update SetUpEmptyGrid. Now
     it is part of the private metadata class and the
     vtkExodusIIReaderPrivate declaration has its own header file.)
ENH: Add support for FileId array