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Changed vtkAMRSliceFilter to be an instance of vtkOverlappingAMRAlgorithm

Change-Id: I8dd8f679354418288a9e97c732ba7a9a9d3405d3

Change-Id: I1d701925239a64aeda6f3f473e9265040a7663f9

Changed the AMR base reader and sub-classes for flash and enzo to use
vtkOverlappingAMR. Further, updated vtkAMRUtilities to work on
vtkOverlappingAMR.

Change-Id: I1a71d37302aaba11ca5897b4832aae8e1b3b30af

Change-Id: I394e2fbb4c738887cd55f0a550fa0ecfcee0a7f0

Removed reference classes/code, that has been moved under the
References directory, from the list of sources to be compiled.

Change-Id: Ia9687b927d0893b942558b14c8debf9112f03d1f

Change-Id: I7652c141a28e5f1aabf7dd92707ce4d4314dedc1

Change-Id: Ia4163b286408a7c8744da40066937a0a483a5da6

Change-Id: I155c56a397918035f7674e3ee370f39a7f6bee27

Change-Id: Iba5e56191c20d77a41865191bd8fec0894539d01

Call GenerateVisibility & ParentChildInfo

Change-Id: Ic1fe431230690119fdbc703a899a4d0e16a8d9f2

Change-Id: Iea0f198f3e638cb8d9cddb644bd57828a18f95d8

Change-Id: Iddae500355e86513fd44cd9d670db48a7c28bb97

Remove call to build parent/child relationship

Change-Id: I51aec672ff364ba9177abafce92d236a32a14b6c

Change-Id: Ic9dcfa980e75037711bcb5804bcab5116c8e1660

Change-Id: I4dfb70d42ca0e93253e1ccd339d6f6e9d7dee8e7

Change-Id: I7558cd377f1fc1ae459c6c79860f291ccf9733af

Change-Id: I20bb2b2f4b6a81ae2ca174d2e5bd8effe0507f5f

Added the new level ID scalars filters to the built.

Change-Id: I39df16623c822b4ef5fbcf99405a917b04f8f59c

Added vtkLevelIdScalars filter, an empty class that inherits
from vtkOverlappingAMRLevelIdScalars for backwards compatibility.

Change-Id: I0ac7426ea2fff014ca2c78a57aa04c8db1bbe32e

Moved common metadata logic such as GetMetaData, HasLevelMetadata
and metadata accessors that return a generic vtkInformation object
to the base class. The overlapping AMR additionally extends these
methods by adding the concept of the vtkAMRBox.

Change-Id: Id467d25c246c7baa244aaac2c36c37249a9072fa

LevelIdScalars filters for both overlapping and non-overlapping AMR. Each
filter is a concrete instance of vtkOverlappingAMRAlgorithm and
vtkNonOverlappingAMRAlgorithm respectively.

Renamed vtkLevelIdScalaras to vtkNonOverlappingAMRLevelIdScalars

Change-Id: Ibaff4be5bdf65b3c8e6019c550aada0e1ac0a718

Change-Id: I1e38aea8d0c88f675be87ded36268803dec2fa0a

Change-Id: Ib03cbfb65694c97c2a548f9f45387548b1bda942

Changed the base class of vtkExtractDataSets to be
vtkMultiBlockDataSetAlgorithm.

Change-Id: Ie548ddef230abf34c8f200c7d6fe2e558ccd6356

Changed the vtkExtractLevel algorithm to inherit from vtkMultiBlockDataSetAlgorithm

Change-Id: Ie1c284b3d1af3a492a4406d1f03158994c8f7799

Added vtkUniformGridAMRAlgorithm that inherits from vtkAlgorithm.Further
implemented vtkOverlappingAMRAlgorithm and vtkNonOverlappingAMRAlgorithm
that both inherit from vtkUniformGridAMRAlgorithm and provide output routines
for each corresponding type: vtkOverlappingAMR and vtkNonOverlappingAMR
respectively. Filters that are agnostic of the AMR type, i.e., work on AMR
(level,idx) pair can implement vtkUniformGridAMRAlgorithm while filters that
expected Berger-Collela AMR can implement vtkOverlappingAMRAlgorithm.

Change-Id: I17f3a05040c8b65b744daa68cdac7a760ee5a978

Change-Id: Ia0b47cf4c6f09fc318dfb0ac2c47ea4d14ef12a7

Change-Id: I917b47bea79782932e62fc21bcf74335fdb0edd6

Custom iterator for vtkUniformGridAMR datasets

Change-Id: Ife39f5cdf7d172b9a39755672d36002f5396156a

Change-Id: I17125d91136b7f555513013bf66323e90a6b2b8f

Change-Id: I0295c14335b8493e8e260db00e6244b2eb39b8cf

Added support for vtkOverlappingAMR and vtkNonOverlappingAMR.

Change-Id: Ib7a7d1786d339162417a4426a69ccb87b094ebcb

Adding legacy classes for backwards compatibility.

Rename the vtkHierarchicalBoxDataIterator to vtkUniformGridAMRDataIterator

Rename class vtkHierarchicalBoxDataSet to vtkOverlappingAMR