/*******************************************************************************
 * This file is part of SWIFT.
 * Copyright (c) 2018 Matthieu Schaller (matthieu.schaller@durham.ac.uk)
 *
 * This program is free software: you can redistribute it and/or modify
 * it under the terms of the GNU Lesser General Public License as published
 * by the Free Software Foundation, either version 3 of the License, or
 * (at your option) any later version.
 *
 * This program is distributed in the hope that it will be useful,
 * but WITHOUT ANY WARRANTY; without even the implied warranty of
 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
 * GNU General Public License for more details.
 *
 * You should have received a copy of the GNU Lesser General Public License
 * along with this program.  If not, see <http://www.gnu.org/licenses/>.
 *
 ******************************************************************************/
#ifndef SWIFT_COOLING_COMPTON_H
#define SWIFT_COOLING_COMPTON_H

/**
 * @file src/cooling/Compton/cooling.h
 * @brief Routines related to the "Compton" cooling function.
 *
 * This model compute the cooling rate from the Compton interaction with
 * the CMB photons.
 */

/* Config parameters. */
#include "../config.h"

/* Some standard headers. */
#include <float.h>
#include <math.h>

/* Local includes. */
#include "cooling_properties.h"
#include "entropy_floor.h"
#include "error.h"
#include "hydro.h"
#include "parser.h"
#include "part.h"
#include "physical_constants.h"
#include "units.h"

/**
 * @brief Common operations performed on the cooling function at a
 * given time-step or redshift.
 *
 * @param cosmo The current cosmological model.
 * @param cooling The #cooling_function_data used in the run.
 * @param s The #space containing all the particles.
 */
INLINE static void cooling_update(const struct cosmology* cosmo,
                                  struct cooling_function_data* cooling,
                                  struct space* s) {
  // Add content if required.
}

/**
 * @brief Calculates du/dt in CGS units for a particle.
 *
 * @param cosmo The current cosmological model.
 * @param phys_const The physical constants in internal units.
 * @param hydro_props The properties of the hydro scheme.
 * @param cooling The #cooling_function_data used in the run.
 * @param z The current redshift.
 * @param u The current internal energy in internal units.
 * @param p Pointer to the particle data.
 * @return The change in energy per unit mass due to cooling for this particle
 * in cgs units [erg * g^-1 * s^-1].
 */
__attribute__((always_inline)) INLINE static double Compton_cooling_rate_cgs(
    const struct cosmology* cosmo, const struct phys_const* restrict phys_const,
    const struct hydro_props* hydro_props,
    const struct cooling_function_data* cooling, const double z, const double u,
    const struct part* p) {

  /* Get particle density */
  const double rho = hydro_get_physical_density(p, cosmo);
  const double rho_cgs = rho * cooling->conv_factor_density_to_cgs;

  /* Powers of (1 + z) */
  const double zp1 = z + 1.;
  const double zp1p2 = zp1 * zp1;
  const double zp1p4 = zp1p2 * zp1p2; /* (1 + z)^4 */

  /* CMB temperature at this redshift */
  const double T_CMB = cooling->const_T_CMB_0 * zp1;

  /* Physical constants */
  const double m_H = phys_const->const_proton_mass;
  const double k_B = phys_const->const_boltzmann_k;

  /* Gas properties */
  const double T_transition = hydro_props->hydrogen_ionization_temperature;
  const double mu_neutral = hydro_props->mu_neutral;
  const double mu_ionised = hydro_props->mu_ionised;

  /* Temperature over mean molecular weight */
  const double T_over_mu = hydro_gamma_minus_one * u * m_H / k_B;

  double T;

  /* Are we above or below the HII -> HI transition? */
  if (T_over_mu > (T_transition + 1.) / mu_ionised)
    T = T_over_mu * mu_ionised;
  else if (T_over_mu < (T_transition - 1.) / mu_neutral)
    T = T_over_mu * mu_neutral;
  else
    T = T_transition;

  /* Electron abundance */
  double electron_abundance = 0.;  // MATTHIEU: To do: compute X_e

  /* Temperature difference with the CMB */
  const double delta_T = T - T_CMB;

  /* Electron density */
  const double electron_density_cgs =
      rho_cgs * electron_abundance * cooling->proton_mass_cgs_inv;

  /* Compton formula */
  return cooling->const_Compton_rate_cgs * delta_T * zp1p4 *
         electron_density_cgs / rho_cgs;
}

/**
 * @brief Apply the cooling function to a particle.
 *
 * @param phys_const The physical constants in internal units.
 * @param us The internal system of units.
 * @param cosmo The current cosmological model.
 * @param hydro_props The properties of the hydro scheme.
 * @param floor_props Properties of the entropy floor.
 * @param cooling The #cooling_function_data used in the run.
 * @param p Pointer to the particle data.
 * @param xp Pointer to the particle' extended data.
 * @param dt The time-step of this particle.
 * @param dt_therm The time-step operator used for thermal quantities.
 * @param time Time since Big Bang (or start of the simulation) in internal
 * units.
 */
__attribute__((always_inline)) INLINE static void cooling_cool_part(
    const struct phys_const* restrict phys_const,
    const struct unit_system* restrict us,
    const struct cosmology* restrict cosmo,
    const struct hydro_props* hydro_props,
    const struct entropy_floor_properties* floor_props,
    const struct cooling_function_data* restrict cooling,
    struct part* restrict p, struct xpart* restrict xp, const float dt,
    const float dt_therm, const double time) {

  /* Nothing to do here? */
  if (dt == 0.) return;

  /* Current energy */
  const float u_old = hydro_get_physical_internal_energy(p, xp, cosmo);

  /* Current du_dt in physical coordinates (internal units) */
  const float hydro_du_dt = hydro_get_physical_internal_energy_dt(p, cosmo);

  /* Calculate cooling du_dt (in cgs units) */
  const double cooling_du_dt_cgs = Compton_cooling_rate_cgs(
      cosmo, phys_const, hydro_props, cooling, cosmo->z, u_old, p);

  /* Convert to internal units */
  float cooling_du_dt =
      cooling_du_dt_cgs * cooling->conv_factor_energy_rate_from_cgs;

  /* Add cosmological term */
  cooling_du_dt *= cosmo->a * cosmo->a;

  float total_du_dt = hydro_du_dt + cooling_du_dt;

  /* We now need to check that we are not going to go below any of the limits */

  /* Limit imposed by the entropy floor */
  const float A_floor = entropy_floor(p, cosmo, floor_props);
  const float rho = hydro_get_physical_density(p, cosmo);
  const float u_floor = gas_internal_energy_from_entropy(rho, A_floor);

  /* Absolute minimum */
  const float u_minimal = hydro_props->minimal_internal_energy;

  /* Largest of both limits */
  const float u_limit = max(u_minimal, u_floor);

  /* First, check whether we may end up below the minimal energy after
   * this step 1/2 kick + another 1/2 kick that could potentially be for
   * a time-step twice as big. We hence check for 1.5 delta_t. */
  if (u_old + total_du_dt * 1.5 * dt_therm < u_limit) {
    total_du_dt = (u_limit - u_old) / (1.5f * dt_therm);
  }

  /* Second, check whether the energy used in the prediction could get negative.
   * We need to check for the 1/2 dt kick followed by a full time-step drift
   * that could potentially be for a time-step twice as big. We hence check
   * for 2.5 delta_t but this time against 0 energy not the minimum */
  if (u_old + total_du_dt * 2.5 * dt_therm < 0.) {
    total_du_dt = -u_old / ((2.5f + 0.0001f) * dt_therm);
  }

  /* Update the internal energy time derivative */
  hydro_set_physical_internal_energy_dt(p, cosmo, total_du_dt);

  /* Store the radiated energy (assuming dt will not change) */
  xp->cooling_data.radiated_energy +=
      -hydro_get_mass(p) * (total_du_dt - hydro_du_dt) * dt_therm;
}

/**
 * @brief Computes the time-step due to cooling for this particle.
 *
 * We impose no time-step limit.
 *
 * @param cooling The #cooling_function_data used in the run.
 * @param phys_const The physical constants in internal units.
 * @param cosmo The current cosmological model.
 * @param hydro_props The properties of the hydro scheme.
 * @param us The internal system of units.
 * @param p Pointer to the particle data.
 * @param xp Pointer to the extended data of the particle.
 */
__attribute__((always_inline)) INLINE static float cooling_timestep(
    const struct cooling_function_data* restrict cooling,
    const struct phys_const* restrict phys_const,
    const struct cosmology* restrict cosmo,
    const struct unit_system* restrict us,
    const struct hydro_props* hydro_props, const struct part* restrict p,
    const struct xpart* restrict xp) {

  return FLT_MAX;
}

/**
 * @brief Sets the cooling properties of the (x-)particles to a valid start
 * state.
 *
 * Nothing to do here. Just set the radiated energy counter to 0.
 *
 * @param phys_const The physical constants in internal units.
 * @param cooling The properties of the cooling function.
 * @param us The internal system of units.
 * @param hydro_props The properties of the hydro scheme.
 * @param cosmo The current cosmological model.
 * @param p Pointer to the particle data.
 * @param xp Pointer to the extended particle data.
 */
__attribute__((always_inline)) INLINE static void cooling_first_init_part(
    const struct phys_const* restrict phys_const,
    const struct unit_system* restrict us,
    const struct hydro_props* hydro_props,
    const struct cosmology* restrict cosmo,
    const struct cooling_function_data* restrict cooling,
    const struct part* restrict p, struct xpart* restrict xp) {

  xp->cooling_data.radiated_energy = 0.f;
}

/**
 * @brief Compute the temperature of a #part based on the cooling function.
 *
 * @param phys_const #phys_const data structure.
 * @param hydro_props The properties of the hydro scheme.
 * @param us The internal system of units.
 * @param cosmo #cosmology data structure.
 * @param cooling #cooling_function_data struct.
 * @param p #part data.
 * @param xp Pointer to the #xpart data.
 */
INLINE static float cooling_get_temperature(
    const struct phys_const* restrict phys_const,
    const struct hydro_props* restrict hydro_props,
    const struct unit_system* restrict us,
    const struct cosmology* restrict cosmo,
    const struct cooling_function_data* restrict cooling,
    const struct part* restrict p, const struct xpart* restrict xp) {

  /* Physical constants */
  const double m_H = phys_const->const_proton_mass;
  const double k_B = phys_const->const_boltzmann_k;

  /* Gas properties */
  const double T_transition = hydro_props->hydrogen_ionization_temperature;
  const double mu_neutral = hydro_props->mu_neutral;
  const double mu_ionised = hydro_props->mu_ionised;

  /* Particle temperature */
  const double u = hydro_get_physical_internal_energy(p, xp, cosmo);

  /* Temperature over mean molecular weight */
  const double T_over_mu = hydro_gamma_minus_one * u * m_H / k_B;

  /* Are we above or below the HII -> HI transition? */
  if (T_over_mu > (T_transition + 1.) / mu_ionised)
    return T_over_mu * mu_ionised;
  else if (T_over_mu < (T_transition - 1.) / mu_neutral)
    return T_over_mu * mu_neutral;
  else
    return T_transition;
}

/**
 * @brief Returns the total radiated energy by this particle.
 *
 * @param xp The extended particle data
 */
__attribute__((always_inline)) INLINE static float cooling_get_radiated_energy(
    const struct xpart* restrict xp) {

  return xp->cooling_data.radiated_energy;
}

/**
 * @brief Split the coolong content of a particle into n pieces
 *
 * @param p The #part.
 * @param xp The #xpart.
 * @param n The number of pieces to split into.
 */
static INLINE void cooling_split_part(struct part* p, struct xpart* xp,
                                      double n) {

  xp->cooling_data.radiated_energy /= n;
}

/**
 * @brief Initialises the cooling properties.
 *
 * @param parameter_file The parsed parameter file.
 * @param us The current internal system of units.
 * @param phys_const The physical constants in internal units.
 * @param hydro_props The properties of the hydro scheme.
 * @param cooling The cooling properties to initialize
 */
static INLINE void cooling_init_backend(struct swift_params* parameter_file,
                                        const struct unit_system* us,
                                        const struct phys_const* phys_const,
                                        const struct hydro_props* hydro_props,
                                        struct cooling_function_data* cooling) {

  /* Some useful conversion values */
  cooling->conv_factor_density_to_cgs =
      units_cgs_conversion_factor(us, UNIT_CONV_DENSITY);
  cooling->conv_factor_energy_to_cgs =
      units_cgs_conversion_factor(us, UNIT_CONV_ENERGY_PER_UNIT_MASS);
  cooling->conv_factor_energy_rate_from_cgs =
      units_cgs_conversion_factor(us, UNIT_CONV_TIME) /
      units_cgs_conversion_factor(us, UNIT_CONV_ENERGY_PER_UNIT_MASS);

  /* Useful constants */
  cooling->proton_mass_cgs_inv =
      1. / (phys_const->const_proton_mass *
            units_cgs_conversion_factor(us, UNIT_CONV_MASS));

  /* Temperature of the CMB in CGS */
  const double T_CMB_0 = phys_const->const_T_CMB_0 *
                         units_cgs_conversion_factor(us, UNIT_CONV_TEMPERATURE);
  cooling->const_T_CMB_0 = T_CMB_0; /* [K] */

  /* Compute the coefficient at the front of the Compton cooling expression */
  const double radiation_constant =
      4. * phys_const->const_stefan_boltzmann / phys_const->const_speed_light_c;
  const double compton_coefficient =
      4. * radiation_constant * phys_const->const_thomson_cross_section *
      phys_const->const_boltzmann_k /
      (phys_const->const_electron_mass * phys_const->const_speed_light_c);
  const float dimension_coefficient[5] = {1, 2, -3, 0, -5};

  /* This should be ~1.0178085e-37 [g cm^2 s^-3 K^-5] */
  const double compton_coefficient_cgs =
      compton_coefficient *
      units_general_cgs_conversion_factor(us, dimension_coefficient);

  /* And now the Compton rate [g cm^2 s^-3 K^-1] == [erg s^-1 K^-1]*/
  cooling->const_Compton_rate_cgs =
      compton_coefficient_cgs * T_CMB_0 * T_CMB_0 * T_CMB_0 * T_CMB_0;
}

/**
 * @brief Restore cooling tables (if applicable) after
 * restart
 *
 * @param cooling the cooling_function_data structure
 * @param cosmo cosmology structure
 */
static INLINE void cooling_restore_tables(struct cooling_function_data* cooling,
                                          const struct cosmology* cosmo) {}

/**
 * @brief Prints the properties of the cooling model to stdout.
 *
 * @param cooling The properties of the cooling function.
 */
static INLINE void cooling_print_backend(
    const struct cooling_function_data* cooling) {

  message("Cooling function is 'Compton cooling'.");
}

/**
 * @brief Clean-up the memory allocated for the cooling routines
 *
 * @param cooling the cooling data structure.
 */
static INLINE void cooling_clean(struct cooling_function_data* cooling) {}

/**
 * @brief Write a cooling struct to the given FILE as a stream of bytes.
 *
 * Nothing to do beyond writing the structure from the stream.
 *
 * @param cooling the struct
 * @param stream the file stream
 */
static INLINE void cooling_struct_dump(
    const struct cooling_function_data* cooling, FILE* stream) {
  restart_write_blocks((void*)cooling, sizeof(struct cooling_function_data), 1,
                       stream, "cooling", "cooling function");
}

/**
 * @brief Restore a hydro_props struct from the given FILE as a stream of
 * bytes.
 *
 * Nothing to do beyond reading the structure from the stream.
 *
 * @param cooling the struct
 * @param stream the file stream
 * @param cosmo #cosmology structure
 */
static INLINE void cooling_struct_restore(struct cooling_function_data* cooling,
                                          FILE* stream,
                                          const struct cosmology* cosmo) {
  restart_read_blocks((void*)cooling, sizeof(struct cooling_function_data), 1,
                      stream, NULL, "cooling function");
}

#endif /* SWIFT_COOLING_COMPTON_H */
