GitLab

Changes from ARL's Repo (C Wrappers, DSM rework, Custom Types, Templates, GridControllers, TIFF integration, XdmfAggregate)

Rework of HeavyDataController and HDF5Controller to remove extra code and move HeavyDataController away from being too dependent on hdf5 style
XdmfFunction now supports negative numbers in addition to the - operator
Reworked the interaction between array references and reading
Cleaned up some warnings that showed up in pedantic
Adjusted mpi tests to test against the MPIEXEC variable as opposed to hard calling mpirun
Still needs to be changed to work better with Cray mpi style execution
Updates to XdmfArrayType to allow for signed and floating point checking
General test and Documentation updates

Added subset; modified Array's interaction with Function; added new functionality to XdmfInformation subarrays; adjusted documentation to make more uniform

made changes for preparations to push to master; still need to finish documentation changes and line length changes

Eliminate getRealPath calls which are expensive and not necessary in many cases
Parse XML node content only when necessary (parsing arrays)
Fix cases where copies were made of strings instead of using references
Use "map.insert()" rather than "map[] =" when adding properties to map

more than one map to be attached.

Add additional attribute to XdmfMap, which is the name of the map.

Using statements have been added to XdmfSharedPtr.hpp. All used of
boost::shared_ptr and boost::shared_dynamic_cast have been replaced
by shared_ptr and shared_dynamic_cast. Slight modification to XdmfCore.i
to get swig wrapping working again.

used in other FEM codes, in a manner that makes it easy to assemble nodal
forces.

Get test compiling and running again.

Added documentation to several methods. Modified Doxygen configuration file to
correctly process macros (tested using Doxygen 1.7.1). Correctly format
documentation to 80 characters per line.

Hopefully this will become a standard style for Xdmf development.
All spaces - 80 character line wrapping.

ENH: Add XdmfHeavyDataController base class and make XdmfArray use it.  Add XdmfHeavyDataWriter base class and make XdmfWriter use it.  This is in preparation to add additional heavy data formats.

ENH: Change some method names in XdmfArray to be clearer and less verbose.  Modify files for documentation clarity.  Modify some minor things to prevent -Wall warnings in gcc.  Add python install rules and rpathing.

ENH: Commit Ken Renard's patches modifying populateItem and XdmfCoreReader to support some xpath functionality for backwards compatibility.