Change-Id: I16387bcb7a1f5198f5394a203a0345332740a147

Combine PhyloXML reader & writer tests into a single test,
and make it more thorough.

Change-Id: Ibb32ece7de203269a8508cb06eee91d94706f197

This class allows us to read a PhyloXML file to generate a
vtkTree.  This commit also contains corresponding change to
vtkPhyloXMLTreeWriter.

Change-Id: Idd7a7a997e24f0c751ee51ee8e2e9eb4c9c05c7a

Extend this class so that it can read from either a file or a
string.

Change-Id: Ida093f0c4c44896ed59da96b8950e7ffa2b6351b

While working with vtkPhyloXMLTreeWriter, I noticed that it would
occasionally output blank lines.  This commit fixes this behavior,
resulting in a more concise output file.

Change-Id: I3bd848198ea299246c1ef4d1f4a6ccea515729bf

176861d8 vtkPythonCommand - Fix indent and variable names
50d601bd vtkPythonCommand - Add support for additional call data types

* pvvtk/pv-master:

Change-Id: I1a00dc35822f8a50be7081040b985609f8120ac0

Utkarsh Ayachit authored 11 years ago and Kitware Robot committed 11 years ago

a43fb6ae Don't reset traversal location in each iteration of box clip filter.

c458abe7 BUG: Duplicate class definition of vtkSeedCallback2

Previous commit(7d5b24444) introduced a new issue of multiple classes with
same name(vtkSeedCallback2) in  TestSeedWidget2 and
TestSeedWidgetNonUniformRepresentation. This change fixes the issue.

Change-Id: Ie7a7274971c4779acd666cf395e992f287eb705f

7d5b2480 BUG: Duplicate class definition in TestSeedWidget2

596243f2 BUG: VTK_JAVA_SOURCE_VERSION to accomodate different java versions

The class vtkSeedCallback was defined in both TestSeedWidget and TestSeedWidget2
causing memory issues and dashboard failures.
Modified the tests to use the new vtkTesting::InteractorEventLoop API.
Added custom interaction to TestSeedWidget2.

Change-Id: I93eed595ca950407dc5e114d030fb93008ceb7c3

9a00db82 STLWriter: Raise an error for non-triangles

a43fb6ae Don't reset traversal location in each iteration of box clip filter.

a5e6d3d4 BUG: fix xdmf test failure

This causes the first cell in the clipped data to be output, rather
than the last, leading to bugs like:

http://paraview.org/Bug/view.php?id=14581

Change-Id: I57427d4e00997c13c0a5c188c30ffe6e59356527

The STL format only supports triangles and previously, it just truncated
polygons silently. Cause an error to occur when this happens so that
users know.

Change-Id: I9c2f96d887074943130a8442d6796cb0c2ce1bbf

17804f38 deprecate this module
039d1d9d fix link errors that happened when I turned on InfovisParallel

bde18864 Fix the way point and cell data arrays are marked for reading.

* pvvtk/pv-master:

Change-Id: I11707e2726d181c1041f02fc3366b67c55d03588

Utkarsh Ayachit authored 11 years ago and Kitware Robot committed 11 years ago

957dddda Merge topic 'FixBlackBoxPlot' into master
01bade26 Merge topic 'Segfault_PlotBox' into master
23d97ae3 Fix black box plots issue.
b3470426 BUG: CreateDefaultLookupTable crashes if Input is NULL.
dd6ee504 Merge topic 'FixBagPlotLegend' into master
e0911e4c Fix bag plot legends.
af6d034e Merge topic 'EnhanceBagPlot' into master
39efc956 Enhance bag plot API to allow specify line and points properties.
e83fc65f Merge topic 'vtkweb-improvement' into master
a8f89050 Fix vtkweb catalyst css
1caadcd1 Merge topic 'vtkweb-error-handling' into master
fa652b66 Add error function to vtk:mouseInteraction RPC
0c34a2e4 Merge topic 'Coverage_MultiThreshold' into master
f3311d5c ENH: Coverage for MultiThreshold.
fb15ddf3 Merge topic 'vtkweb-improvement' into master
c3957363 Various VTK-web improvement
...

183bb5d7 fix the format of PhyloXML references

The PhyloXML specification indicates that references should
match the following regular expression pattern:

[a-zA-Z0-9_]+:[a-zA-Z0-9_\.\-\s]+

In order to do so, we now prepend "VTK:" to the beginning of the
array name.

Change-Id: Ie898e19dc10ec6edd2b67a5b493f55521e15c63d

e90c46ae fix failing tests revealed by gerrit
52d62550 add option to write XML to string instead of file

94a63119 ENH: Improve code coverage for UnicodeStringArray

942444bf Re-enabling tests disabled during modularization for Interaction/Widgets

Fixed dependencies and added baseline

Change-Id: I6621bd523e8811568416a2c1d4e9279b8a6a4f27

The variable can be set to the JDK version installed on the
machine to link against. Default is 1.5 to maintain backwards
compatibility for binary packages.

Change-Id: I4f721c5f8fcf6666971418ee97862d6ae905352b

A test failure was introduced by the commit "BUG: fix some xdmf writer crashes".
This new patch reverts the change which caused the failure.

Change-Id: Ifbb3a68b14f0c5a5cd390fc68d9a50668ca60ac8

Added tests to TestUnicodeStringArrayAPI, bringing coverage from 24%
to 100%.

Change-Id: I48b36bc47090a2966262e2dfd1bb5375024ca078

* pvvtk/pv-master:

Change-Id: I4b2d5f7089cb5e4d29453cfd97163a5aff0eb75a

Utkarsh Ayachit authored 11 years ago and Kitware Robot committed 11 years ago

7fe4ffb4 Merge topic 'empty-array-init' into master
4f1b4a13 Merge topic 'web-catalyst-composite-widget' into master
3bb60f29 better UI for catalyst re-sampler web widget
b6700dfb Better composite catalyst web widget
398af669 Merge topic 'vtk-surface-reconstruction-fix-origin-and-spacing' into master
90d75926 Handle empty array initialization in numpy_support.
618d6279 Merge topic 'vtkCellLocator-precision-issue' into master
9fc4c29d Merge topic 'Coverage_ParametricSpline' into master
5565b59b Merge topic 'phyloxml_tree_writer' into master
4b3de93f Merge remote-tracking branch 'pvvtk/pv-master' into HEAD
e2b5f16b ENH: Unit test for ParametricSpline
5a894ac2 Merge topic 'RemoveBogusLineInfo' into master
42415809 COMP: Remove bogus line info from generated files
c71d9c21 get the baseline file's path from the command line
81534288 add baseline directory
bba7656c improve the thoroughness of TestPhyloXMLTreeWriter
...

6cb7f089 ENH: Add some more coverage for MultiThreshold

subclasses of vtkXMLWriter should now call OpenStream & CloseStream
as opposed to OpenFile & CloseFile.

Change-Id: I39ccdc711d07e96763fc941b5fcd80b1da6b38c5

35261130 Fix double to unsigned char cast error on clang compiler.

Change-Id: I3979f3eeb2407a9924e57cf4b8540ea67693807e

This commit enables vtkXMLWriter and its subclasses to write
their output to a string instead of a file.

Change-Id: Idff93039f9536379e3ef9abad6ea4ce18b4f2a60

e64f69de Add cost information in workbench analysis

Change-Id: Ie4c3eb07011076b5fe1cd9731cb749aa9606668c