- Z. Sun, J. Baumes, P. Tunison, M. Turek, and A. Hoogs, "Tattoo detection and localization using region-based deep learning," in International Conference on Pattern Recognition (ICPR), Cancun, 2016.
- S. Oh, M. Pandey, I. Kim, A. Hoogs, and J. Baumes, "Personalized Economy of Images in Social Forums: An Analysis on Supply, Consumption, and Saliency," in International Conference on Pattern Recognition (ICPR), Stockholm, Sweden, 2014.
- M. Hanwell, A. Chaudhary, J. Baumes, and B. Geveci, "VTK's second Google Summer of Code," Kitware Source, no. 31, 2014.
- B. Wylie, D. Dunlavy, W. Davis, and J. Baumes, "Using NoSQL databases for streaming network analysis," presented at the 2012 IEEE Symposium on Large Data Analysis and Visualization (LDAV), Seattle, WA, USA, 2012.
- J. Shepherd, J. Baumes, and A. Chaudhary, "Geospatial and entity driven document visualization for non-proliferation analysis," presented at the Geospatial and Entity Driven Document Visualization for Non-proliferation Analysis, 2011.
- A. Chaudhary and J. Baumes, "Is what you see what you get? Geospatial visualizations address scale and usability (Industry Trends)," GEO World, vol. 24, no. 5, May. 2011.
- B. Wylie and J. Baumes, "A unified toolkit for information and scientific visualization," presented at the IS&T/SPIE Electronic Imaging, San Jose, CA, 2009.
- J. Baumes, H. Chen, M. Francisco, M. Goldberg, M. Magdon-Ismail, and W. Wallace, "ViSAGE: A Virtual laboratory for Simulation and Analysis of Social Group Evolution," ACM Transactions on Autonomous and Adaptive Systems, vol. 3, no. 3, pp. 1-35, Aug. 2008.
- A. Cedilnik, J. Baumes, L. Ibanez, S. Megason, and B. Wylie, "Integration of information and volume visualization for analysis of cell lineage and gene expression during embryogenesis," presented at the Electronic Imaging 2008, San Jose, CA, 2008.
- B. Wylie, J. Baumes, and T. Shead, "G-Space: a linear time graph layout," presented at the Electronic Imaging 2008, San Jose, CA, 2008.
- P. Crossno et al., "Intelligence Analysis Using Titan," presented at the 2007 IEEE Symposium on Visual Analytics Science and Technology, Sacramento, CA, USA, 2007.
- J. Baumes, M. Goldberg, M. Magdon-Ismail, and W. Wallace, "Identification of hidden groups in communications," in Handbooks in Information Systems, Volume 2: National Security. Elsevier, 2007, pp. 209-242.
- J. Baumes, "Algorithms for discovering hidden groups in communications," Ph.D. dissertation, Rensselaer Polytechnic Institute, 2006.
- J. Baumes, M. Goldberg, and M. Magdon-Ismail, "Efficient Identification of Overlapping Communities," in Intelligence and Security Informatics. Springer Berlin Heidelberg, 2005, pp. 27-36.
- J. Baumes, M. Goldberg, M. Magdon-Ismail, and W. Wallace, "Discovering Hidden Groups in Communication Networks," in Intelligence and Security Informatics. Springer Berlin Heidelberg, 2004, pp. 378-389.