IOSS  2.0
Iopg_DatabaseIO.h
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32 
33 #ifndef IOSS_Iopg_DatabaseIO_h
34 #define IOSS_Iopg_DatabaseIO_h
35 
36 #include "Ioss_State.h" // for State
37 #include <Ioss_CodeTypes.h>
38 #include <Ioss_DBUsage.h> // for DatabaseUsage
39 #include <Ioss_DatabaseIO.h> // for DatabaseIO
40 #include <Ioss_IOFactory.h> // for IOFactory
41 #include <Ioss_Map.h> // for Map
42 #include <stddef.h> // for size_t
43 #include <stdint.h> // for int64_t
44 #include <string> // for string
45 #include <vector> // for vector
46 
47 namespace Ioss {
48  class CommSet;
49  class EdgeBlock;
50  class EdgeSet;
51  class ElementBlock;
52  class ElementSet;
53  class EntityBlock;
54  class FaceBlock;
55  class FaceSet;
56  class Field;
57  class GroupingEntity;
58  class NodeBlock;
59  class NodeSet;
60  class PropertyManager;
61  class Region;
62  class SideBlock;
63  class SideSet;
64  class StructuredBlock;
65 } // namespace Ioss
66 
67 /** \brief A namespace for the pamgen database format.
68  */
69 namespace Iopg {
70  class IOFactory : public Ioss::IOFactory
71  {
72  public:
73  static const IOFactory *factory();
74 
75  private:
76  IOFactory();
77  Ioss::DatabaseIO *make_IO(const std::string &filename, Ioss::DatabaseUsage db_usage,
78  MPI_Comm communicator, const Ioss::PropertyManager &properties) const;
79  };
80 
82  {
83  public:
84  DatabaseIO(Ioss::Region *region, const std::string &filename, Ioss::DatabaseUsage db_usage,
85  MPI_Comm communicator, const Ioss::PropertyManager &properties);
86  DatabaseIO(const DatabaseIO &from) = delete;
87  DatabaseIO &operator=(const DatabaseIO &from) = delete;
88  ~DatabaseIO();
89 
90  // Check capabilities of input/output database... Returns an
91  // unsigned int with the supported Ioss::EntityTypes or'ed
92  // together. If "return_value & Ioss::EntityType" is set, then the
93  // database supports that type (e.g. return_value & Ioss::FACESET)
94  unsigned entity_field_support() const override
95  {
97  }
98 
99  int int_byte_size_db() const override { return 4; }
100 
101  std::string title() const { return databaseTitle; }
102  int maximum_symbol_length() const override { return 32; }
103 
105  std::vector<std::string> &block_membership) const;
106 
107  private:
108  void read_meta_data__() override;
109 
110  bool begin__(Ioss::State state) override;
111  bool end__(Ioss::State state) override;
112 
113  void read_region();
115 
116  void get_nodeblocks();
117  void get_elemblocks();
118  void get_nodesets();
119  void get_sidesets();
120  void get_commsets();
121 
122  int get_side_connectivity(const Ioss::SideBlock *fb, int id, int side_count, int *fconnect,
123  size_t data_size) const;
124  int get_side_distributions(const Ioss::SideBlock *fb, int id, int side_count, double *dist_fact,
125  size_t data_size) const;
126 
127  const Ioss::Map &get_node_map() const;
128  const Ioss::Map &get_element_map() const;
129 
130  int64_t get_field_internal(const Ioss::Region *reg, const Ioss::Field &field, void *data,
131  size_t data_size) const override;
132  int64_t get_field_internal(const Ioss::NodeBlock *nb, const Ioss::Field &field, void *data,
133  size_t data_size) const override;
134  int64_t get_field_internal(const Ioss::EdgeBlock *nb, const Ioss::Field &field, void *data,
135  size_t data_size) const override
136  {
137  return 0;
138  }
139  int64_t get_field_internal(const Ioss::FaceBlock *nb, const Ioss::Field &field, void *data,
140  size_t data_size) const override
141  {
142  return 0;
143  }
144  int64_t get_field_internal(const Ioss::ElementBlock *eb, const Ioss::Field &field, void *data,
145  size_t data_size) const override;
146  int64_t get_field_internal(const Ioss::SideBlock *fb, const Ioss::Field &field, void *data,
147  size_t data_size) const override;
148  int64_t get_field_internal(const Ioss::NodeSet *ns, const Ioss::Field &field, void *data,
149  size_t data_size) const override;
150  int64_t get_field_internal(const Ioss::EdgeSet *ns, const Ioss::Field &field, void *data,
151  size_t data_size) const override
152  {
153  return 0;
154  }
155  int64_t get_field_internal(const Ioss::FaceSet *ns, const Ioss::Field &field, void *data,
156  size_t data_size) const override
157  {
158  return 0;
159  }
160  int64_t get_field_internal(const Ioss::ElementSet *ns, const Ioss::Field &field, void *data,
161  size_t data_size) const override
162  {
163  return 0;
164  }
165  int64_t get_field_internal(const Ioss::SideSet *fs, const Ioss::Field &field, void *data,
166  size_t data_size) const override;
167  int64_t get_field_internal(const Ioss::CommSet *cs, const Ioss::Field &field, void *data,
168  size_t data_size) const override;
169 
170  int64_t get_field_internal(const Ioss::StructuredBlock *sb, const Ioss::Field &field,
171  void *data, size_t data_size) const override
172  {
173  return 0;
174  }
175 
176  int64_t put_field_internal(const Ioss::Region *reg, const Ioss::Field &field, void *data,
177  size_t data_size) const override;
178  int64_t put_field_internal(const Ioss::NodeBlock *nb, const Ioss::Field &field, void *data,
179  size_t data_size) const override;
180  int64_t put_field_internal(const Ioss::EdgeBlock *nb, const Ioss::Field &field, void *data,
181  size_t data_size) const override
182  {
183  return 0;
184  }
185  int64_t put_field_internal(const Ioss::FaceBlock *nb, const Ioss::Field &field, void *data,
186  size_t data_size) const override
187  {
188  return 0;
189  }
190  int64_t put_field_internal(const Ioss::ElementBlock *eb, const Ioss::Field &field, void *data,
191  size_t data_size) const override;
192  int64_t put_field_internal(const Ioss::SideBlock *fb, const Ioss::Field &field, void *data,
193  size_t data_size) const override;
194  int64_t put_field_internal(const Ioss::NodeSet *ns, const Ioss::Field &field, void *data,
195  size_t data_size) const override;
196  int64_t put_field_internal(const Ioss::EdgeSet *ns, const Ioss::Field &field, void *data,
197  size_t data_size) const override
198  {
199  return 0;
200  }
201  int64_t put_field_internal(const Ioss::FaceSet *ns, const Ioss::Field &field, void *data,
202  size_t data_size) const override
203  {
204  return 0;
205  }
206  int64_t put_field_internal(const Ioss::ElementSet *ns, const Ioss::Field &field, void *data,
207  size_t data_size) const override
208  {
209  return 0;
210  }
211  int64_t put_field_internal(const Ioss::SideSet *fs, const Ioss::Field &field, void *data,
212  size_t data_size) const override;
213  int64_t put_field_internal(const Ioss::CommSet *cs, const Ioss::Field &field, void *data,
214  size_t data_size) const override;
215  int64_t put_field_internal(const Ioss::StructuredBlock *sb, const Ioss::Field &field,
216  void *data, size_t data_size) const override
217  {
218  return 0;
219  }
220 
221  std::string databaseTitle;
222 
224 
227  int nodesetCount{0};
228  int sidesetCount{0};
229 
230  // Communication Set Data
237  };
238 } // namespace Iopg
239 #endif // IOSS_Iopg_DatabaseIO_h
Definition: Ioss_EntityType.h:52
std::string title() const
Definition: Iopg_DatabaseIO.h:101
A namespace for the pamgen database format.
Definition: Iopg_DatabaseIO.C:58
Definition: Ioss_EntityType.h:48
int64_t get_field_internal(const Ioss::StructuredBlock *sb, const Ioss::Field &field, void *data, size_t data_size) const override
Definition: Iopg_DatabaseIO.h:170
int64_t get_field_internal(const Ioss::ElementSet *ns, const Ioss::Field &field, void *data, size_t data_size) const override
Definition: Iopg_DatabaseIO.h:160
void compute_block_membership(Ioss::SideBlock *efblock, std::vector< std::string > &block_membership) const
Definition: Iopg_DatabaseIO.C:1561
The main namespace for the Ioss library.
Definition: Ioad_DatabaseIO.C:66
const Ioss::Map & get_node_map() const
Definition: Iopg_DatabaseIO.C:1513
An input or output Database.
Definition: Ioss_DatabaseIO.h:82
int64_t get_field_internal(const Ioss::EdgeBlock *nb, const Ioss::Field &field, void *data, size_t data_size) const override
Definition: Iopg_DatabaseIO.h:134
void get_nodesets()
Definition: Iopg_DatabaseIO.C:573
int commsetElemCount
Definition: Iopg_DatabaseIO.h:236
A collection of nodes.
Definition: Ioss_NodeSet.h:53
A collection of element faces with the same topology.
Definition: Ioss_FaceBlock.h:53
A collection of element faces.
Definition: Ioss_FaceSet.h:54
Definition: Ioss_EntityType.h:43
bool end__(Ioss::State state) override
Definition: Iopg_DatabaseIO.C:967
int maximum_symbol_length() const override
Get the length of the longest name in the database file.
Definition: Iopg_DatabaseIO.h:102
IOFactory()
Definition: Iopg_DatabaseIO.C:115
A collection of element edges.
Definition: Ioss_EdgeSet.h:54
int nodesetCount
Definition: Iopg_DatabaseIO.h:227
int get_side_connectivity(const Ioss::SideBlock *fb, int id, int side_count, int *fconnect, size_t data_size) const
Definition: Iopg_DatabaseIO.C:1601
int64_t put_field_internal(const Ioss::StructuredBlock *sb, const Ioss::Field &field, void *data, size_t data_size) const override
Definition: Iopg_DatabaseIO.h:215
A collection of element sides having the same topology.
Definition: Ioss_SideBlock.h:61
int64_t put_field_internal(const Ioss::FaceBlock *nb, const Ioss::Field &field, void *data, size_t data_size) const override
Definition: Iopg_DatabaseIO.h:185
std::vector< int > IntVector
Definition: Ioss_CodeTypes.h:43
DatabaseIO & operator=(const DatabaseIO &from)=delete
int sidesetCount
Definition: Iopg_DatabaseIO.h:228
Ioss::IntVector nodeCmapIds
Definition: Iopg_DatabaseIO.h:231
int64_t put_field_internal(const Ioss::FaceSet *ns, const Ioss::Field &field, void *data, size_t data_size) const override
Definition: Iopg_DatabaseIO.h:201
void get_elemblocks()
Definition: Iopg_DatabaseIO.C:447
bool begin__(Ioss::State state) override
Definition: Iopg_DatabaseIO.C:965
State
Access states for a database.
Definition: Ioss_State.h:42
void get_sidesets()
Definition: Iopg_DatabaseIO.C:679
Ioss::IntVector elemCmapElemCnts
Definition: Iopg_DatabaseIO.h:234
The main public user interface for creating Ioss::DatabaseIO objects.
Definition: Ioss_IOFactory.h:58
int nodeBlockCount
Definition: Iopg_DatabaseIO.h:225
DatabaseIO()=delete
A collection of elements having the same topology.
Definition: Ioss_ElementBlock.h:48
Definition: Iopg_DatabaseIO.h:81
A structured zone – i,j,k.
Definition: Ioss_StructuredBlock.h:103
Ioss::PropertyManager properties
Definition: Ioss_DatabaseIO.h:574
A collection of elements.
Definition: Ioss_ElementSet.h:54
DatabaseUsage
Specifies how an Ioss::DatabaseIO object will be used.
Definition: Ioss_DBUsage.h:40
int spatialDimension
Definition: Iopg_DatabaseIO.h:223
int64_t put_field_internal(const Ioss::ElementSet *ns, const Ioss::Field &field, void *data, size_t data_size) const override
Definition: Iopg_DatabaseIO.h:206
const Ioss::Map & get_element_map() const
Definition: Iopg_DatabaseIO.C:1537
Ioss::IntVector nodeCmapNodeCnts
Definition: Iopg_DatabaseIO.h:232
void read_region()
Definition: Iopg_DatabaseIO.C:274
void read_communication_metadata()
Definition: Iopg_DatabaseIO.C:328
A collection of all nodes in the region.
Definition: Ioss_NodeBlock.h:53
static const IOFactory * factory()
Definition: Iopg_DatabaseIO.C:109
Definition: Iopg_DatabaseIO.h:70
Ioss::DatabaseIO * make_IO(const std::string &filename, Ioss::DatabaseUsage db_usage, MPI_Comm communicator, const Ioss::PropertyManager &properties) const
Definition: Iopg_DatabaseIO.C:117
int get_side_distributions(const Ioss::SideBlock *fb, int id, int side_count, double *dist_fact, size_t data_size) const
Definition: Iopg_DatabaseIO.C:1687
Definition: Ioss_EntityType.h:40
Definition: Ioss_Map.h:52
Definition: Ioss_CommSet.h:51
int64_t get_field_internal(const Ioss::FaceSet *ns, const Ioss::Field &field, void *data, size_t data_size) const override
Definition: Iopg_DatabaseIO.h:155
int64_t get_field_internal(const Ioss::Region *reg, const Ioss::Field &field, void *data, size_t data_size) const override
Definition: Iopg_DatabaseIO.C:1087
std::vector< char > data
Definition: cth_pressure_map.C:73
A grouping entity that contains other grouping entities.
Definition: Ioss_Region.h:98
void get_nodeblocks()
Definition: Iopg_DatabaseIO.C:434
void get_commsets()
Definition: Iopg_DatabaseIO.C:617
int64_t get_field_internal(const Ioss::FaceBlock *nb, const Ioss::Field &field, void *data, size_t data_size) const override
Definition: Iopg_DatabaseIO.h:139
~DatabaseIO()
Definition: Iopg_DatabaseIO.C:140
int64_t get_field_internal(const Ioss::EdgeSet *ns, const Ioss::Field &field, void *data, size_t data_size) const override
Definition: Iopg_DatabaseIO.h:150
A collection of element sides.
Definition: Ioss_SideSet.h:59
void read_meta_data__() override
Definition: Iopg_DatabaseIO.C:184
Holds metadata for bulk data associated with a GroupingEntity.
Definition: Ioss_Field.h:47
int64_t put_field_internal(const Ioss::Region *reg, const Ioss::Field &field, void *data, size_t data_size) const override
Definition: Iopg_DatabaseIO.C:1461
int MPI_Comm
Definition: Ioss_CodeTypes.h:88
Definition: Ioss_EntityType.h:44
Ioss::IntVector elemCmapIds
Definition: Iopg_DatabaseIO.h:233
std::string databaseTitle
Definition: Iopg_DatabaseIO.h:221
int commsetNodeCount
Definition: Iopg_DatabaseIO.h:235
A collection of Ioss::Property objects.
Definition: Ioss_PropertyManager.h:49
int int_byte_size_db() const override
Definition: Iopg_DatabaseIO.h:99
A collection of element edges with the same topology.
Definition: Ioss_EdgeBlock.h:53
int64_t put_field_internal(const Ioss::EdgeBlock *nb, const Ioss::Field &field, void *data, size_t data_size) const override
Definition: Iopg_DatabaseIO.h:180
int elementBlockCount
Definition: Iopg_DatabaseIO.h:226
int64_t put_field_internal(const Ioss::EdgeSet *ns, const Ioss::Field &field, void *data, size_t data_size) const override
Definition: Iopg_DatabaseIO.h:196
unsigned entity_field_support() const override
Definition: Iopg_DatabaseIO.h:94