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Xdmf
Commit 25380d0d authored by Andrew J. Burns (Cont's avatar Andrew J. Burns (Cont
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merged from master

parents 9075be36 004113fc
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Showing with 76 additions and 53 deletions
Xdmf.i
View file @ 25380d0d
......@@ -119,7 +119,7 @@ swig -v -c++ -python -o XdmfPython.cpp Xdmf.i
// Typemaps that work for Java
%typemap(out) shared_ptr<XdmfItem> {
%typemap(out) shared_ptr<XdmfItem> {
if(shared_ptr<XdmfAttribute> value = shared_dynamic_cast<XdmfAttribute>($1)) {
*(shared_ptr< XdmfAttribute > **)&($result) = value ? new shared_ptr< XdmfAttribute >(value) : 0;
}
......@@ -250,54 +250,70 @@ swig -v -c++ -python -o XdmfPython.cpp Xdmf.i
from XdmfCore import *
}
%typemap(out) shared_ptr<XdmfItem> {
if(shared_ptr<XdmfAttribute> attribute = shared_dynamic_cast<XdmfAttribute>($1)) {
$result = SWIG_NewPointerObj(SWIG_as_voidptr(new shared_ptr<XdmfAttribute>(attribute)), SWIGTYPE_p_boost__shared_ptrT_XdmfAttribute_t, SWIG_POINTER_OWN);
}
else if(shared_ptr<XdmfCurvilinearGrid> gridCurvilinear = shared_dynamic_cast<XdmfCurvilinearGrid>($1)) {
$result = SWIG_NewPointerObj(SWIG_as_voidptr(new shared_ptr<XdmfCurvilinearGrid>(gridCurvilinear)), SWIGTYPE_p_boost__shared_ptrT_XdmfCurvilinearGrid_t, SWIG_POINTER_OWN);
}
else if(shared_ptr<XdmfDomain> domain = shared_dynamic_cast<XdmfDomain>($1)) {
$result = SWIG_NewPointerObj(SWIG_as_voidptr(new shared_ptr<XdmfDomain>(domain)), SWIGTYPE_p_boost__shared_ptrT_XdmfDomain_t, SWIG_POINTER_OWN);
}
else if(shared_ptr<XdmfGeometry> geometry = shared_dynamic_cast<XdmfGeometry>($1)) {
$result = SWIG_NewPointerObj(SWIG_as_voidptr(new shared_ptr<XdmfGeometry>(geometry)), SWIGTYPE_p_boost__shared_ptrT_XdmfGeometry_t, SWIG_POINTER_OWN);
}
else if(shared_ptr<XdmfGraph> graph = shared_dynamic_cast<XdmfGraph>($1)) {
$result = SWIG_NewPointerObj(SWIG_as_voidptr(new shared_ptr<XdmfGraph>(graph)), SWIGTYPE_p_boost__shared_ptrT_XdmfGraph_t, SWIG_POINTER_OWN);
}
else if(shared_ptr<XdmfGridCollection> gridCollection = shared_dynamic_cast<XdmfGridCollection>($1)) {
$result = SWIG_NewPointerObj(SWIG_as_voidptr(new shared_ptr<XdmfGridCollection>(gridCollection)), SWIGTYPE_p_boost__shared_ptrT_XdmfGridCollection_t, SWIG_POINTER_OWN);
}
else if(shared_ptr<XdmfInformation> information = shared_dynamic_cast<XdmfInformation>($1)) {
$result = SWIG_NewPointerObj(SWIG_as_voidptr(new shared_ptr<XdmfInformation>(information)), SWIGTYPE_p_boost__shared_ptrT_XdmfInformation_t, SWIG_POINTER_OWN);
}
else if(shared_ptr<XdmfMap> map = shared_dynamic_cast<XdmfMap>($1)) {
$result = SWIG_NewPointerObj(SWIG_as_voidptr(new shared_ptr<XdmfMap>(map)), SWIGTYPE_p_boost__shared_ptrT_XdmfMap_t, SWIG_POINTER_OWN);
}
else if(shared_ptr<XdmfRectilinearGrid> gridRectilinear = shared_dynamic_cast<XdmfRectilinearGrid>($1)) {
$result = SWIG_NewPointerObj(SWIG_as_voidptr(new shared_ptr<XdmfRectilinearGrid>(gridRectilinear)), SWIGTYPE_p_boost__shared_ptrT_XdmfRectilinearGrid_t, SWIG_POINTER_OWN);
}
else if(shared_ptr<XdmfRegularGrid> gridRegular = shared_dynamic_cast<XdmfRegularGrid>($1)) {
$result = SWIG_NewPointerObj(SWIG_as_voidptr(new shared_ptr<XdmfRegularGrid>(gridRegular)), SWIGTYPE_p_boost__shared_ptrT_XdmfRegularGrid_t, SWIG_POINTER_OWN);
}
else if(shared_ptr<XdmfSet> set = shared_dynamic_cast<XdmfSet>($1)) {
$result = SWIG_NewPointerObj(SWIG_as_voidptr(new shared_ptr<XdmfSet>(set)), SWIGTYPE_p_boost__shared_ptrT_XdmfSet_t, SWIG_POINTER_OWN);
}
else if(shared_ptr<XdmfTime> time = shared_dynamic_cast<XdmfTime>($1)) {
$result = SWIG_NewPointerObj(SWIG_as_voidptr(new shared_ptr<XdmfTime>(time)), SWIGTYPE_p_boost__shared_ptrT_XdmfTime_t, SWIG_POINTER_OWN);
}
else if(shared_ptr<XdmfTopology> topology = shared_dynamic_cast<XdmfTopology>($1)) {
$result = SWIG_NewPointerObj(SWIG_as_voidptr(new shared_ptr<XdmfTopology>(topology)), SWIGTYPE_p_boost__shared_ptrT_XdmfTopology_t, SWIG_POINTER_OWN);
}
else if(shared_ptr<XdmfUnstructuredGrid> gridUnstructured = shared_dynamic_cast<XdmfUnstructuredGrid>($1)) {
$result = SWIG_NewPointerObj(SWIG_as_voidptr(new shared_ptr<XdmfUnstructuredGrid>(gridUnstructured)), SWIGTYPE_p_boost__shared_ptrT_XdmfUnstructuredGrid_t, SWIG_POINTER_OWN);
}
else {
$result = SWIG_NewPointerObj(SWIG_as_voidptr(new shared_ptr<XdmfItem>($1)), SWIGTYPE_p_boost__shared_ptrT_XdmfItem_t, SWIG_POINTER_OWN);
%fragment("XdmfItemCast", "header") {
#include <XdmfSharedPtr.hpp>
PyObject * XdmfItemCast(shared_ptr<XdmfItem> obj) {
PyObject * result;
if(shared_ptr<XdmfAttribute> attribute = shared_dynamic_cast<XdmfAttribute>(obj)) {
result = SWIG_NewPointerObj(SWIG_as_voidptr(new shared_ptr<XdmfAttribute>(attribute)), SWIGTYPE_p_boost__shared_ptrT_XdmfAttribute_t, SWIG_POINTER_OWN);
}
else if(shared_ptr<XdmfCurvilinearGrid> gridCurvilinear = shared_dynamic_cast<XdmfCurvilinearGrid>(obj)) {
result = SWIG_NewPointerObj(SWIG_as_voidptr(new shared_ptr<XdmfCurvilinearGrid>(gridCurvilinear)), SWIGTYPE_p_boost__shared_ptrT_XdmfCurvilinearGrid_t, SWIG_POINTER_OWN);
}
else if(shared_ptr<XdmfDomain> domain = shared_dynamic_cast<XdmfDomain>(obj)) {
result = SWIG_NewPointerObj(SWIG_as_voidptr(new shared_ptr<XdmfDomain>(domain)), SWIGTYPE_p_boost__shared_ptrT_XdmfDomain_t, SWIG_POINTER_OWN);
}
else if(shared_ptr<XdmfGeometry> geometry = shared_dynamic_cast<XdmfGeometry>(obj)) {
result = SWIG_NewPointerObj(SWIG_as_voidptr(new shared_ptr<XdmfGeometry>(geometry)), SWIGTYPE_p_boost__shared_ptrT_XdmfGeometry_t, SWIG_POINTER_OWN);
}
else if(shared_ptr<XdmfGraph> graph = shared_dynamic_cast<XdmfGraph>(obj)) {
result = SWIG_NewPointerObj(SWIG_as_voidptr(new shared_ptr<XdmfGraph>(graph)), SWIGTYPE_p_boost__shared_ptrT_XdmfGraph_t, SWIG_POINTER_OWN);
}
else if(shared_ptr<XdmfGridCollection> gridCollection = shared_dynamic_cast<XdmfGridCollection>(obj)) {
result = SWIG_NewPointerObj(SWIG_as_voidptr(new shared_ptr<XdmfGridCollection>(gridCollection)), SWIGTYPE_p_boost__shared_ptrT_XdmfGridCollection_t, SWIG_POINTER_OWN);
}
else if(shared_ptr<XdmfInformation> information = shared_dynamic_cast<XdmfInformation>(obj)) {
result = SWIG_NewPointerObj(SWIG_as_voidptr(new shared_ptr<XdmfInformation>(information)), SWIGTYPE_p_boost__shared_ptrT_XdmfInformation_t, SWIG_POINTER_OWN);
}
else if(shared_ptr<XdmfMap> map = shared_dynamic_cast<XdmfMap>(obj)) {
result = SWIG_NewPointerObj(SWIG_as_voidptr(new shared_ptr<XdmfMap>(map)), SWIGTYPE_p_boost__shared_ptrT_XdmfMap_t, SWIG_POINTER_OWN);
}
else if(shared_ptr<XdmfRectilinearGrid> gridRectilinear = shared_dynamic_cast<XdmfRectilinearGrid>(obj)) {
result = SWIG_NewPointerObj(SWIG_as_voidptr(new shared_ptr<XdmfRectilinearGrid>(gridRectilinear)), SWIGTYPE_p_boost__shared_ptrT_XdmfRectilinearGrid_t, SWIG_POINTER_OWN);
}
else if(shared_ptr<XdmfRegularGrid> gridRegular = shared_dynamic_cast<XdmfRegularGrid>(obj)) {
result = SWIG_NewPointerObj(SWIG_as_voidptr(new shared_ptr<XdmfRegularGrid>(gridRegular)), SWIGTYPE_p_boost__shared_ptrT_XdmfRegularGrid_t, SWIG_POINTER_OWN);
}
else if(shared_ptr<XdmfSet> set = shared_dynamic_cast<XdmfSet>(obj)) {
result = SWIG_NewPointerObj(SWIG_as_voidptr(new shared_ptr<XdmfSet>(set)), SWIGTYPE_p_boost__shared_ptrT_XdmfSet_t, SWIG_POINTER_OWN);
}
else if(shared_ptr<XdmfTime> time = shared_dynamic_cast<XdmfTime>(obj)) {
result = SWIG_NewPointerObj(SWIG_as_voidptr(new shared_ptr<XdmfTime>(time)), SWIGTYPE_p_boost__shared_ptrT_XdmfTime_t, SWIG_POINTER_OWN);
}
else if(shared_ptr<XdmfTopology> topology = shared_dynamic_cast<XdmfTopology>(obj)) {
result = SWIG_NewPointerObj(SWIG_as_voidptr(new shared_ptr<XdmfTopology>(topology)), SWIGTYPE_p_boost__shared_ptrT_XdmfTopology_t, SWIG_POINTER_OWN);
}
else if(shared_ptr<XdmfUnstructuredGrid> gridUnstructured = shared_dynamic_cast<XdmfUnstructuredGrid>(obj)) {
result = SWIG_NewPointerObj(SWIG_as_voidptr(new shared_ptr<XdmfUnstructuredGrid>(gridUnstructured)), SWIGTYPE_p_boost__shared_ptrT_XdmfUnstructuredGrid_t, SWIG_POINTER_OWN);
}
else {
result = SWIG_NewPointerObj(SWIG_as_voidptr(new shared_ptr<XdmfItem>(obj)), SWIGTYPE_p_boost__shared_ptrT_XdmfItem_t, SWIG_POINTER_OWN);
}
return result;
}
}
%typemap(out, fragment="XdmfItemCast") shared_ptr<XdmfItem> {
$result = XdmfItemCast($1);
}
%typemap(out, fragment="XdmfItemCast") std::vector<shared_ptr<XdmfItem> > {
$result = PyList_New($1.size());
for(std::vector<shared_ptr<XdmfItem> >::size_type i = 0; i < $1.size(); ++i) {
PyList_SetItem($result, i, XdmfItemCast($1[i]));
}
}
%extend XdmfAttributeCenter {
bool __eq__(const XdmfAttributeCenter * attributeCenter) {
return $self == attributeCenter;
......
core/XdmfHDF5Writer.cpp
View file @ 25380d0d
......@@ -36,7 +36,7 @@
namespace {
const static unsigned int DEFAULT_CHUNK_SIZE = 0;
const static unsigned int DEFAULT_CHUNK_SIZE = 1000;
}
......@@ -75,7 +75,8 @@ public:
int
openFile(const std::string & filePath,
const int fapl)
const int fapl,
const int mDataSetId)
{
if(mHDF5Handle >= 0) {
// Perhaps we should throw a warning.
......@@ -96,10 +97,15 @@ public:
mHDF5Handle = H5Fopen(filePath.c_str(),
H5F_ACC_RDWR,
fapl);
hsize_t numObjects;
/*herr_t status = */H5Gget_num_objs(mHDF5Handle,
&numObjects);
toReturn = numObjects;
if(mDataSetId == 0) {
hsize_t numObjects;
/*herr_t status = */H5Gget_num_objs(mHDF5Handle,
&numObjects);
toReturn = numObjects;
}
else {
toReturn = mDataSetId;
}
}
else {
//this is where it currently fails
......@@ -231,7 +237,8 @@ void
XdmfHDF5Writer::openFile(const int fapl)
{
mDataSetId = mImpl->openFile(mFilePath,
fapl);
fapl,
mDataSetId);
}
void
......
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