made some fixes to the documentation

core/XdmfDSMBuffer.hpp

@@ -128,7 +128,7 @@ public:
    *
    * Python
    *
-   * @dontinclude XdmfExampleDSMNoThread.cpp
+   * @dontinclude XdmfExampleDSMNoThread.py
    * @skipline total
    * @until exampleWriter
    * @skipline if
@@ -203,7 +203,7 @@ public:
    *
    * Python
    *
-   * @dontinclude XdmfExampleDSMNoThread.cpp
+   * @dontinclude XdmfExampleDSMNoThread.py
    * @skipline total
    * @until exampleWriter
    * @skipline if
@@ -250,7 +250,7 @@ public:
    *
    * Python
    *
-   * @dontinclude XdmfExampleDSMNoThread.cpp
+   * @dontinclude XdmfExampleDSMNoThread.py
    * @skipline total
    * @until exampleWriter
    * @skipline if
@@ -288,7 +288,7 @@ public:
    *
    * Python
    *
-   * @dontinclude XdmfExampleDSMNoThread.cpp
+   * @dontinclude XdmfExampleDSMNoThread.py
    * @skipline total
    * @until exampleWriter
    * @skipline if
@@ -401,7 +401,7 @@ public:
    *
    * Python
    *
-   * @dontinclude XdmfExampleDSMNoThread.cpp
+   * @dontinclude XdmfExampleDSMNoThread.py
    * @skipline total
    * @until exampleWriter
    * @skipline if
@@ -434,7 +434,7 @@ public:
    *
    * Python
    *
-   * @dontinclude XdmfExampleDSMNoThread.cpp
+   * @dontinclude XdmfExampleDSMNoThread.py
    * @skipline total
    * @until exampleWriter
    * @skipline if
@@ -467,7 +467,7 @@ public:
    *
    * Python
    *
-   * @dontinclude XdmfExampleDSMNoThread.cpp
+   * @dontinclude XdmfExampleDSMNoThread.py
    * @skipline total
    * @until exampleWriter
    * @skipline if
@@ -500,7 +500,7 @@ public:
    *
    * Python
    *
-   * @dontinclude XdmfExampleDSMNoThread.cpp
+   * @dontinclude XdmfExampleDSMNoThread.py
    * @skipline total
    * @until exampleWriter
    * @skipline if
@@ -533,7 +533,7 @@ public:
    *
    * Python
    *
-   * @dontinclude XdmfExampleDSMNoThread.cpp
+   * @dontinclude XdmfExampleDSMNoThread.py
    * @skipline total
    * @until exampleWriter
    * @skipline if
@@ -566,7 +566,7 @@ public:
    *
    * Python
    *
-   * @dontinclude XdmfExampleDSMNoThread.cpp
+   * @dontinclude XdmfExampleDSMNoThread.py
    * @skipline total
    * @until exampleWriter
    * @skipline if
@@ -599,7 +599,7 @@ public:
    *
    * Python
    *
-   * @dontinclude XdmfExampleDSMNoThread.cpp
+   * @dontinclude XdmfExampleDSMNoThread.py
    * @skipline total
    * @until exampleWriter
    * @skipline if
@@ -632,7 +632,7 @@ public:
    *
    * Python
    *
-   * @dontinclude XdmfExampleDSMNoThread.cpp
+   * @dontinclude XdmfExampleDSMNoThread.py
    * @skipline total
    * @until exampleWriter
    * @skipline if
@@ -665,7 +665,7 @@ public:
    *
    * Python
    *
-   * @dontinclude XdmfExampleDSMNoThread.cpp
+   * @dontinclude XdmfExampleDSMNoThread.py
    * @skipline total
    * @until exampleWriter
    * @skipline if
@@ -698,7 +698,7 @@ public:
    *
    * Python
    *
-   * @dontinclude XdmfExampleDSMNoThread.cpp
+   * @dontinclude XdmfExampleDSMNoThread.py
    * @skipline total
    * @until exampleWriter
    * @skipline if
@@ -731,7 +731,7 @@ public:
    *
    * Python
    *
-   * @dontinclude XdmfExampleDSMNoThread.cpp
+   * @dontinclude XdmfExampleDSMNoThread.py
    * @skipline total
    * @until exampleWriter
    * @skipline if
@@ -764,7 +764,7 @@ public:
    *
    * Python
    *
-   * @dontinclude XdmfExampleDSMNoThread.cpp
+   * @dontinclude XdmfExampleDSMNoThread.py
    * @skipline total
    * @until exampleWriter
    * @skipline if
@@ -954,6 +954,7 @@ public:
    * @param       source          The core data will be recieved from
    * @param       data            The pointer where the recieved data will be stored
    * @param       aLength         The length of the data transmitted
+   * @param       tag             The communication tag to be used for the transmission
    * @param       aAddress        The location where the data will be written on the data buffer
    * @param       comm            The comunicator over which the data transfer will occur
    */
@@ -989,7 +990,7 @@ public:
    *
    * Python
    *
-   * @dontinclude XdmfExampleDSMNoThread.cpp
+   * @dontinclude XdmfExampleDSMNoThread.py
    * @skipline total
    * @until exampleWriter
    * @skipline if
@@ -1026,7 +1027,7 @@ public:
    *
    * Python
    *
-   * @dontinclude XdmfExampleDSMNoThread.cpp
+   * @dontinclude XdmfExampleDSMNoThread.py
    * @skipline total
    * @until exampleWriter
    * @skipline if
@@ -1068,7 +1069,7 @@ public:
    *
    * Python
    *
-   * @dontinclude XdmfExampleDSMNoThread.cpp
+   * @dontinclude XdmfExampleDSMNoThread.py
    * @skipline total
    * @until exampleWriter
    * @skipline if
@@ -1111,7 +1112,7 @@ public:
    *
    * Python
    *
-   * @dontinclude XdmfExampleDSMNoThread.cpp
+   * @dontinclude XdmfExampleDSMNoThread.py
    * @skipline total
    * @until exampleWriter
    * @skipline if
@@ -1123,6 +1124,7 @@ public:
    * @param       dest            The core that the data will be sent to
    * @param       data            A pointer to the location of the data being sent
    * @param       aLength         The length of the data being sent
+   * @param       tag             The communication tag to be used for the transmission
    * @param       aAddress        The address on the recieveing core's buffer that the data is to be placed in
    * @param       comm            The communicator over which the data transfer will take place
    */
@@ -1148,7 +1150,7 @@ public:
    *
    * Python
    *
-   * @dontinclude XdmfExampleDSMNoThread.cpp
+   * @dontinclude XdmfExampleDSMNoThread.py
    * @skipline total
    * @until exampleWriter
    * @skipline Section
@@ -1189,7 +1191,7 @@ public:
    *
    * Python
    *
-   * @dontinclude XdmfExampleDSMNoThread.cpp
+   * @dontinclude XdmfExampleDSMNoThread.py
    * @skipline total
    * @until exampleWriter
    * @skipline if
@@ -1222,7 +1224,7 @@ public:
    *
    * Python
    *
-   * @dontinclude XdmfExampleDSMNoThread.cpp
+   * @dontinclude XdmfExampleDSMNoThread.py
    * @skipline total
    * @until exampleWriter
    * @skipline if
@@ -1255,7 +1257,7 @@ public:
    *
    * Python
    *
-   * @dontinclude XdmfExampleDSMNoThread.cpp
+   * @dontinclude XdmfExampleDSMNoThread.py
    * @skipline total
    * @until exampleWriter
    * @skipline if
@@ -1289,7 +1291,7 @@ public:
    *
    * Python
    *
-   * @dontinclude XdmfExampleDSMNoThread.cpp
+   * @dontinclude XdmfExampleDSMNoThread.py
    * @skipline total
    * @until exampleWriter
    * @skipline if
@@ -1323,7 +1325,7 @@ public:
    *
    * Python
    *
-   * @dontinclude XdmfExampleDSMNoThread.cpp
+   * @dontinclude XdmfExampleDSMNoThread.py
    * @skipline total
    * @until exampleWriter
    * @skipline if
@@ -1357,7 +1359,7 @@ public:
    *
    * Python
    *
-   * @dontinclude XdmfExampleDSMNoThread.cpp
+   * @dontinclude XdmfExampleDSMNoThread.py
    * @skipline total
    * @until exampleWriter
    * @skipline if

core/XdmfDSMCommMPI.hpp

@@ -82,7 +82,7 @@ public:
    *
    * Python
    *
-   * @dontinclude XdmfExampleDSMNoThread.cpp
+   * @dontinclude XdmfExampleDSMNoThread.py
    * @skipline total
    * @until exampleWriter
    * @skipline if
@@ -121,7 +121,7 @@ public:
    *
    * Python
    *
-   * @dontinclude XdmfExampleDSMNoThread.cpp
+   * @dontinclude XdmfExampleDSMNoThread.py
    * @skipline total
    * @until exampleWriter
    * @skipline if
@@ -160,7 +160,7 @@ public:
    *
    * Python
    *
-   * @dontinclude XdmfExampleDSMNoThread.cpp
+   * @dontinclude XdmfExampleDSMNoThread.py
    * @skipline total
    * @until exampleWriter
    * @skipline if
@@ -202,7 +202,7 @@ public:
    *
    * Python
    *
-   * @dontinclude XdmfExampleDSMNoThread.cpp
+   * @dontinclude XdmfExampleDSMNoThread.py
    * @skipline total
    * @until exampleWriter
    * @skipline if
@@ -239,7 +239,7 @@ public:
    *
    * Python
    *
-   * @dontinclude XdmfExampleDSMNoThread.cpp
+   * @dontinclude XdmfExampleDSMNoThread.py
    * @skipline total
    * @until exampleWriter
    * @skipline if
@@ -275,7 +275,7 @@ public:
    *
    * Python
    *
-   * @dontinclude XdmfExampleDSMNoThread.cpp
+   * @dontinclude XdmfExampleDSMNoThread.py
    * @skipline total
    * @until exampleWriter
    * @skipline Section
@@ -314,7 +314,7 @@ public:
    *
    * Python
    *
-   * @dontinclude XdmfExampleDSMNoThread.cpp
+   * @dontinclude XdmfExampleDSMNoThread.py
    * @skipline total
    * @until exampleWriter
    * @skipline if
@@ -350,7 +350,7 @@ public:
    *
    * Python
    *
-   * @dontinclude XdmfExampleDSMNoThread.cpp
+   * @dontinclude XdmfExampleDSMNoThread.py
    * @skipline total
    * @until exampleWriter
    * @skipline if
@@ -385,7 +385,7 @@ public:
    *
    * Python
    *
-   * @dontinclude XdmfExampleDSMNoThread.cpp
+   * @dontinclude XdmfExampleDSMNoThread.py
    * @skipline total
    * @until exampleWriter
    * @skipline Section
@@ -419,7 +419,7 @@ public:
    *
    * Python
    *
-   * @dontinclude XdmfExampleDSMNoThread.cpp
+   * @dontinclude XdmfExampleDSMNoThread.py
    * @skipline total
    * @until exampleWriter
    * @skipline if
@@ -454,7 +454,7 @@ public:
    *
    * Python
    *
-   * @dontinclude XdmfExampleDSMNoThread.cpp
+   * @dontinclude XdmfExampleDSMNoThread.py
    * @skipline total
    * @until exampleWriter
    * @skipline if
@@ -489,7 +489,7 @@ public:
    *
    * Python
    *
-   * @dontinclude XdmfExampleDSMNoThread.cpp
+   * @dontinclude XdmfExampleDSMNoThread.py
    * @skipline total
    * @until exampleWriter
    * @skipline if
@@ -524,7 +524,7 @@ public:
    *
    * Python
    *
-   * @dontinclude XdmfExampleDSMNoThread.cpp
+   * @dontinclude XdmfExampleDSMNoThread.py
    * @skipline total
    * @until exampleWriter
    * @skipline if
@@ -559,7 +559,7 @@ public:
    *
    * Python
    *
-   * @dontinclude XdmfExampleDSMNoThread.cpp
+   * @dontinclude XdmfExampleDSMNoThread.py
    * @skipline total
    * @until exampleWriter
    * @skipline if
@@ -597,7 +597,7 @@ public:
    *
    * Python
    *
-   * @dontinclude XdmfExampleDSMNoThread.cpp
+   * @dontinclude XdmfExampleDSMNoThread.py
    * @skipline total
    * @until exampleWriter
    * @skipline if
@@ -637,7 +637,7 @@ public:
    *
    * Python
    *
-   * @dontinclude XdmfExampleDSMNoThread.cpp
+   * @dontinclude XdmfExampleDSMNoThread.py
    * @skipline total
    * @until exampleWriter
    * @skipline if

core/XdmfDSMManager.hpp

@@ -104,7 +104,7 @@ public:
    *
    * Python
    *
-   * @dontinclude XdmfExampleDSMNoThread.cpp
+   * @dontinclude XdmfExampleDSMNoThread.py
    * @skipline total
    * @until exampleWriter
    * @skipline if
@@ -141,7 +141,7 @@ public:
    *
    * Python
    *
-   * @dontinclude XdmfExampleDSMNoThread.cpp
+   * @dontinclude XdmfExampleDSMNoThread.py
    * @skipline total
    * @until exampleWriter
    * @skipline if
@@ -174,7 +174,7 @@ public:
    *
    * Python
    *
-   * @dontinclude XdmfExampleDSMNoThread.cpp
+   * @dontinclude XdmfExampleDSMNoThread.py
    * @skipline total
    * @until exampleWriter
    * @skipline if
@@ -213,7 +213,7 @@ public:
    *
    * Python
    *
-   * @dontinclude XdmfExampleDSMNoThread.cpp
+   * @dontinclude XdmfExampleDSMNoThread.py
    * @skipline total
    * @until exampleWriter
    * @skipline if
@@ -249,7 +249,7 @@ public:
    *
    * Python
    *
-   * @dontinclude XdmfExampleDSMNoThread.cpp
+   * @dontinclude XdmfExampleDSMNoThread.py
    * @skipline total
    * @until exampleWriter
    * @skipline if
@@ -282,7 +282,7 @@ public:
    *
    * Python
    *
-   * @dontinclude XdmfExampleDSMNoThread.cpp
+   * @dontinclude XdmfExampleDSMNoThread.py
    * @skipline total
    * @until exampleWriter
    * @skipline if
@@ -315,7 +315,7 @@ public:
    *
    * Python
    *
-   * @dontinclude XdmfExampleDSMNoThread.cpp
+   * @dontinclude XdmfExampleDSMNoThread.py
    * @skipline total
    * @until exampleWriter
    * @skipline if
@@ -347,7 +347,7 @@ public:
    *
    * Python
    *
-   * @dontinclude XdmfExampleDSMNoThread.cpp
+   * @dontinclude XdmfExampleDSMNoThread.py
    * @skipline total
    * @until exampleWriter
    * @skipline if
@@ -379,7 +379,7 @@ public:
    *
    * Python
    *
-   * @dontinclude XdmfExampleDSMNoThread.cpp
+   * @dontinclude XdmfExampleDSMNoThread.py
    * @skipline total
    * @until exampleWriter
    * @skipline if
@@ -411,7 +411,7 @@ public:
    *
    * Python
    *
-   * @dontinclude XdmfExampleDSMNoThread.cpp
+   * @dontinclude XdmfExampleDSMNoThread.py
    * @skipline total
    * @until exampleWriter
    * @skipline if
@@ -443,7 +443,7 @@ public:
    *
    * Python
    *
-   * @dontinclude XdmfExampleDSMNoThread.cpp
+   * @dontinclude XdmfExampleDSMNoThread.py
    * @skipline total
    * @until exampleWriter
    * @skipline if
@@ -475,7 +475,7 @@ public:
    *
    * Python
    *
-   * @dontinclude XdmfExampleDSMNoThread.cpp
+   * @dontinclude XdmfExampleDSMNoThread.py
    * @skipline total
    * @until exampleWriter
    * @skipline if
@@ -507,7 +507,7 @@ public:
    *
    * Python
    *
-   * @dontinclude XdmfExampleDSMNoThread.cpp
+   * @dontinclude XdmfExampleDSMNoThread.py
    * @skipline total
    * @until exampleWriter
    * @skipline if
@@ -539,7 +539,7 @@ public:
    *
    * Python
    *
-   * @dontinclude XdmfExampleDSMNoThread.cpp
+   * @dontinclude XdmfExampleDSMNoThread.py
    * @skipline total
    * @until exampleWriter
    * @skipline if
@@ -573,7 +573,7 @@ public:
    *
    * Python
    *
-   * @dontinclude XdmfExampleDSMNoThread.cpp
+   * @dontinclude XdmfExampleDSMNoThread.py
    * @skipline total
    * @until exampleWriter
    * @skipline if
@@ -608,7 +608,7 @@ public:
    *
    * Python
    *
-   * @dontinclude XdmfExampleDSMNoThread.cpp
+   * @dontinclude XdmfExampleDSMNoThread.py
    * @skipline total
    * @until exampleWriter
    * @skipline if
@@ -641,7 +641,7 @@ public:
    *
    * Python
    *
-   * @dontinclude XdmfExampleDSMNoThread.cpp
+   * @dontinclude XdmfExampleDSMNoThread.py
    * @skipline total
    * @until exampleWriter
    * @skipline if
@@ -675,7 +675,7 @@ public:
    *
    * Python
    *
-   * @dontinclude XdmfExampleDSMNoThread.cpp
+   * @dontinclude XdmfExampleDSMNoThread.py
    * @skipline total
    * @until exampleWriter
    * @skipline if
@@ -708,7 +708,7 @@ public:
    *
    * Python
    *
-   * @dontinclude XdmfExampleDSMNoThread.cpp
+   * @dontinclude XdmfExampleDSMNoThread.py
    * @skipline total
    * @until exampleWriter
    * @skipline if
@@ -743,7 +743,7 @@ public:
    *
    * Python
    *
-   * @dontinclude XdmfExampleDSMNoThread.cpp
+   * @dontinclude XdmfExampleDSMNoThread.py
    * @skipline total
    * @until exampleWriter
    * @skipline if
@@ -777,7 +777,7 @@ public:
    *
    * Python
    *
-   * @dontinclude XdmfExampleDSMNoThread.cpp
+   * @dontinclude XdmfExampleDSMNoThread.py
    * @skipline total
    * @until exampleWriter
    * @skipline if

core/XdmfHDF5ControllerDSM.hpp

@@ -201,7 +201,7 @@ public:
    *
    * Python
    *
-   * @dontinclude XdmfExampleDSMNoThread.cpp
+   * @dontinclude XdmfExampleDSMNoThread.py
    * @skipline total
    * @until exampleWriter
    * @skipline if
@@ -226,7 +226,7 @@ public:
       const std::vector<unsigned int> & start,
       const std::vector<unsigned int> & stride,
       const std::vector<unsigned int> & dimensions,
-      const std::vector<unsigned int> & datspaceDimensions,
+      const std::vector<unsigned int> & dataspaceDimensions,
       XdmfDSMBuffer * const dsmBuffer,
       int startCoreIndex,
       int endCoreIndex);
@@ -246,7 +246,7 @@ public:
    *
    * Python
    *
-   * @dontinclude XdmfExampleDSMNoThread.cpp
+   * @dontinclude XdmfExampleDSMNoThread.py
    * @skipline total
    * @until workerComm
    * @skipline exampleController
@@ -272,7 +272,7 @@ public:
       const std::vector<unsigned int> & start,
       const std::vector<unsigned int> & stride,
       const std::vector<unsigned int> & dimensions,
-      const std::vector<unsigned int> & datspaceDimensions,
+      const std::vector<unsigned int> & dataspaceDimensions,
       MPI_Comm comm,
       unsigned int bufferSize,
       int startCoreIndex,
@@ -402,7 +402,7 @@ public:
    *
    * Python
    *
-   * @dontinclude XdmfExampleDSMNoThread.cpp
+   * @dontinclude XdmfExampleDSMNoThread.py
    * @skipline total
    * @until workerComm
    * @skipline exampleController
@@ -436,7 +436,7 @@ public:
    *
    * Python
    *
-   * @dontinclude XdmfExampleDSMNoThread.cpp
+   * @dontinclude XdmfExampleDSMNoThread.py
    * @skipline total
    * @until workerComm
    * @skipline exampleController
@@ -469,7 +469,7 @@ public:
    *
    * Python
    *
-   * @dontinclude XdmfExampleDSMNoThread.cpp
+   * @dontinclude XdmfExampleDSMNoThread.py
    * @skipline total
    * @until workerComm
    * @skipline exampleController
@@ -504,7 +504,7 @@ public:
    *
    * Python
    *
-   * @dontinclude XdmfExampleDSMNoThread.cpp
+   * @dontinclude XdmfExampleDSMNoThread.py
    * @skipline total
    * @until exampleWriter
    * @skipline if
@@ -538,7 +538,7 @@ public:
    *
    * Python
    *
-   * @dontinclude XdmfExampleDSMNoThread.cpp
+   * @dontinclude XdmfExampleDSMNoThread.py
    * @skipline total
    * @until workerComm
    * @skipline exampleController
@@ -612,7 +612,7 @@ public:
    *
    * Python
    *
-   * @dontinclude XdmfExampleDSMNoThread.cpp
+   * @dontinclude XdmfExampleDSMNoThread.py
    * @skipline total
    * @until workerComm
    * @skipline exampleController
@@ -689,7 +689,7 @@ public:
    *
    * Python
    *
-   * @dontinclude XdmfExampleDSMNoThread.cpp
+   * @dontinclude XdmfExampleDSMNoThread.py
    * @skipline total
    * @until workerComm
    * @skipline exampleController
@@ -724,7 +724,7 @@ public:
    *
    * Python
    *
-   * @dontinclude XdmfExampleDSMNoThread.cpp
+   * @dontinclude XdmfExampleDSMNoThread.py
    * @skipline total
    * @until workerComm
    * @skipline exampleController
@@ -759,7 +759,7 @@ public:
    *
    * Python
    *
-   * @dontinclude XdmfExampleDSMNoThread.cpp
+   * @dontinclude XdmfExampleDSMNoThread.py
    * @skipline total
    * @until exampleWriter
    * @skipline if
@@ -792,7 +792,7 @@ public:
    *
    * Python
    *
-   * @dontinclude XdmfExampleDSMNoThread.cpp