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Commit de5d5235 authored by Andrew J. Burns (Cont's avatar Andrew J. Burns (Cont
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Merge branch 'ajb-dev' of /data/Repository/Xdmf2 into ajb-dev

parents 3a71f5d2 63798d2b
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tests/Python/editedtestoutput.xmf 0 → 100644
View file @ de5d5235
<?xml version="1.0" encoding="utf-8"?>
<Xdmf xmlns:xi="http://www.w3.org/2001/XInclude" Version="2.0">
<Domain>
<Information Name="Domain" Value="This is the primary data structure in Xdmf">
<Information Name="Information" Value="Information can have information"/>
</Information>
<Grid CollectionType="Spatial" GridType="Collection" Name="GridCollection Example">
<Information Name="Grid Collection 1" Value="This is the main grid collection"/>
<Geometry Type="None"/>
<Topology Dimensions="0" Type="NoTopology"/>
<Map Name="">
<DataItem DataType="Int" Dimensions="13" Format="XML" Precision="4">1 1 1 1 1 1 2 2 3 3 3 3 3</DataItem>
<DataItem DataType="Int" Dimensions="13" Format="XML" Precision="4">0 1 2 3 4 5 3 5 0 1 2 4 5</DataItem>
<DataItem DataType="Int" Dimensions="13" Format="XML" Precision="4">0 1 2 3 4 5 1 5 2 3 5 0 1</DataItem>
</Map>
<Map Name="">
<DataItem DataType="Int" Dimensions="13" Format="XML" Precision="4">0 0 0 0 0 0 2 2 3 3 3 3 3</DataItem>
<DataItem DataType="Int" Dimensions="13" Format="XML" Precision="4">0 1 2 3 4 5 3 5 0 1 2 4 5</DataItem>
<DataItem DataType="Int" Dimensions="13" Format="XML" Precision="4">0 1 2 3 4 5 1 5 2 3 5 0 1</DataItem>
</Map>
<Map Name="">
<DataItem DataType="Int" Dimensions="7" Format="XML" Precision="4">0 0 1 1 3 3 3</DataItem>
<DataItem DataType="Int" Dimensions="7" Format="XML" Precision="4">1 5 1 5 0 2 5</DataItem>
<DataItem DataType="Int" Dimensions="7" Format="XML" Precision="4">3 5 3 5 4 6 1</DataItem>
</Map>
<Map Name="">
<DataItem DataType="Int" Dimensions="13" Format="XML" Precision="4">0 0 0 0 0 1 1 1 1 1 2 2 2</DataItem>
<DataItem DataType="Int" Dimensions="13" Format="XML" Precision="4">0 1 2 3 5 0 1 2 3 5 1 4 6</DataItem>
<DataItem DataType="Int" Dimensions="13" Format="XML" Precision="4">4 5 0 1 2 4 5 0 1 2 5 0 2</DataItem>
</Map>
<Grid CollectionType="None" GridType="Collection" Name="Secondary grid collection">
<Geometry Type="None"/>
<Topology Dimensions="0" Type="NoTopology"/>
</Grid>
<Grid Name="Curvilinear Grid Example">
<Information Name="Curvilinear Grid" Value="This is an example curvilinear grid"/>
<Time Value="5">
<Information Name="Time" Value="The Time of the Curvilinear Grid"/>
</Time>
<Geometry Type="XYZ">
<Information Name="Geometry" Value="The geometry of the curvilinear grid"/>
<DataItem DataType="Float" Dimensions="39" Format="XML" Precision="8">2.1 2.1 3.1 3.1 2.1 3.1 5.1 2.1 4.1 2.1 3.1 3.1 3.1 3.1 3.1 5.1 4.1 4.1 2.1 2.1 1.1 3.1 2.1 1.1 5.1 2.1 -0.1 2.1 3.1 1.1 2.1 3.1 0.9 5.1 4.1 -0.1 36 37 38</DataItem>
</Geometry>
<Topology Dimensions="13 13 13" Type="3DSMesh"/>
<Attribute Center="Node" Name="Global Node Equivalencies" Type="GlobalId">
<Information Name="Global Node Equivalencies" Value="These are the global nodes that accociate with the local nodes"/>
<DataItem DataType="Int" Dimensions="7" Format="XML" Precision="4">3 6 2 8 1 7 5</DataItem>
</Attribute>
<xi:include xpointer="element(/1/1/2/5)"/>
</Grid>
<Grid Name="Rectilinear Grid Example">
<Time Value="5">
<Information Name="Time" Value="The time of the rectiliniear grid"/>
</Time>
<Geometry Type="VXVYVZ">
<DataItem DataType="Float" Dimensions="13" Format="XML" Precision="8">2.1 2.1 3.1 3.1 2.1 3.1 5.1 2.1 4.1 2.1 3.1 3.1 12</DataItem>
<DataItem DataType="Float" Dimensions="13" Format="XML" Precision="8">3.1 3.1 3.1 5.1 4.1 4.1 2.1 2.1 1.1 3.1 2.1 1.1 12</DataItem>
<DataItem DataType="Float" Dimensions="13" Format="XML" Precision="8">5.1 2.1 -0.1 2.1 3.1 1.1 2.1 3.1 0.9 5.1 4.1 -0.1 12</DataItem>
</Geometry>
<Topology Dimensions="13 13 13" Type="3DRectMesh"/>
<Attribute Center="Node" Name="Global Node Equivalencies" Type="GlobalId">
<Information Name="Global Node Equivalencies" Value="These are the global nodes that associate with the local nodes"/>
<DataItem DataType="Int" Dimensions="6" Format="XML" Precision="4">6 4 3 7 9 8</DataItem>
</Attribute>
<xi:include xpointer="element(/1/1/2/6)"/>
</Grid>
<Grid Name="Regular Grid Example">
<Time Value="5"/>
<Geometry Type="ORIGIN_DXDYDZ">
<DataItem DataType="Float" Dimensions="3" Format="XML" Precision="8">1 1 1</DataItem>
<DataItem DataType="Float" Dimensions="3" Format="XML" Precision="8">11 11 11</DataItem>
</Geometry>
<Topology Dimensions="6 6 6" Type="3DCoRectMesh"/>
<Attribute Center="Node" Name="Global Node Equivalencies" Type="GlobalId">
<DataItem DataType="Int" Dimensions="7" Format="XML" Precision="4">3 5 1 2 4 8 0</DataItem>
</Attribute>
<xi:include xpointer="element(/1/1/2/7)"/>
</Grid>
<Grid Name="Unstructured Grid Example">
<Time Value="5">
<Information Name="Time" Value="This is the time for the Unstructured Grid"/>
</Time>
<Geometry Type="XYZ">
<Information Name="Geometry" Value="This is the geometry associated with the unstructured grid"/>
<DataItem DataType="Float" Dimensions="36" Format="XML" Precision="8">1.1 1.1 2.1 2.1 1.1 2.1 4.1 1.1 3.1 1.1 2.1 2.1 2.1 2.1 2.1 4.1 3.1 3.1 1.1 1.1 -0.1 2.1 1.1 -0.1 4.1 1.1 -1.1 1.1 2.1 -0.1 2.1 2.1 -0.1 4.1 3.1 -1.1</DataItem>
</Geometry>
<Topology Dimensions="2" Type="Hexahedron">
<DataItem DataType="Int" Dimensions="16" Format="XML" Precision="4">1 2 8 7 4 5 11 10 2 3 9 8 5 6 12 11</DataItem>
</Topology>
<Attribute Center="Node" Name="Global Node Equivalencies" Type="GlobalId">
<DataItem DataType="Int" Dimensions="6" Format="XML" Precision="4">5 2 8 7 9 1</DataItem>
</Attribute>
<xi:include xpointer="element(/1/1/2/4)"/>
<Set Name="Unstructured Grid's Set" Type="Node">
<Information Name="Data Set" Value="This is a set of arbitrary data"/>
<Attribute Center="Node" Name="The Set's attribute" Type="Scalar">
<DataItem DataType="Float" Dimensions="9" Format="XML" Precision="8">1.9 2.8 3.7 4.6 5.5 6.4 7.3 8.2 9.1</DataItem>
</Attribute>
<DataItem DataType="Float" Dimensions="10" Format="XML" Precision="8">1.1 2.2 3.3 4.4 5.5 6.6 7.7 8.8 9.9 0.23</DataItem>
</Set>
</Grid>
</Grid>
<xi:include xpointer="element(/1/1/2/9)"/>
<xi:include xpointer="element(/1/1/2/10)"/>
<xi:include xpointer="element(/1/1/2/11)"/>
<xi:include xpointer="element(/1/1/2/12)"/>
</Domain>
</Xdmf>
tests/Python/testoutput.xmf 0 → 100644
View file @ de5d5235
<?xml version="1.0" encoding="utf-8"?>
<Xdmf xmlns:xi="http://www.w3.org/2001/XInclude" Version="2.0">
<Domain>
<Information Name="Domain" Value="This is the primary data structure in Xdmf">
<Information Name="Information" Value="Information can have information"/>
</Information>
<Grid CollectionType="Spatial" GridType="Collection" Name="GridCollection Example">
<Information Name="Grid Collection 1" Value="This is the main grid collection"/>
<Geometry Type="None"/>
<Topology Dimensions="0" Type="NoTopology"/>
<Map Name="">
<DataItem DataType="Int" Dimensions="13" Format="XML" Precision="4">1 1 1 1 1 1 2 2 3 3 3 3 3</DataItem>
<DataItem DataType="Int" Dimensions="13" Format="XML" Precision="4">0 1 2 3 4 5 3 5 0 1 2 4 5</DataItem>
<DataItem DataType="Int" Dimensions="13" Format="XML" Precision="4">0 1 2 3 4 5 1 5 2 3 5 0 1</DataItem>
</Map>
<Map Name="">
<DataItem DataType="Int" Dimensions="13" Format="XML" Precision="4">0 0 0 0 0 0 2 2 3 3 3 3 3</DataItem>
<DataItem DataType="Int" Dimensions="13" Format="XML" Precision="4">0 1 2 3 4 5 3 5 0 1 2 4 5</DataItem>
<DataItem DataType="Int" Dimensions="13" Format="XML" Precision="4">0 1 2 3 4 5 1 5 2 3 5 0 1</DataItem>
</Map>
<Map Name="">
<DataItem DataType="Int" Dimensions="7" Format="XML" Precision="4">0 0 1 1 3 3 3</DataItem>
<DataItem DataType="Int" Dimensions="7" Format="XML" Precision="4">1 5 1 5 0 2 5</DataItem>
<DataItem DataType="Int" Dimensions="7" Format="XML" Precision="4">3 5 3 5 4 6 1</DataItem>
</Map>
<Map Name="">
<DataItem DataType="Int" Dimensions="13" Format="XML" Precision="4">0 0 0 0 0 1 1 1 1 1 2 2 2</DataItem>
<DataItem DataType="Int" Dimensions="13" Format="XML" Precision="4">0 1 2 3 5 0 1 2 3 5 1 4 6</DataItem>
<DataItem DataType="Int" Dimensions="13" Format="XML" Precision="4">4 5 0 1 2 4 5 0 1 2 5 0 2</DataItem>
</Map>
<Grid CollectionType="None" GridType="Collection" Name="Secondary grid collection">
<Geometry Type="None"/>
<Topology Dimensions="0" Type="NoTopology"/>
</Grid>
<Grid Name="Curvilinear Grid Example">
<Information Name="Curvilinear Grid" Value="This is an example curvilinear grid"/>
<Time Value="5">
<Information Name="Time" Value="The Time of the Curvilinear Grid"/>
</Time>
<Geometry Type="XYZ">
<Information Name="Geometry" Value="The geometry of the curvilinear grid"/>
<DataItem DataType="Float" Dimensions="36" Format="XML" Precision="8">1.1 1.1 2.1 2.1 1.1 2.1 4.1 1.1 3.1 1.1 2.1 2.1 2.1 2.1 2.1 4.1 3.1 3.1 1.1 1.1 0.1 2.1 1.1 0.1 4.1 1.1 -1.1 1.1 2.1 0.1 1.1 2.1 -0.1 4.1 3.1 -1.1</DataItem>
</Geometry>
<Topology Dimensions="12 12 12" Type="3DSMesh"/>
<Attribute Center="Node" Name="Global Node Equivalencies" Type="GlobalId">
<Information Name="Global Node Equivalencies" Value="These are the global nodes that accociate with the local nodes"/>
<DataItem DataType="Int" Dimensions="6" Format="XML" Precision="4">1 4 5 7 3 6</DataItem>
</Attribute>
<xi:include xpointer="element(/1/1/2/5)"/>
</Grid>
<Grid Name="Rectilinear Grid Example">
<Time Value="5">
<Information Name="Time" Value="The time of the rectiliniear grid"/>
</Time>
<Geometry Type="VXVYVZ">
<DataItem DataType="Float" Dimensions="12" Format="XML" Precision="8">1.1 1.1 2.1 2.1 1.1 2.1 4.1 1.1 3.1 1.1 2.1 2.1</DataItem>
<DataItem DataType="Float" Dimensions="12" Format="XML" Precision="8">2.1 2.1 2.1 4.1 3.1 3.1 1.1 1.1 0.1 2.1 1.1 0.1</DataItem>
<DataItem DataType="Float" Dimensions="12" Format="XML" Precision="8">4.1 1.1 -1.1 1.1 2.1 0.1 1.1 2.1 -0.1 4.1 3.1 -1.1</DataItem>
</Geometry>
<Topology Dimensions="12 12 12" Type="3DRectMesh"/>
<Attribute Center="Node" Name="Global Node Equivalencies" Type="GlobalId">
<Information Name="Global Node Equivalencies" Value="These are the global nodes that associate with the local nodes"/>
<DataItem DataType="Int" Dimensions="6" Format="XML" Precision="4">2 7 9 0 8 6</DataItem>
</Attribute>
<xi:include xpointer="element(/1/1/2/6)"/>
</Grid>
<Grid Name="Regular Grid Example">
<Time Value="5"/>
<Geometry Type="ORIGIN_DXDYDZ">
<DataItem DataType="Float" Dimensions="3" Format="XML" Precision="8">0 0 0</DataItem>
<DataItem DataType="Float" Dimensions="3" Format="XML" Precision="8">10 10 10</DataItem>
</Geometry>
<Topology Dimensions="5 5 5" Type="3DCoRectMesh"/>
<Attribute Center="Node" Name="Global Node Equivalencies" Type="GlobalId">
<DataItem DataType="Int" Dimensions="7" Format="XML" Precision="4">3 6 1 4 2 5 9</DataItem>
</Attribute>
<xi:include xpointer="element(/1/1/2/7)"/>
</Grid>
<Grid Name="Unstructured Grid Example">
<Time Value="5">
<Information Name="Time" Value="This is the time for the Unstructured Grid"/>
</Time>
<Geometry Type="XYZ">
<Information Name="Geometry" Value="This is the geometry associated with the unstructured grid"/>
<DataItem DataType="Float" Dimensions="36" Format="XML" Precision="8">0.1 0.1 1.1 1.1 0.1 1.1 3.1 0.1 2.1 0.1 1.1 1.1 1.1 1.1 1.1 3.1 2.1 2.1 0.1 0.1 -1.1 1.1 0.1 -1.1 3.1 0.1 -2.1 0.1 1.1 -1.1 1.1 1.1 -1.1 3.1 2.1 -2.1</DataItem>
</Geometry>
<Topology Dimensions="2" Type="Hexahedron">
<DataItem DataType="Int" Dimensions="16" Format="XML" Precision="4">0 1 7 6 3 4 10 9 1 2 8 7 4 5 11 10</DataItem>
</Topology>
<Attribute Center="Node" Name="Global Node Equivalencies" Type="GlobalId">
<DataItem DataType="Int" Dimensions="6" Format="XML" Precision="4">1 4 5 7 3 6</DataItem>
</Attribute>
<xi:include xpointer="element(/1/1/2/4)"/>
<Set Name="Unstructured Grid's Set" Type="Node">
<Information Name="Data Set" Value="This is a set of arbitrary data"/>
<Attribute Center="Node" Name="The Set's attribute" Type="Scalar">
<DataItem DataType="Float" Dimensions="9" Format="XML" Precision="8">1.9 2.8 3.7 4.6 5.5 6.4 7.3 8.2 9.1</DataItem>
</Attribute>
<DataItem DataType="Float" Dimensions="5" Format="XML" Precision="8">5.1 4.2 3.3 2.4 1.5</DataItem>
</Set>
</Grid>
</Grid>
<xi:include xpointer="element(/1/1/2/9)"/>
<xi:include xpointer="element(/1/1/2/10)"/>
<xi:include xpointer="element(/1/1/2/11)"/>
<xi:include xpointer="element(/1/1/2/12)"/>
</Domain>
</Xdmf>
utils/tests/Fortran/edited_output.xmf 0 → 100644
View file @ de5d5235
<?xml version="1.0" encoding="utf-8"?>
<Xdmf xmlns:xi="http://www.w3.org/2001/XInclude" Version="2.0">
<Domain>
<Grid CollectionType="Temporal" GridType="Collection" Name="Temporal">
<Information Name="GridCollection1" Value="This is Grid collection 1"/>
<Geometry Type="None"/>
<Topology Dimensions="0" Type="NoTopology"/>
<Grid Name="Edited Grid">
<Information Name="Edited Key" Value="Edited Value"/>
<Time Value="1"/>
<Geometry Type="XYZ">
<DataItem DataType="Float" Dimensions="36" Format="XML" Precision="4">0 0 1 1 0 1 3 0 2 0 1 1 1 1 1 3 2 2 0 0 -1 1 0 -1 3 0 -2 0 1 -1 1 1 -1 3 2 -2</DataItem>
</Geometry>
<Topology Dimensions="2" Type="Hexahedron">
<DataItem DataType="Int" Dimensions="16" Format="XML" Precision="4">0 1 7 6 3 4 10 9 1 2 8 7 4 5 11 10</DataItem>
</Topology>
<Attribute Center="Node" Name="NodeValues" Type="Scalar">
<Information Name="Attrib1" Value="This is Attribute 1"/>
<DataItem DataType="Float" Dimensions="12" Format="XML" Precision="8">100 200 300 300 400 500 300 400 500 500 600 700</DataItem>
</Attribute>
<Attribute Center="Node" Name="Edited Attribute" Type="Scalar">
<DataItem DataType="Float" Dimensions="4" Format="XML" Precision="8">100 200 300 300</DataItem>
</Attribute>
<Attribute Center="Node" Name="SmallNodeValues" Type="Scalar">
<DataItem DataType="Float" Dimensions="6" Format="XML" Precision="8">100 200 300 300 400 500</DataItem>
</Attribute>
<Map Name="TestMap">
<DataItem DataType="Int" Dimensions="5" Format="XML" Precision="4">1 1 1 1 1</DataItem>
<DataItem DataType="Int" Dimensions="5" Format="XML" Precision="4">2 2 3 3 3</DataItem>
<DataItem DataType="Int" Dimensions="5" Format="XML" Precision="4">3 4 3 5 8</DataItem>
</Map>
<Set Name="EditedSet" Type="Node">
<DataItem DataType="Float" Dimensions="12" Format="XML" Precision="8">100 200 300 300 400 500 300 400 500 500 600 700</DataItem>
</Set>
</Grid>
<Grid Name="Identical">
<Time Value="2"/>
<xi:include xpointer="element(/1/1/1/4/3)"/>
<xi:include xpointer="element(/1/1/1/4/4)"/>
<Attribute Center="Cell" Name="CellValues" Type="Scalar">
<Information Name="Attrib2" Value="This is Attribute 2"/>
<DataItem DataType="Float" Dimensions="2" Format="XML" Precision="8">100 200</DataItem>
</Attribute>
<xi:include xpointer="element(/1/1/1/4/5)"/>
<xi:include xpointer="element(/1/1/1/4/8)"/>
<Set Name="TestSet" Type="Node">
<DataItem DataType="Float" Dimensions="12" Format="XML" Precision="8">100 200 300 300 400 500 300 400 500 500 600 700</DataItem>
</Set>
</Grid>
</Grid>
</Domain>
</Xdmf>
utils/tests/Fortran/my_output.xmf 0 → 100644
View file @ de5d5235
<?xml version="1.0" encoding="utf-8"?>
<Xdmf xmlns:xi="http://www.w3.org/2001/XInclude" Version="2.0">
<Domain>
<Grid CollectionType="Temporal" GridType="Collection" Name="Temporal">
<Information Name="GridCollection1" Value="This is Grid collection 1"/>
<Geometry Type="None"/>
<Topology Dimensions="0" Type="NoTopology"/>
<Grid Name="TestGrid">
<Information Name="Grid1" Value="This is Grid 1"/>
<Time Value="1"/>
<Geometry Type="XYZ">
<DataItem DataType="Float" Dimensions="36" Format="XML" Precision="4">0 0 1 1 0 1 3 0 2 0 1 1 1 1 1 3 2 2 0 0 -1 1 0 -1 3 0 -2 0 1 -1 1 1 -1 3 2 -2</DataItem>
</Geometry>
<Topology Dimensions="2" Type="Hexahedron">
<DataItem DataType="Int" Dimensions="16" Format="XML" Precision="4">0 1 7 6 3 4 10 9 1 2 8 7 4 5 11 10</DataItem>
</Topology>
<Attribute Center="Node" Name="NodeValues" Type="Scalar">
<Information Name="Attrib1" Value="This is Attribute 1"/>
<DataItem DataType="Float" Dimensions="12" Format="XML" Precision="8">100 200 300 300 400 500 300 400 500 500 600 700</DataItem>
</Attribute>
<Attribute Center="Cell" Name="CellValues" Type="Scalar">
<Information Name="Attrib2" Value="This is Attribute 2"/>
<DataItem DataType="Float" Dimensions="2" Format="XML" Precision="8">100 200</DataItem>
</Attribute>
<Attribute Center="Node" Name="SmallNodeValues" Type="Scalar">
<DataItem DataType="Float" Dimensions="6" Format="XML" Precision="8">100 200 300 300 400 500</DataItem>
</Attribute>
<Map Name="TestMap">
<DataItem DataType="Int" Dimensions="5" Format="XML" Precision="4">1 1 1 1 1</DataItem>
<DataItem DataType="Int" Dimensions="5" Format="XML" Precision="4">2 2 3 3 3</DataItem>
<DataItem DataType="Int" Dimensions="5" Format="XML" Precision="4">3 4 3 5 8</DataItem>
</Map>
<Set Name="TestSet" Type="Node">
<DataItem DataType="Float" Dimensions="12" Format="XML" Precision="8">100 200 300 300 400 500 300 400 500 500 600 700</DataItem>
</Set>
</Grid>
<Grid Name="Identical">
<Time Value="2"/>
<xi:include xpointer="element(/1/1/1/4/3)"/>
<xi:include xpointer="element(/1/1/1/4/4)"/>
<xi:include xpointer="element(/1/1/1/4/6)"/>
<xi:include xpointer="element(/1/1/1/4/5)"/>
<xi:include xpointer="element(/1/1/1/4/8)"/>
<xi:include xpointer="element(/1/1/1/4/9)"/>
</Grid>
</Grid>
</Domain>
</Xdmf>
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