fix windows compilation

This one snuck in during the recent big big merge.
With the if WIN32 code in the headers, we get errors like
C:\PROGRA~2\MICROS~2.0\VC\bin\cl.exe ....lots skipped.... \
/FoVTK\ThirdParty\xdmf3\vtkxdmf3\core\CMakeFiles\XdmfCoreObjects.dir\XdmfHeavyDataDescription.cpp.obj \
/FdVTK\ThirdParty\xdmf3\vtkxdmf3\core\CMakeFiles\XdmfCoreObjects.dir\ \
/FS -c C:\bbd\1c569048\source-paraview\VTK\ThirdParty\xdmf3\vtkxdmf3\core\XdmfHeavyDataDescription.cpp
C:\bbd\1c569048\build\install\include\boost-1_56\boost/smart_ptr/shared_ptr.hpp(658) : error C2562: 'boost::shared_ptr<Loki::BaseVisitor>::operator []' : 'void' function returning a value
        C:\bbd\1c569048\build\install\include\boost-1_56\boost/smart_ptr/shared_ptr.hpp(653) : see declaration of 'boost::shared_ptr<Loki::BaseVisitor>::operator []'

Really really need windows tests on the xdmf dashboard, and xdmf turned on in vtk buildbot.
This was only detected all the way up in ParaView pain.

See merge request !17

This one snuck in during the recent big big merge.
With the if WIN32 code in the headers, we get errors like
C:\PROGRA~2\MICROS~2.0\VC\bin\cl.exe ....lots skipped.... \
/FoVTK\ThirdParty\xdmf3\vtkxdmf3\core\CMakeFiles\XdmfCoreObjects.dir\XdmfHeavyDataDescription.cpp.obj \
/FdVTK\ThirdParty\xdmf3\vtkxdmf3\core\CMakeFiles\XdmfCoreObjects.dir\ \
/FS -c C:\bbd\1c569048\source-paraview\VTK\ThirdParty\xdmf3\vtkxdmf3\core\XdmfHeavyDataDescription.cpp
C:\bbd\1c569048\build\install\include\boost-1_56\boost/smart_ptr/shared_ptr.hpp(658) : error C2562: 'boost::shared_ptr<Loki::BaseVisitor>::operator []' : 'void' function returning a value
        C:\bbd\1c569048\build\install\include\boost-1_56\boost/smart_ptr/shared_ptr.hpp(653) : see declaration of 'boost::shared_ptr<Loki::BaseVisitor>::operator []'

Really really need windows tests on the xdmf dashboard, and xdmf turned on in vtk buildbot.
This was only detected all the way up in ParaView pain.

Clean excess whitespace from content pulled from XML

Another attempt to fix an issue involving improperly formed strings while reading.

@demarle 

See merge request !16

expose parent class's methods to avoid comp warnings

-Woverloaded-virtual complains because XdmfGrid's get* is
hidden and made uncallable by the non virtual method of the same
in the child class. Making the child virtual is problematic since
the template parameter is not const in both.

This change ensures that both are visible to the user
and prevents the compilation warning.

See merge request !13

-Woverloaded-virtual complains because XdmfGrid's get* is
hidden and made uncallable by the non virtual method of the same
in the child class. Making the child virtual is problematic since
the template parameter is not const in both.

This change ensures that both are visible to the user
and prevents the compilation warning.

changes for fortran and shared library bulilding with python wrapping

Here are some necessary changes for fortran and for building a shared library with python wrapping

Also please turn on the testing of the fortran test code in the auto testing system.

Thanks,

Joe Hennessey

See merge request !11

Preventing TIFF tests from building when TIFF isn't found

@demarle 

To fix: https://open.cdash.org/viewBuildError.php?buildid=4414462 

See merge request !10

Fix fortran wrapper

Fix some fortran declarations as discussed in xdmf/xdmf!8

@demarle  @AndrewBurns 

See merge request !9

Import arl latest

Tests on my linux workstation are here
https://open.cdash.org/buildSummary.php?buildid=4409696

The three failing tests fail here no matter what branch I am on so confident they are not introduced with this commit.
Tested with shared/static, wrap_python and no_wrap python.
Have not tested dsm, or on windows or mac or by importing into VTK yet.
Not entirely sure I got the new polyhedra merged in correctly.


See merge request !8

See VTK's a3bd88db "remove xml2's deprecated reference() function"

thanks Andrew for finding these

these tests fail with it the other way.
C_CTestXdmfWriter (Failed)
C_CTestXdmfAggregate (Failed)
Cxx_TestXdmfAggregate (Failed)
Cxx_TestXdmfFunction (Failed) new fail
Cxx_TestXdmfSubset

xml file for aggregate is no different, but reading
balks at lack of "Content" the other way around

vtk side changed CMAKE_BINARY_DIR to CMAKE_CURRENT_BINARY_DIR
so that xdmf would build cleanly in its own place within projects
that use it. Doing so moved xdmfcore.py and xdmfcoredsm.py
but then ctest wouldn't find them. This change puts the python
submodules into the top level.

rather than force -fPIC into CMakeLists.txt we now explicitly turn
on position independent compilation for each of the three internal
object libs. Do it this way because fpic is not valid on all
compilers.

fix a typo



See merge request !7

Changes from ARL's Repo (C Wrappers, DSM rework, Custom Types, Templates, GridControllers, TIFF integration, XdmfAggregate)

allow wrapping without DSM



See merge request !6

Add support for Polyhedron cells

Elements of type Polyhedron (i.e. N face cells, where each face is a M edge polygon) are in the following format: 
[nCellFaces, nFace0Pts, id0_0, id0_1, ..., nFace1Pts, id1_0, id1_1, ..., ...]

This has first been proposed in a MR to VTK (vtk/vtk!1255), which contains the necessary changes to VTK. The VTK MR also has example/test files attached that demonstrated the functionality.

Ping: @demarle 


See merge request !5

Added a top-level README.md file in Markdown format.

Added a `README.md` file in Markdown format. This file contains brief instructions to build XDMF from source code. The contents of this file are displayed on the project page at Gitlab. Additional documentation for new users may be added to this file in the future. 

@demarle

See merge request !4

Elements of type Polyhedron (i.e. N face cells, where each face is a M edge
polygon) are in the following format:
[nCellFaces, nFace0Pts, id0_0, id0_1, ..., nFace1Pts, id1_0, id1_1, ..., ...]