/*=========================================================================

  Program:   Visualization Toolkit

  Copyright (c) Ken Martin, Will Schroeder, Bill Lorensen
  All rights reserved.
  See Copyright.txt or http://www.kitware.com/Copyright.htm for details.

     This software is distributed WITHOUT ANY WARRANTY; without even
     the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR
     PURPOSE.  See the above copyright notice for more information.

=========================================================================*/
/*
 * Copyright (C) 2010 The Android Open Source Project
 *
 * Licensed under the Apache License, Version 2.0 (the "License");
 * you may not use this file except in compliance with the License.
 * You may obtain a copy of the License at
 *
 *      http://www.apache.org/licenses/LICENSE-2.0
 *
 * Unless required by applicable law or agreed to in writing, software
 * distributed under the License is distributed on an "AS IS" BASIS,
 * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
 * See the License for the specific language governing permissions and
 * limitations under the License.
 *
 */

#include <jni.h>
#include <errno.h>
#include <sstream>

#include "vtkNew.h"

#define SYNTHETIC 1
#ifdef SYNTHETIC
#include "vtkImageCast.h"
#include "vtkRTAnalyticSource.h"
#else
#include "vtkNrrdReader.h"
#endif

#include "vtkOpenGLGPUVolumeRayCastMapper.h"
#include "vtkVolumeProperty.h"
#include "vtkColorTransferFunction.h"
#include "vtkPiecewiseFunction.h"
#include "vtkVolume.h"
#include "vtkActor.h"
#include "vtkCamera.h"
#include "vtkConeSource.h"
#include "vtkDebugLeaks.h"
#include "vtkGlyph3D.h"
#include "vtkPolyData.h"
#include "vtkPolyDataMapper.h"
#include "vtkRenderWindow.h"
#include "vtkRenderer.h"
#include "vtkSphereSource.h"
#include "vtkTextActor.h"
#include "vtkTextProperty.h"
#include "vtkImageData.h"
#include "vtkPointData.h"

#include "vtkAndroidRenderWindowInteractor.h"
#include "vtkCommand.h"

#include <android/log.h>

#define LOGI(...) ((void)__android_log_print(ANDROID_LOG_INFO, "NativeVTK", __VA_ARGS__))
#define LOGW(...) ((void)__android_log_print(ANDROID_LOG_WARN, "NativeVTK", __VA_ARGS__))

extern "C" {
    JNIEXPORT jlong JNICALL Java_com_kitware_VolumeRender_VolumeRenderLib_init(JNIEnv * env, jobject obj,  jint width, jint height);
    JNIEXPORT void JNICALL Java_com_kitware_VolumeRender_VolumeRenderLib_render(JNIEnv * env, jobject obj, jlong renWinP);
    JNIEXPORT void JNICALL Java_com_kitware_VolumeRender_VolumeRenderLib_onKeyEvent(JNIEnv * env, jobject obj, jlong udp,
      jboolean down, jint keyCode, jint metaState, jint repeatCount
      );
    JNIEXPORT void JNICALL Java_com_kitware_VolumeRender_VolumeRenderLib_onMotionEvent(JNIEnv * env, jobject obj, jlong udp,
      jint action,
      jint eventPointer,
      jint numPtrs,
      jfloatArray xPos, jfloatArray yPos,
      jintArray ids, jint metaState);
};

struct userData
{
  vtkRenderWindow *RenderWindow;
  vtkRenderer *Renderer;
  vtkAndroidRenderWindowInteractor *Interactor;
};

/*
 * Here is where you would setup your pipeline and other normal VTK logic
 */
JNIEXPORT jlong JNICALL Java_com_kitware_VolumeRender_VolumeRenderLib_init(JNIEnv * env, jobject obj,  jint width, jint height)
{
  vtkRenderWindow *renWin = vtkRenderWindow::New();
  char jniS[4] = {'j','n','i',0};
  renWin->SetWindowInfo(jniS); // tell the system that jni owns the window not us
  renWin->SetSize(width,height);
  vtkNew<vtkRenderer> renderer;
  renWin->AddRenderer(renderer.Get());

  vtkNew<vtkAndroidRenderWindowInteractor> iren;
  iren->SetRenderWindow(renWin);

  vtkNew<vtkOpenGLGPUVolumeRayCastMapper> volumeMapper;

  vtkNew<vtkPiecewiseFunction> pwf;

#ifdef SYNTHETIC
  vtkNew<vtkRTAnalyticSource> wavelet;
  wavelet->SetWholeExtent(-63, 64,
                          -63, 64,
                          -63, 64);
  wavelet->SetCenter(0.0, 0.0, 0.0);

  vtkNew<vtkImageCast> ic;
  ic->SetInputConnection(wavelet->GetOutputPort());
  ic->SetOutputScalarTypeToUnsignedChar();
  volumeMapper->SetInputConnection(ic->GetOutputPort());

  pwf->AddPoint(0, 0);
  pwf->AddPoint(255, 0.1);
#else
  vtkNew<vtkNrrdReader> mi;
  mi->SetFileName("/sdcard/CT-chest-quantized.nrrd");
  mi->Update();

  double range[2];
  mi->GetOutput()->GetPointData()->GetScalars()->GetRange(range);
  LOGI("Min %f Max %f type %s", range[0], range[1], mi->GetOutput()->GetScalarTypeAsString());

  volumeMapper->SetInputConnection(mi->GetOutputPort());

  double tweak = 80.0;
  pwf->AddPoint(0, 0);
  pwf->AddPoint(255*(67.0106+tweak)/3150.0, 0);
  pwf->AddPoint(255*(251.105+tweak)/3150.0, 0.3);
  pwf->AddPoint(255*(439.291+tweak)/3150.0, 0.5);
  pwf->AddPoint(255*3071/3150.0, 0.616071);
#endif

  volumeMapper->SetAutoAdjustSampleDistances(1);
  volumeMapper->SetSampleDistance(0.5);

  vtkNew<vtkVolumeProperty> volumeProperty;
  volumeProperty->SetShade(1);
  volumeProperty->SetInterpolationTypeToLinear();

  vtkNew<vtkColorTransferFunction> ctf;
  ctf->AddRGBPoint(0, 0, 0, 0);
  ctf->AddRGBPoint(255*67.0106/3150.0, 0.54902, 0.25098, 0.14902);
  ctf->AddRGBPoint(255*251.105/3150.0, 0.882353, 0.603922, 0.290196);
  ctf->AddRGBPoint(255*439.291/3150.0, 1, 0.937033, 0.954531);
  ctf->AddRGBPoint(255*3071/3150.0, 0.827451, 0.658824, 1);

  volumeProperty->SetColor(ctf.GetPointer());
  volumeProperty->SetScalarOpacity(pwf.GetPointer());

  vtkNew<vtkVolume> volume;
  volume->SetMapper(volumeMapper.GetPointer());
  volume->SetProperty(volumeProperty.GetPointer());

  renderer->SetBackground2(0.2,0.3,0.4);
  renderer->SetBackground(0.1,0.1,0.1);
  renderer->GradientBackgroundOn();
  renderer->AddVolume(volume.GetPointer());
  renderer->ResetCamera();
//  renderer->GetActiveCamera()->Zoom(1.4);
  renderer->GetActiveCamera()->Zoom(0.7);

  struct userData *foo = new struct userData();
  foo->RenderWindow = renWin;
  foo->Renderer = renderer.Get();
  foo->Interactor = iren.Get();

  return (jlong)foo;
}

JNIEXPORT void JNICALL Java_com_kitware_VolumeRender_VolumeRenderLib_render(JNIEnv * env, jobject obj, jlong udp)
{
  struct userData *foo = (userData *)(udp);
  foo->RenderWindow->SwapBuffersOff(); // android does it
  foo->RenderWindow->Render();
  foo->RenderWindow->SwapBuffersOn(); // reset
}

JNIEXPORT void JNICALL Java_com_kitware_VolumeRender_VolumeRenderLib_onKeyEvent(JNIEnv * env, jobject obj, jlong udp,
  jboolean down, jint keyCode, jint metaState, jint repeatCount)
{
  struct userData *foo = (userData *)(udp);
  foo->Interactor->HandleKeyEvent(down, keyCode, metaState, repeatCount);
}

JNIEXPORT void JNICALL Java_com_kitware_VolumeRender_VolumeRenderLib_onMotionEvent(JNIEnv * env, jobject obj, jlong udp,
      jint action,
      jint eventPointer,
      jint numPtrs,
      jfloatArray xPos, jfloatArray yPos,
      jintArray ids, jint metaState)
{
  struct userData *foo = (userData *)(udp);

  int xPtr[VTKI_MAX_POINTERS];
  int yPtr[VTKI_MAX_POINTERS];
  int idPtr[VTKI_MAX_POINTERS];

  // only allow VTKI_MAX_POINTERS touches right now
  if (numPtrs > VTKI_MAX_POINTERS)
    {
    numPtrs = VTKI_MAX_POINTERS;
    }

  // fill in the arrays
  jfloat *xJPtr = env->GetFloatArrayElements(xPos, 0);
  jfloat *yJPtr = env->GetFloatArrayElements(yPos, 0);
  jint *idJPtr = env->GetIntArrayElements(ids, 0);
  for (int i = 0; i < numPtrs; ++i)
    {
    xPtr[i] = (int)xJPtr[i];
    yPtr[i] = (int)yJPtr[i];
    idPtr[i] = idJPtr[i];
    }
  env->ReleaseIntArrayElements(ids, idJPtr, 0);
  env->ReleaseFloatArrayElements(xPos, xJPtr, 0);
  env->ReleaseFloatArrayElements(yPos, yJPtr, 0);

  foo->Interactor->HandleMotionEvent(action, eventPointer, numPtrs, xPtr, yPtr, idPtr, metaState);
}
