IOSS 2.0

Iogn_DashSurfaceMesh.h
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32
33 #ifndef IOSS_Iogn_DashSurfaceMesh_h
34 #define IOSS_Iogn_DashSurfaceMesh_h
35
36 #include <Ioss_Beam2.h>
37 #include <Ioss_Hex8.h>
38 #include <Ioss_Shell4.h>
39 #include <cstddef> // for size_t
40 #include <cstdint> // for int64_t
41 #include <exception> // for exception
42 #include <generated/Iogn_GeneratedMesh.h> // for GeneratedMesh
43 #include <string> // for string
44 #include <utility> // for pair
45 #include <vector> // for vector
46
47 namespace Iogn {
48
49 enum { INVALID = -1, NUMBER_OF_SURFACES = 2, SPATIAL_DIMENSION = 3, NUM_NODES_PER_QUAD_FACE = 4 };
50
51 struct SharedNode
52 {
53 SharedNode() : nodeId(-1), procId(-1) {}
54 int nodeId;
55 int procId;
56 };
57
58 enum Topology { Beam2 = 2, Shell4 = 4, Hex8 = 8 };
59
60 inline std::string getTopologyName(Topology topology)
61 {
62 switch (topology) {
63 case Shell4: return std::string(Ioss::Shell4::name);
64 case Hex8: return std::string(Ioss::Hex8::name);
65 case Beam2: return std::string(Ioss::Beam2::name);
66 }
67 throw std::exception();
68 }
69
70 struct ExodusData
71 {
72 std::vector<double> coordinates;
73 const std::vector<std::vector<int>> elementBlockConnectivity;
74 const std::vector<int> globalNumberOfElementsInBlock;
75 const std::vector<int> localNumberOfElementsInBlock;
76 const std::vector<Topology> blockTopologicalData;
77
78 const int globalNumberOfNodes;
79
80 const std::vector<int> globalIdsOfLocalElements;
81 const std::vector<int> globalIdsOfLocalNodes;
82
83 std::vector<SharedNode> sharedNodes;
84
85 // A sideset' is basically an exodus sideset. A
86 // sideset has a list of elements and a corresponding local
87 // element side (1-based) The side id is: side_id =
88 // 10*element_id + local_side_number This assumes that all
89 // sides in a sideset are boundary sides.
90 std::vector<std::vector<int>> sidesetConnectivity;
91 std::vector<std::vector<std::string>> sidesetTouchingBlocks;
92
93 ExodusData() : globalNumberOfNodes(0) {}
94 ExodusData(const std::vector<double> coords,
95 const std::vector<std::vector<int>> elemBlockConnectivity,
96 const std::vector<int> globalNumOfElemsInBlock,
97 const std::vector<int> localNumOfElemsInBlock,
98 const std::vector<Topology> blockTopoData, int globalNumNodes,
99 const std::vector<int> globalIdsOfLocalElems,
100 const std::vector<int> globalIdsLocalNodes,
101 std::vector<std::vector<int>> sidesetConn = std::vector<std::vector<int>>(),
102 std::vector<std::vector<std::string>> sidesetBlocks =
103 std::vector<std::vector<std::string>>())
104 : coordinates(coords), elementBlockConnectivity(elemBlockConnectivity),
105 globalNumberOfElementsInBlock(globalNumOfElemsInBlock),
106 localNumberOfElementsInBlock(localNumOfElemsInBlock), blockTopologicalData(blockTopoData),
107 globalNumberOfNodes(globalNumNodes), globalIdsOfLocalElements(globalIdsOfLocalElems),
108 globalIdsOfLocalNodes(globalIdsLocalNodes), sidesetConnectivity(std::move(sidesetConn)),
109 sidesetTouchingBlocks(std::move(sidesetBlocks))
110 {
111 }
112 };
113
114 struct DashSurfaceData
115 {
116 const std::vector<double> coordinates;
117 const std::vector<int> surfaceAConnectivity;
118 const std::vector<int> surfaceBConnectivity;
119
120 int globalNumberOfNodes{};
121 int globalNumberOfElements{};
122
123 int globalNumberOfElementsSurface1{};
124 int globalNumberOfElementsSurface2{};
125
126 std::vector<int> globalIdsOfLocalElements;
127 std::vector<int> globalIdsOfLocalNodes;
128
129 std::vector<SharedNode> sharedNodes;
130
131 DashSurfaceData(const std::vector<double> &coords, const std::vector<int> &connectivity1,
132 const std::vector<int> &connectivity2)
133 : coordinates(coords), surfaceAConnectivity(connectivity1),
134 surfaceBConnectivity(connectivity2)
135 {
136 this->setSerialDefaults();
137 }
138
139 private:
140 void setSerialDefaults()
141 {
142 globalNumberOfNodes = coordinates.size() / SPATIAL_DIMENSION;
143
144 globalNumberOfElementsSurface1 = surfaceBConnectivity.size() / NUM_NODES_PER_QUAD_FACE;
145 globalNumberOfElementsSurface2 = surfaceAConnectivity.size() / NUM_NODES_PER_QUAD_FACE;
146 globalNumberOfElements = globalNumberOfElementsSurface1 + globalNumberOfElementsSurface2;
147
148 globalIdsOfLocalElements.resize(globalNumberOfElements);
149 globalIdsOfLocalNodes.resize(globalNumberOfNodes);
150
151 for (size_t i = 0; i < globalIdsOfLocalElements.size(); i++) {
152 globalIdsOfLocalElements[i] = i + 1;
153 }
154
155 for (size_t i = 0; i < globalIdsOfLocalNodes.size(); i++) {
156 globalIdsOfLocalNodes[i] = i + 1;
157 }
158 }
159 };
160
161 class DashSurfaceMesh : public GeneratedMesh
162 {
163 public:
164 explicit DashSurfaceMesh(DashSurfaceData &dashSurfaceData) : mDashSurfaceData(dashSurfaceData)
165 {
166 }
167
168 ~DashSurfaceMesh() override = default;
169
170 int64_t node_count() const override;
171 int64_t node_count_proc() const override;
172
173 int64_t element_count() const override;
174 int64_t element_count(int64_t surfaceNumber) const override;
175 int64_t element_count_proc() const override;
176 int64_t element_count_proc(int64_t block_number) const override;
177
178 int64_t block_count() const override;
179
180 int64_t nodeset_count() const override;
181 int64_t nodeset_node_count_proc(int64_t id) const override;
182
183 int64_t sideset_count() const override;
184 int64_t sideset_side_count_proc(int64_t id) const override;
185
186 int64_t communication_node_count_proc() const override;
187
188 void coordinates(double *coord) const override;
189 void coordinates(std::vector<double> &coord) const override;
190 void coordinates(int component, std::vector<double> &xyz) const override;
191 void coordinates(std::vector<double> &x, std::vector<double> &y,
192 std::vector<double> &z) const override;
193
194 void connectivity(int64_t block_number, int *connect) const override;
195
196 std::pair<std::string, int> topology_type(int64_t block_number) const override;
197
198 void sideset_elem_sides(int64_t setId, std::vector<int64_t> &elem_sides) const override;
199
200 void nodeset_nodes(int64_t nset_id, std::vector<int64_t> &nodes) const override;
201
202 void node_communication_map(std::vector<int64_t> &map, std::vector<int> &proc) override;
203
204 void node_map(std::vector<int> &map) const override;
205 void node_map(std::vector<int64_t> &map) const override;
206
207 void element_map(int64_t block_number, std::vector<int> &map) const override;
208 void element_map(int64_t block_number, std::vector<int64_t> &map) const override;
209 void element_map(std::vector<int64_t> &map) const override;
210 void element_map(std::vector<int> &map) const override;
211
212 private:
213 DashSurfaceData mDashSurfaceData;
214 };
215
216 class ExodusMesh : public GeneratedMesh
217 {
218 public:
219 explicit ExodusMesh(const ExodusData &exodusData);
220
221 ~ExodusMesh() override = default;
222
223 int64_t node_count() const override;
224 int64_t node_count_proc() const override;
225
226 int64_t element_count() const override;
227 int64_t element_count(int64_t blockNumber) const override;
228 int64_t element_count_proc() const override;
229 int64_t element_count_proc(int64_t blockNumber) const override;
230
231 int64_t block_count() const override;
232
233 int64_t nodeset_count() const override;
234 int64_t nodeset_node_count_proc(int64_t id) const override;
235
236 int64_t sideset_count() const override;
237 int64_t sideset_side_count_proc(int64_t id) const override;
238
239 int64_t communication_node_count_proc() const override;
240
241 void coordinates(double *coord) const override;
242 void coordinates(std::vector<double> &coord) const override;
243 void coordinates(int component, std::vector<double> &xyz) const override;
244 void coordinates(std::vector<double> &x, std::vector<double> &y,
245 std::vector<double> &z) const override;
246
247 void connectivity(int64_t blockNumber, int *connectivityForBlock) const override;
248
249 std::pair<std::string, int> topology_type(int64_t blockNumber) const override;
250
251 void sideset_elem_sides(int64_t setId, std::vector<int64_t> &elem_sides) const override;
252
253 std::vector<std::string> sideset_touching_blocks(int64_t setId) const override;
254
255 void nodeset_nodes(int64_t nset_id, std::vector<int64_t> &nodes) const override;
256
257 void node_communication_map(std::vector<int64_t> &map, std::vector<int> &proc) override;
258
259 void node_map(std::vector<int> &map) const override;
260 void node_map(std::vector<int64_t> &map) const override;
261
262 void element_map(int64_t blockNumber, std::vector<int> &map) const override;
263 void element_map(int64_t blockNumber, std::vector<int64_t> &map) const override;
264 void element_map(std::vector<int64_t> &map) const override;
265 void element_map(std::vector<int> &map) const override;
266
267 private:
268 int64_t mGlobalNumberOfElements;
269 int64_t mLocalNumberOfElements;
270
271 const ExodusData & mExodusData;
272 std::vector<int64_t> mElementOffsetForBlock;
273 };
274 } // namespace Iogn
275
276 #endif
Iogn::ExodusMesh::mGlobalNumberOfElements
int64_t mGlobalNumberOfElements
Definition: Iogn_DashSurfaceMesh.h:268
Iogn::ExodusData::ExodusData
ExodusData()
Definition: Iogn_DashSurfaceMesh.h:93
Iogn::DashSurfaceMesh::nodeset_nodes
void nodeset_nodes(int64_t nset_id, std::vector< int64_t > &nodes) const override
Definition: Iogn_DashSurfaceMesh.C:160
Iogn::Hex8
Definition: Iogn_DashSurfaceMesh.h:58
Iogn::DashSurfaceMesh::topology_type
std::pair< std::string, int > topology_type(int64_t block_number) const override
Definition: Iogn_DashSurfaceMesh.C:132
Iogn::ExodusData::coordinates
std::vector< double > coordinates
Definition: Iogn_DashSurfaceMesh.h:72
Iogn::ExodusData::globalIdsOfLocalNodes
const std::vector< int > globalIdsOfLocalNodes
Definition: Iogn_DashSurfaceMesh.h:81
Iogn::ExodusMesh::mLocalNumberOfElements
int64_t mLocalNumberOfElements
Definition: Iogn_DashSurfaceMesh.h:269
Iogn::DashSurfaceData::DashSurfaceData
DashSurfaceData(const std::vector< double > &coords, const std::vector< int > &connectivity1, const std::vector< int > &connectivity2)
Definition: Iogn_DashSurfaceMesh.h:131
Iogn::DashSurfaceMesh::node_communication_map
void node_communication_map(std::vector< int64_t > &map, std::vector< int > &proc) override
Definition: Iogn_DashSurfaceMesh.C:162
Iogn::DashSurfaceData::globalIdsOfLocalElements
std::vector< int > globalIdsOfLocalElements
Definition: Iogn_DashSurfaceMesh.h:126
Iogn_GeneratedMesh.h
Iogn::DashSurfaceData
Definition: Iogn_DashSurfaceMesh.h:114
Iogn::SharedNode::procId
int procId
Definition: Iogn_DashSurfaceMesh.h:55
Iogn::ExodusMesh
Definition: Iogn_DashSurfaceMesh.h:216
Iogn::ExodusData::elementBlockConnectivity
const std::vector< std::vector< int > > elementBlockConnectivity
Definition: Iogn_DashSurfaceMesh.h:73
Iogn::DashSurfaceData::surfaceAConnectivity
const std::vector< int > surfaceAConnectivity
Definition: Iogn_DashSurfaceMesh.h:117
Iogn::SharedNode::SharedNode
SharedNode()
Definition: Iogn_DashSurfaceMesh.h:53
Iogn::DashSurfaceMesh::communication_node_count_proc
int64_t communication_node_count_proc() const override
Definition: Iogn_DashSurfaceMesh.C:91
Iogn::DashSurfaceData::sharedNodes
std::vector< SharedNode > sharedNodes
Definition: Iogn_DashSurfaceMesh.h:129
Iogn::DashSurfaceData::globalNumberOfElementsSurface1
int globalNumberOfElementsSurface1
Definition: Iogn_DashSurfaceMesh.h:123
Iogn::ExodusMesh::block_count
int64_t block_count() const override
Definition: Iogn_DashSurfaceMesh.C:293
Iogn::ExodusMesh::node_map
void node_map(std::vector< int > &map) const override
Definition: Iogn_DashSurfaceMesh.C:378
Iogn::DashSurfaceData::surfaceBConnectivity
const std::vector< int > surfaceBConnectivity
Definition: Iogn_DashSurfaceMesh.h:118
Iogn::ExodusData::globalNumberOfNodes
const int globalNumberOfNodes
Definition: Iogn_DashSurfaceMesh.h:78
Iogn::ExodusData::globalNumberOfElementsInBlock
const std::vector< int > globalNumberOfElementsInBlock
Definition: Iogn_DashSurfaceMesh.h:74
Iogn::ExodusData::sidesetConnectivity
std::vector< std::vector< int > > sidesetConnectivity
Definition: Iogn_DashSurfaceMesh.h:90
Iogn::DashSurfaceMesh
Definition: Iogn_DashSurfaceMesh.h:161
Iogn::DashSurfaceMesh::sideset_elem_sides
void sideset_elem_sides(int64_t setId, std::vector< int64_t > &elem_sides) const override
Definition: Iogn_DashSurfaceMesh.C:138
Iogn::DashSurfaceMesh::sideset_count
int64_t sideset_count() const override
Definition: Iogn_DashSurfaceMesh.C:64
Iogn::DashSurfaceData::globalNumberOfElements
int globalNumberOfElements
Definition: Iogn_DashSurfaceMesh.h:121
Iogn::DashSurfaceData::setSerialDefaults
void setSerialDefaults()
Definition: Iogn_DashSurfaceMesh.h:140
Iogn::Beam2
Definition: Iogn_DashSurfaceMesh.h:58
Iogn::ExodusData::globalIdsOfLocalElements
const std::vector< int > globalIdsOfLocalElements
Definition: Iogn_DashSurfaceMesh.h:80
Iogn::getTopologyName
std::string getTopologyName(Topology topology)
Definition: Iogn_DashSurfaceMesh.h:60
Iogn::ExodusMesh::sideset_side_count_proc
int64_t sideset_side_count_proc(int64_t id) const override
Definition: Iogn_DashSurfaceMesh.C:311
Iogn::SharedNode::nodeId
int nodeId
Definition: Iogn_DashSurfaceMesh.h:54
Iogn::ExodusMesh::node_count
int64_t node_count() const override
Definition: Iogn_DashSurfaceMesh.C:279
Iogn::DashSurfaceMesh::mDashSurfaceData
DashSurfaceData mDashSurfaceData
Definition: Iogn_DashSurfaceMesh.h:213
Iogn::ExodusMesh::~ExodusMesh
~ExodusMesh() override=default
Iogn::DashSurfaceMesh::element_map
void element_map(int64_t block_number, std::vector< int > &map) const override
Definition: Iogn_DashSurfaceMesh.C:195
Iogn::ExodusMesh::topology_type
std::pair< std::string, int > topology_type(int64_t blockNumber) const override
Definition: Iogn_DashSurfaceMesh.C:347
Iogn::GeneratedMesh
Definition: Iogn_GeneratedMesh.h:49
Iogn::ExodusMesh::sideset_elem_sides
void sideset_elem_sides(int64_t setId, std::vector< int64_t > &elem_sides) const override
Definition: Iogn_DashSurfaceMesh.C:353
Iogn::ExodusMesh::nodeset_nodes
void nodeset_nodes(int64_t nset_id, std::vector< int64_t > &nodes) const override
Definition: Iogn_DashSurfaceMesh.C:368
Iogn::ExodusData::localNumberOfElementsInBlock
const std::vector< int > localNumberOfElementsInBlock
Definition: Iogn_DashSurfaceMesh.h:75
Iogn::DashSurfaceMesh::node_count_proc
int64_t node_count_proc() const override
Definition: Iogn_DashSurfaceMesh.C:42
Iogn
A namespace for the generated database format.
Definition: Iogn_DashSurfaceMesh.C:38
Iogn::ExodusMesh::node_count_proc
int64_t node_count_proc() const override
Definition: Iogn_DashSurfaceMesh.C:281
Iogn::ExodusMesh::nodeset_count
int64_t nodeset_count() const override
Definition: Iogn_DashSurfaceMesh.C:298
Iogn::NUM_NODES_PER_QUAD_FACE
Definition: Iogn_DashSurfaceMesh.h:49
Iogn::ExodusMesh::sideset_count
int64_t sideset_count() const override
Definition: Iogn_DashSurfaceMesh.C:300
Iogn::DashSurfaceMesh::element_count
int64_t element_count() const override
Definition: Iogn_DashSurfaceMesh.C:47
Iogn::DashSurfaceData::coordinates
const std::vector< double > coordinates
Definition: Iogn_DashSurfaceMesh.h:116
Iogn::NUMBER_OF_SURFACES
Definition: Iogn_DashSurfaceMesh.h:49
Iogn::INVALID
Definition: Iogn_DashSurfaceMesh.h:49
Iogn::ExodusMesh::ExodusMesh
ExodusMesh(const ExodusData &exodusData)
Definition: Iogn_DashSurfaceMesh.C:257
Iogn::SPATIAL_DIMENSION
Definition: Iogn_DashSurfaceMesh.h:49
Iogn::ExodusMesh::element_count
int64_t element_count() const override
Definition: Iogn_DashSurfaceMesh.C:286
Ioss_Shell4.h
Iogn::DashSurfaceMesh::nodeset_count
int64_t nodeset_count() const override
Definition: Iogn_DashSurfaceMesh.C:62
Iogn::ExodusData
Definition: Iogn_DashSurfaceMesh.h:70
Iogn::DashSurfaceMesh::block_count
int64_t block_count() const override
Definition: Iogn_DashSurfaceMesh.C:60
Iogn::DashSurfaceData::globalNumberOfElementsSurface2
int globalNumberOfElementsSurface2
Definition: Iogn_DashSurfaceMesh.h:124
Iogn::ExodusData::blockTopologicalData
const std::vector< Topology > blockTopologicalData
Definition: Iogn_DashSurfaceMesh.h:76
Iogn::DashSurfaceMesh::element_count_proc
int64_t element_count_proc() const override
Definition: Iogn_DashSurfaceMesh.C:66
Iogn::Shell4
Definition: Iogn_DashSurfaceMesh.h:58
Iogn::ExodusMesh::connectivity
void connectivity(int64_t blockNumber, int *connectivityForBlock) const override
Definition: Iogn_DashSurfaceMesh.C:339
Iogn::DashSurfaceData::globalIdsOfLocalNodes
std::vector< int > globalIdsOfLocalNodes
Definition: Iogn_DashSurfaceMesh.h:127
Ioss_Beam2.h
Iogn::DashSurfaceMesh::~DashSurfaceMesh
~DashSurfaceMesh() override=default
Iogn::ExodusMesh::mExodusData
const ExodusData & mExodusData
Definition: Iogn_DashSurfaceMesh.h:271
Iogn::ExodusData::sidesetTouchingBlocks
std::vector< std::vector< std::string > > sidesetTouchingBlocks
Definition: Iogn_DashSurfaceMesh.h:91
Iogn::ExodusMesh::nodeset_node_count_proc
int64_t nodeset_node_count_proc(int64_t id) const override
Definition: Iogn_DashSurfaceMesh.C:309
Iogn::SharedNode
Definition: Iogn_DashSurfaceMesh.h:51
Iogn::ExodusData::sharedNodes
std::vector< SharedNode > sharedNodes
Definition: Iogn_DashSurfaceMesh.h:83
Ioss::ElementTopology::name
const std::string & name() const
Definition: Ioss_ElementTopology.h:83
Iogn::Topology
Topology
Definition: Iogn_DashSurfaceMesh.h:58
Iogn::DashSurfaceMesh::node_map
void node_map(std::vector< int > &map) const override
Definition: Iogn_DashSurfaceMesh.C:175
Ioss_Hex8.h
Iogn::ExodusMesh::node_communication_map
void node_communication_map(std::vector< int64_t > &map, std::vector< int > &proc) override
Definition: Iogn_DashSurfaceMesh.C:370
Iogn::DashSurfaceMesh::DashSurfaceMesh
DashSurfaceMesh(DashSurfaceData &dashSurfaceData)
Definition: Iogn_DashSurfaceMesh.h:164
Iogn::DashSurfaceMesh::node_count
int64_t node_count() const override
Definition: Iogn_DashSurfaceMesh.C:40
Iogn::ExodusMesh::sideset_touching_blocks
std::vector< std::string > sideset_touching_blocks(int64_t setId) const override
Definition: Iogn_DashSurfaceMesh.C:363
Iogn::DashSurfaceMesh::coordinates
void coordinates(double *coord) const override
Definition: Iogn_DashSurfaceMesh.C:96
Iogn::ExodusMesh::element_count_proc
int64_t element_count_proc() const override
Definition: Iogn_DashSurfaceMesh.C:302
Iogn::ExodusMesh::communication_node_count_proc
int64_t communication_node_count_proc() const override
Definition: Iogn_DashSurfaceMesh.C:316
Iogn::DashSurfaceData::globalNumberOfNodes
int globalNumberOfNodes
Definition: Iogn_DashSurfaceMesh.h:120
Iogn::ExodusMesh::mElementOffsetForBlock
std::vector< int64_t > mElementOffsetForBlock
Definition: Iogn_DashSurfaceMesh.h:272
Iogn::ExodusMesh::coordinates
void coordinates(double *coord) const override
Definition: Iogn_DashSurfaceMesh.C:321
Iogn::DashSurfaceMesh::sideset_side_count_proc
int64_t sideset_side_count_proc(int64_t id) const override
Definition: Iogn_DashSurfaceMesh.C:86
Iogn::DashSurfaceMesh::connectivity
void connectivity(int64_t block_number, int *connect) const override
Definition: Iogn_DashSurfaceMesh.C:117
Iogn::ExodusData::ExodusData
ExodusData(const std::vector< double > coords, const std::vector< std::vector< int >> elemBlockConnectivity, const std::vector< int > globalNumOfElemsInBlock, const std::vector< int > localNumOfElemsInBlock, const std::vector< Topology > blockTopoData, int globalNumNodes, const std::vector< int > globalIdsOfLocalElems, const std::vector< int > globalIdsLocalNodes, std::vector< std::vector< int >> sidesetConn=std::vector< std::vector< int >>(), std::vector< std::vector< std::string >> sidesetBlocks=std::vector< std::vector< std::string >>())
Definition: Iogn_DashSurfaceMesh.h:94
Iogn::ExodusMesh::element_map
void element_map(int64_t blockNumber, std::vector< int > &map) const override
Definition: Iogn_DashSurfaceMesh.C:398
Iogn::DashSurfaceMesh::nodeset_node_count_proc
int64_t nodeset_node_count_proc(int64_t id) const override
Definition: Iogn_DashSurfaceMesh.C:84