/*=========================================================================

  Program:   Visualization Toolkit
  Module:    vtkOBBTree.cxx

  Copyright (c) Ken Martin, Will Schroeder, Bill Lorensen
  All rights reserved.
  See Copyright.txt or http://www.kitware.com/Copyright.htm for details.

     This software is distributed WITHOUT ANY WARRANTY; without even
     the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR
     PURPOSE.  See the above copyright notice for more information.

=========================================================================*/
#include "vtkOBBTree.h"

#include "vtkCellArray.h"
#include "vtkGenericCell.h"
#include "vtkLine.h"
#include "vtkMath.h"
#include "vtkMatrix4x4.h"
#include "vtkObjectFactory.h"
#include "vtkPlane.h"
#include "vtkPolyData.h"
#include "vtkPolygon.h"
#include "vtkTriangle.h"
#include "vtkUnstructuredGrid.h"

vtkCxxRevisionMacro(vtkOBBTree, "1.63");
vtkStandardNewMacro(vtkOBBTree);

#define vtkCELLTRIANGLES(CELLPTIDS, TYPE, IDX, PTID0, PTID1, PTID2) \
        { switch( TYPE ) \
          { \
          case VTK_TRIANGLE: \
          case VTK_POLYGON: \
          case VTK_QUAD: \
            PTID0 = CELLPTIDS[0]; \
            PTID1 = CELLPTIDS[(IDX)+1]; \
            PTID2 = CELLPTIDS[(IDX)+2]; \
            break; \
          case VTK_TRIANGLE_STRIP: \
            PTID0 = CELLPTIDS[IDX]; \
            PTID1 = CELLPTIDS[(IDX)+1+((IDX)&1)]; \
            PTID2 = CELLPTIDS[(IDX)+2-((IDX)&1)]; \
            break; \
          default: \
            PTID0 = PTID1 = PTID2 = -1; \
          } }

vtkOBBNode::vtkOBBNode()
{
  this->Cells = NULL;
  this->Parent = NULL;
  this->Kids = NULL;
}

vtkOBBNode::~vtkOBBNode()
{
  if (this->Kids) 
    {
    delete [] this->Kids;
    }
  if (this->Cells) 
    { 
    this->Cells->Delete();
    }
}

// Construct with automatic computation of divisions, averaging
// 25 cells per octant.
vtkOBBTree::vtkOBBTree()
{
  this->DataSet = NULL;
  this->Level = 4;
  this->MaxLevel = 12;
  this->Automatic = 1;
  this->Tolerance = 0.01;
  this->Tree = NULL;
  this->PointsList = NULL;
  this->InsertedPoints = NULL;
  this->OBBCount = this->DeepestLevel = 0;
}

vtkOBBTree::~vtkOBBTree()
{
  this->FreeSearchStructure();
}

void vtkOBBTree::FreeSearchStructure()
{
  if ( this->Tree )
    {
    this->DeleteTree(this->Tree);
    delete this->Tree;
    this->Tree = NULL;
    }
}

void vtkOBBTree::DeleteTree(vtkOBBNode *OBBptr)
{
  if ( OBBptr->Kids != NULL )
    {
    this->DeleteTree(OBBptr->Kids[0]);
    this->DeleteTree(OBBptr->Kids[1]);
    delete OBBptr->Kids[0];
    delete OBBptr->Kids[1];
    }
}

// Compute an OBB from the list of points given. Return the corner point
// and the three axes defining the orientation of the OBB. Also return
// a sorted list of relative "sizes" of axes for comparison purposes.
void vtkOBBTree::ComputeOBB(vtkPoints *pts, double corner[3], double max[3],
                            double mid[3], double min[3], double size[3])
{
  int i;
  vtkIdType numPts, pointId;
  double x[3], mean[3], xp[3], *v[3], v0[3], v1[3], v2[3];
  double *a[3], a0[3], a1[3], a2[3];
  double tMin[3], tMax[3], closest[3], t;

  //
  // Compute mean
  //
  numPts = pts->GetNumberOfPoints();
  mean[0] = mean[1] = mean[2] = 0.0;
  for (pointId=0; pointId < numPts; pointId++ )
    {
    pts->GetPoint(pointId, x);
    for (i=0; i < 3; i++)
      {
      mean[i] += x[i];
      }
    }
  for (i=0; i < 3; i++)
    {
    mean[i] /= numPts;
    }

  //
  // Compute covariance matrix
  //
  a[0] = a0; a[1] = a1; a[2] = a2; 
  for (i=0; i < 3; i++)
    {
    a0[i] = a1[i] = a2[i] = 0.0;
    }

  for (pointId=0; pointId < numPts; pointId++ )
    {
    pts->GetPoint(pointId, x);
    xp[0] = x[0] - mean[0]; xp[1] = x[1] - mean[1]; xp[2] = x[2] - mean[2];
    for (i=0; i < 3; i++)
      {
      a0[i] += xp[0] * xp[i];
      a1[i] += xp[1] * xp[i];
      a2[i] += xp[2] * xp[i];
      }
    }//for all points

  for (i=0; i < 3; i++)
    {
    a0[i] /= numPts;
    a1[i] /= numPts;
    a2[i] /= numPts;
    }

  //
  // Extract axes (i.e., eigenvectors) from covariance matrix. 
  //
  v[0] = v0; v[1] = v1; v[2] = v2; 
  vtkMath::Jacobi(a,size,v);
  max[0] = v[0][0]; max[1] = v[1][0]; max[2] = v[2][0];
  mid[0] = v[0][1]; mid[1] = v[1][1]; mid[2] = v[2][1];
  min[0] = v[0][2]; min[1] = v[1][2]; min[2] = v[2][2];

  for (i=0; i < 3; i++)
    {
    a[0][i] = mean[i] + max[i];
    a[1][i] = mean[i] + mid[i];
    a[2][i] = mean[i] + min[i];
    }

  //
  // Create oriented bounding box by projecting points onto eigenvectors.
  //
  tMin[0] = tMin[1] = tMin[2] = VTK_DOUBLE_MAX;
  tMax[0] = tMax[1] = tMax[2] = -VTK_DOUBLE_MAX;

  for (pointId=0; pointId < numPts; pointId++ )
    {
    pts->GetPoint(pointId, x);
    for (i=0; i < 3; i++)
      {
      vtkLine::DistanceToLine(x, mean, a[i], t, closest);
      if ( t < tMin[i] )
        {
        tMin[i] = t;
        }
      if ( t > tMax[i] )
        {
        tMax[i] = t;
        }
      }
    }//for all points

  for (i=0; i < 3; i++)
    {
    corner[i] = mean[i] + tMin[0]*max[i] + tMin[1]*mid[i] + tMin[2]*min[i];

    max[i] = (tMax[0] - tMin[0]) * max[i];
    mid[i] = (tMax[1] - tMin[1]) * mid[i];
    min[i] = (tMax[2] - tMin[2]) * min[i];
    }
}

// a method to compute the OBB of a dataset without having to go through the 
// Execute method; It does set 
void vtkOBBTree::ComputeOBB(vtkDataSet *input, double corner[3], double max[3],
                            double mid[3], double min[3], double size[3])
{
  vtkIdType numPts, numCells, i;
  vtkIdList *cellList;
  vtkDataSet *origDataSet;

  vtkDebugMacro(<<"Computing OBB");

  if ( input == NULL || (numPts = input->GetNumberOfPoints()) < 1 ||
      (input->GetNumberOfCells()) < 1 )
    {
    vtkErrorMacro(<<"Can't compute OBB - no data available!");
    return;
    }
  numCells = input->GetNumberOfCells();

  // save previous value of DataSet and reset after calling ComputeOBB because
  // computeOBB used this->DataSet internally
  origDataSet = this->DataSet;
  this->DataSet = input;

  // these are other member variables that ComputeOBB requires
  this->OBBCount = 0;
  this->InsertedPoints = new int[numPts];
  for (i=0; i < numPts; i++)
    {
    this->InsertedPoints[i] = 0;
    }
  this->PointsList = vtkPoints::New();
  this->PointsList->Allocate(numPts);

  cellList = vtkIdList::New();
  cellList->Allocate(numCells);
  for (i=0; i < numCells; i++)
    {
    cellList->InsertId(i,i);
    }

  this->ComputeOBB(cellList, corner, max, mid, min, size);

  this->DataSet = origDataSet;
  delete [] this->InsertedPoints;
  this->PointsList->Delete();
  cellList->Delete();
}

// Compute an OBB from the list of cells given. Return the corner point
// and the three axes defining the orientation of the OBB. Also return
// a sorted list of relative "sizes" of axes for comparison purposes.
void vtkOBBTree::ComputeOBB(vtkIdList *cells, double corner[3], double max[3],
                            double mid[3], double min[3], double size[3])
{
  vtkIdType numCells, i, j, cellId, ptId, pId, qId, rId;
  int k, type;
  vtkIdType numPts = 0;
  vtkIdType *ptIds = 0;
  double p[3], q[3], r[3], mean[3], xp[3], *v[3], v0[3], v1[3], v2[3];
  double *a[3], a0[3], a1[3], a2[3];
  double tMin[3], tMax[3], closest[3], t;
  double dp0[3], dp1[3], tri_mass, tot_mass, c[3];
  
  this->OBBCount++;
  this->PointsList->Reset();
  //
  // Compute mean & moments
  //
  
  numCells = cells->GetNumberOfIds();
  mean[0] = mean[1] = mean[2] = 0.0;
  tot_mass = 0.0;
  a[0] = a0; a[1] = a1; a[2] = a2;
  for ( i=0; i<3; i++ )
    {
    a0[i] = a1[i] = a2[i] = 0.0;
    }
  
  for ( i=0; i < numCells; i++ )
    {
    cellId = cells->GetId( i );
    type = this->DataSet->GetCellType( cellId );
    switch (this->DataSet->GetDataObjectType())
      {
      case VTK_POLY_DATA:
        ((vtkPolyData *)this->DataSet)->GetCellPoints( cellId, numPts, ptIds );
        break;
      case VTK_UNSTRUCTURED_GRID:
        ((vtkUnstructuredGrid *)this->DataSet)->GetCellPoints( cellId, numPts, ptIds );
        break;
      default:
        vtkErrorMacro( <<"DataSet " <<  this->DataSet->GetClassName() << 
                       " not supported." );
        break;
      }
    for ( j=0; j<numPts-2; j++ )
      {
      vtkCELLTRIANGLES( ptIds, type, j, pId, qId, rId );
      if ( pId < 0 )
        {
        continue;
        }
      this->DataSet->GetPoint(pId, p);
      this->DataSet->GetPoint(qId, q);
      this->DataSet->GetPoint(rId, r);
      // p, q, and r are the oriented triangle points.
      // Compute the components of the moment of inertia tensor.
      for ( k=0; k<3; k++ )
        {
        // two edge vectors
        dp0[k] = q[k] - p[k];
        dp1[k] = r[k] - p[k];
        // centroid
        c[k] = (p[k] + q[k] + r[k])/3;
        }
      vtkMath::Cross( dp0, dp1, xp );
      tri_mass = 0.5*vtkMath::Norm( xp );
      tot_mass += tri_mass;
      for ( k=0; k<3; k++ ) 
        {
        mean[k] += tri_mass*c[k];
        }
      
      // on-diagonal terms
      a0[0] += tri_mass*(9*c[0]*c[0] + p[0]*p[0] + q[0]*q[0] + r[0]*r[0])/12;
      a1[1] += tri_mass*(9*c[1]*c[1] + p[1]*p[1] + q[1]*q[1] + r[1]*r[1])/12;
      a2[2] += tri_mass*(9*c[2]*c[2] + p[2]*p[2] + q[2]*q[2] + r[2]*r[2])/12;
      
      // off-diagonal terms
      a0[1] += tri_mass*(9*c[0]*c[1] + p[0]*p[1] + q[0]*q[1] + r[0]*r[1])/12;
      a0[2] += tri_mass*(9*c[0]*c[2] + p[0]*p[2] + q[0]*q[2] + r[0]*r[2])/12;
      a1[2] += tri_mass*(9*c[1]*c[2] + p[1]*p[2] + q[1]*q[2] + r[1]*r[2])/12;
      } // end foreach triangle

    // While computing cell moments, gather all the cell's
    // point coordinates into a single list.
    //
    for ( j=0; j < numPts; j++ )
      {
      if ( this->InsertedPoints[ptIds[j]] != this->OBBCount )
        {
        this->InsertedPoints[ptIds[j]] = this->OBBCount;
        this->PointsList->InsertNextPoint(this->DataSet->GetPoint(ptIds[j]));
        }
      }//for all points of this cell
    } // end foreach cell

  
  // normalize data
  for ( i=0; i<3; i++ )
    {
    mean[i] = mean[i]/tot_mass;
    }
  
  // matrix is symmetric
  a1[0] = a0[1];
  a2[0] = a0[2];
  a2[1] = a1[2];
  
  // get covariance from moments
  for ( i=0; i<3; i++ )
    {
    for ( j=0; j<3; j++ )
      {
      a[i][j] = a[i][j]/tot_mass - mean[i]*mean[j];
      }
    }
    
    //
    // Extract axes (i.e., eigenvectors) from covariance matrix. 
    //
    v[0] = v0; v[1] = v1; v[2] = v2; 
    vtkMath::Jacobi(a,size,v);
    max[0] = v[0][0]; max[1] = v[1][0]; max[2] = v[2][0];
    mid[0] = v[0][1]; mid[1] = v[1][1]; mid[2] = v[2][1];
    min[0] = v[0][2]; min[1] = v[1][2]; min[2] = v[2][2];
    
    for (i=0; i < 3; i++)
      {
      a[0][i] = mean[i] + max[i];
      a[1][i] = mean[i] + mid[i];
      a[2][i] = mean[i] + min[i];
      }
    
    //
    // Create oriented bounding box by projecting points onto eigenvectors.
    //
    tMin[0] = tMin[1] = tMin[2] = VTK_DOUBLE_MAX;
    tMax[0] = tMax[1] = tMax[2] = -VTK_DOUBLE_MAX;
    
    numPts = this->PointsList->GetNumberOfPoints();
    for (ptId=0; ptId < numPts; ptId++ )
      {
      this->PointsList->GetPoint(ptId, p);
      for (i=0; i < 3; i++)
        {
        vtkLine::DistanceToLine(p, mean, a[i], t, closest);
        if ( t < tMin[i] ) 
          {
          tMin[i] = t;
          }
        if ( t > tMax[i] ) 
          {
          tMax[i] = t;
          }
        }
      }//for all points
    
    for (i=0; i < 3; i++)
      {
      corner[i] = mean[i] + tMin[0]*max[i] + tMin[1]*mid[i] + tMin[2]*min[i];
      
      max[i] = (tMax[0] - tMin[0]) * max[i];
      mid[i] = (tMax[1] - tMin[1]) * mid[i];
      min[i] = (tMax[2] - tMin[2]) * min[i];
      }
}

// Efficient check for whether a line p1,p2 intersects with triangle
// pt1,pt2,pt3 to within specified tolerance.  This is included here
// because vtkTriangle doesn't have an equivalently efficient method.

// The intersection point is returned, along with the parametric
// coordinate t and the sense of the intersection (+1 if entering
// or -1 if exiting, according to normal of triangle)

// The function return value is 1 if an intersection was found.

static inline
int vtkOBBTreeLineIntersectsTriangle(double p1[3], double p2[3],
                                     double pt1[3], double pt2[3], double pt3[3],
                                     double tolerance, double point[3], 
                                     double &t, int &sense)
{
  double normal[3];
  vtkTriangle::ComputeNormal(pt1, pt2, pt3, normal);

  // vector from p1 to p2
  double v12[3];
  v12[0] = p2[0] - p1[0];
  v12[1] = p2[1] - p1[1];
  v12[2] = p2[2] - p1[2];

  // vector from p1 to triangle
  double v1t[3];
  v1t[0] = pt1[0] - p1[0];
  v1t[1] = pt1[1] - p1[1];
  v1t[2] = pt1[2] - p1[2];

  // compute numerator/denominator of parametric distance
  double numerator = vtkMath::Dot(normal, v1t);
  double denominator = vtkMath::Dot(normal, v12);
  if (denominator == 0)
    {
    return 0;
    }

  // If denominator less than the tolerance, then the
  // line and plane are considered parallel. 
  double fabsden = denominator;
  sense = -1;
  if (fabsden < 0.0)
    {
    sense = 1;
    fabsden = -fabsden;
    }
  if (fabsden > 1e-6 + tolerance)
    {
    // calculate the distance to the intersection along the line 
    t = numerator/denominator;
    if (t < 0.0  ||  t > 1.0)
      {
      return 0;
      }

    // intersection point
    point[0] = p1[0] + t*v12[0];
    point[1] = p1[1] + t*v12[1];
    point[2] = p1[2] + t*v12[2];

    // find axis permutation to allow us to do the rest of the
    // math in 2D (much more efficient than doing the math in 3D)
    int xi = 0, yi = 1, zi = 2;
    if (normal[0]*normal[0] < normal[1]*normal[1])
      {
      xi = 1; yi = 2; zi = 0;
      }
    if (normal[xi]*normal[xi] < normal[2]*normal[2])
      {
      xi = 2; yi = 0; zi = 1;
      }

    // calculate vector from triangle corner to point
    double u0 = point[yi] - pt1[yi];
    double v0 = point[zi] - pt1[zi];
    // calculate edge vectors for triangle
    double u1 = pt2[yi] - pt1[yi];
    double v1 = pt2[zi] - pt1[zi];
    double u2 = pt3[yi] - pt1[yi];
    double v2 = pt3[zi] - pt1[zi];

    // area of projected triangle (multiplied by 2) via cross product
    double area = (v2*u1 - u2*v1);

    // sub-areas that must sum to less than the total area
    double alpha = (v2*u0 - u2*v0);
    double beta = (v0*u1 - u0*v1);
    double gamma = area - alpha - beta;

    if (area < 0)
      {
      area = -area;
      alpha = -alpha;
      beta = -beta;
      gamma = -gamma;
      }

    if (alpha > 0  &&  beta > 0  &&  gamma > 0)
      { // inside of polygon
      return 1;
      }
    }

  // if zero tolerance, nothing more that we can do!
  if (tolerance == 0)
    {
    return 0;
    }

  // check the edges of the triangle (because triangles share edges,
  // this check should be identical for adjacent triangles which is
  // a 'good thing'
  double tolsquared = tolerance*tolerance;

  // make sure that order of points in each line segment is the
  // same for faces pointed in opposite directions
  double *tpoints[4];
  if (sense > 0)
    {
    tpoints[0] = pt1;
    tpoints[1] = pt2;
    tpoints[2] = pt3;
    tpoints[3] = pt1;
    }
  else
    {
    tpoints[0] = pt3;
    tpoints[1] = pt2;
    tpoints[2] = pt1;
    tpoints[3] = pt3;
    }
  
  double vec[3];
  double v;
  for (int i = 0; i < 3; i++)
    {
    pt1 = tpoints[i];
    pt2 = tpoints[i+1];

    if (vtkLine::Intersection(p1,p2, pt1,pt2, t,v) == 2)
      {
      vec[0] = (p1[0] + v12[0]*t) - (pt1[0] + (pt2[0] - pt1[0])*v);
      vec[1] = (p1[1] + v12[1]*t) - (pt1[1] + (pt2[1] - pt1[1])*v);
      vec[2] = (p1[2] + v12[2]*t) - (pt1[2] + (pt2[2] - pt1[2])*v);

      if (vtkMath::Dot(vec,vec) < tolsquared)
        {
        return 1;
        }
      }
    }

  return 0;
}

// just check whether a point lies inside or outside the DataSet,
// assuming that the data is a closed vtkPolyData surface.
int vtkOBBTree::InsideOrOutside(const double point[3])
{ 
  // no points!  
  // shoot a ray that is guaranteed to hit one of the cells and use
  // that as our inside/outside check
  vtkIdType numCells = this->DataSet->GetNumberOfCells();
  for (vtkIdType i = 0; i < numCells; i++)
    {
    vtkIdType numPts;
    vtkIdType *ptIds;
    int cellType = this->DataSet->GetCellType(i);
    ((vtkPolyData *)this->DataSet)->GetCellPoints(i, numPts, ptIds);

    // break the cell into triangles
    for (vtkIdType j = 0; j < numPts-2; j++)
      {
      vtkIdType pt1Id, pt2Id, pt3Id;
      vtkCELLTRIANGLES(ptIds, cellType, j, pt1Id, pt2Id, pt3Id);
      if (pt1Id < 0)
        { // cell wasn't a polygon, triangle, quad, or triangle strip
        continue;
        }
      // create a point that is guaranteed to be inside the cell
      double pt1[3], pt2[3], pt3[3];
      this->DataSet->GetPoint(pt1Id, pt1);
      this->DataSet->GetPoint(pt2Id, pt2);
      this->DataSet->GetPoint(pt3Id, pt3);

      double x[3];
      x[0] = (pt1[0] + pt2[0] + pt3[0])/3;
      x[1] = (pt1[1] + pt2[1] + pt3[1])/3;
      x[2] = (pt1[2] + pt2[2] + pt3[2])/3;
      // make a line guaranteed to pass through the cell's first triangle
      x[0] += x[0] - point[0];
      x[1] += x[1] - point[1];
      x[2] += x[2] - point[2];

      // calculate vector
      double v12[3];
      v12[0] = x[0] - point[0];
      v12[1] = x[1] - point[1];
      v12[2] = x[2] - point[2];

      // get triangle normal, we need a triangle for whose face is
      // not parallel to the line
      double normal[3];
      vtkTriangle::ComputeNormal(pt1, pt2, pt3, normal);
      double dotProd = vtkMath::Dot(normal, v12);
      if (dotProd < 0)
        {
        dotProd = -dotProd;
        }
      if (dotProd >= this->Tolerance + 1e-6)
        {
        return this->IntersectWithLine(point, x, NULL, NULL);
        }
      // otherwise go on to next triangle
      }
    }
  return 0;
}


// Take the passed line segment and intersect it with the OBB cells.
// This method assumes that the data set is a vtkPolyData that describes
// a closed surface, and the intersection points that are returned in
// 'points' alternate between entrance points and exit points.
// The return value of the function is 0 if no intersection was found,
// 1 if point 'p1' lies inside the polydata surface, or -1 if point 'p1'
// lies outside the polydata surface.
int vtkOBBTree::IntersectWithLine(const double p1[3], const double p2[3],
                                  vtkPoints *points, vtkIdList *cellIds)
{
  if (this->DataSet == NULL)
    {
    if (points)
      {
      points->SetNumberOfPoints(0);
      }
    if (cellIds)
      {
      cellIds->SetNumberOfIds(0);
      }
    return 0;
    }
  if (!this->DataSet->IsA("vtkPolyData"))
    {
    vtkErrorMacro("IntersectWithLine: this method requires a vtkPolyData");
    return 0;
    }

  int rval = 0;  // return value for function
  vtkIdList *cells;

  // temporary list used to sort intersections
  int listSize = 0;
  int listMaxSize = 10;
  double *distanceList = new double[listMaxSize];
  vtkIdType *cellList = new vtkIdType[listMaxSize];
  char *senseList = new char[listMaxSize];

  double point[3];
  double distance = 0;
  int sense = 0;
  vtkIdType cellId;

  // compute line vector from p1 to p2
  double v12[3];
  v12[0] = p2[0] - p1[0];
  v12[1] = p2[1] - p1[1];
  v12[2] = p2[2] - p1[2];

  vtkOBBNode **OBBstack = new vtkOBBNode *[this->GetLevel()+1];
  OBBstack[0] = this->Tree;

  // depth counter for stack
  int depth = 1;
  while(depth > 0)
    { // simulate recursion without the overhead or limitations
    vtkOBBNode *node = OBBstack[--depth];

    // check for intersection with node
    if (this->LineIntersectsNode(node, (double *)p1, (double *)p2))
      { 
      if (node->Kids == NULL)
        { // then this is a leaf node...get Cells
        cells = node->Cells;
        vtkIdType numCells = cells->GetNumberOfIds();
        for (vtkIdType i = 0; i < numCells; i++)
          {
          // get the current cell
          cellId = cells->GetId(i);
          int cellType = this->DataSet->GetCellType(cellId);
          vtkIdType numPts;
          vtkIdType *ptIds;
          ((vtkPolyData *)this->DataSet)->GetCellPoints(cellId, numPts, ptIds);

          // break the cell into triangles
          for (vtkIdType j = 0; j < numPts-2; j++)
            {
            vtkIdType pt1Id, pt2Id, pt3Id;
            vtkCELLTRIANGLES(ptIds, cellType, j, pt1Id, pt2Id, pt3Id);
            if (pt1Id < 0)
              { // cell wasn't a polygon, triangle, quad, or triangle strip
              continue;
              }

            // get the points for this triangle
            double pt1[3], pt2[3], pt3[3];
            this->DataSet->GetPoint(pt1Id, pt1);
            this->DataSet->GetPoint(pt2Id, pt2);
            this->DataSet->GetPoint(pt3Id, pt3);

            if (vtkOBBTreeLineIntersectsTriangle((double *)p1, (double *)p2,
                                                 pt1, pt2, pt3,
                                                 this->Tolerance, point, 
                                                 distance, sense) <= 0)
              { // no intersection with triangle
              continue;
              }
            
            // we made it! we have a hit!

            if (listSize >= listMaxSize)
              { // have to grow the distanceList
              listMaxSize *= 2;
              double *tmpDistanceList = new double[listMaxSize];
              vtkIdType *tmpCellList = new vtkIdType[listMaxSize];
              char *tmpSenseList = new char[listMaxSize];
              for (int k = 0; k < listSize; k++)
                {
                tmpDistanceList[k] = distanceList[k];
                tmpCellList[k] = cellList[k];
                tmpSenseList[k] = senseList[k];
                }
              delete [] distanceList;
              distanceList = tmpDistanceList;
              delete [] cellList;
              cellList = tmpCellList;
              delete [] senseList;
              senseList = tmpSenseList;
              }
            // store in the distanceList
            distanceList[listSize] = distance;
            cellList[listSize] = cellId;
            senseList[listSize++] = sense;

            // if cell is planar (i.e. not a triangle strip) then proceed
            // immediately to the next cell, otherwise go to next triangle
            if (cellType != VTK_TRIANGLE_STRIP)
              {
              break;
              }
            }
          }
        }
      else
        { // push kids onto stack
        OBBstack[depth] = node->Kids[0];
        OBBstack[depth+1] = node->Kids[1];
        depth += 2;
        }
      }
    } // end while
  
  if (listSize != 0)
    {
    // Look at the distanceList and return the intersection point
    // sorted according to their distance from p1.

    if (points)
      {
      points->SetNumberOfPoints(listSize);
      }
    if (cellIds)
      {
      cellIds->SetNumberOfIds(0);
      }
    double ptol = this->Tolerance/sqrt(vtkMath::Dot(v12,v12));
    double lastDistance = 0.0;
    int lastSense = 0;
    int nPoints = 0;
    int listRemainder = listSize;
    while (listRemainder)
      {
      int minIdx = 0;
      for (int j = 1; j < listRemainder; j++)
        { // check for closest intersection of the correct sense
        if (senseList[j] != lastSense &&
            distanceList[j] < distanceList[minIdx])
          {
          minIdx = j;
          }
        }

      distance = distanceList[minIdx];
      cellId = cellList[minIdx];
      sense = senseList[minIdx];
      listRemainder--;
      distanceList[minIdx] = distanceList[listRemainder];
      cellList[minIdx] = cellList[listRemainder];
      senseList[minIdx] = senseList[listRemainder];

      // only use point if it moves us forward, 
      // or it moves us backward by less than tol
      if (distance > lastDistance - ptol  &&  sense != lastSense)
        { 
        if (points)
          {
          point[0] = p1[0] + distance*v12[0];
          point[1] = p1[1] + distance*v12[1];
          point[2] = p1[2] + distance*v12[2];
          points->SetPoint(nPoints, point);
          }
        if (cellIds)
          {
          cellIds->InsertNextId(cellId);
          }
        nPoints++;

        // set return value according to sense of first intersection
        if (rval == 0)
          {
          rval = sense;
          }
        // remember the last point
        lastDistance = distance;
        lastSense = sense;
        }
      }
    // shrink points array if not all points were used
    if (nPoints < listSize)
      {
      if (points)
        {
        points->GetData()->Resize(nPoints);
        }
      }
    // done!
    }
  else
    {
    if (points)
      {
      points->SetNumberOfPoints(0);
      }
    if (cellIds)
      {
      cellIds->SetNumberOfIds(0);
      }
    }

  delete [] senseList;
  delete [] cellList;
  delete [] distanceList;
  delete [] OBBstack;
  // return 1 if p1 is inside, 0 is p1 is outside
  return rval;
}

// Return intersection point of line defined by two points (a0,a1) in dataset
// coordinate system; returning cellId (or -1 if no intersection). The 
// argument list returns the intersection parametric coordinate, t, along 
// the line; the coordinate of intersection, x[3]; the cell parametric
// coordinates, pcoords[3]; and subId of the cell. (Not yet implemented.)
int vtkOBBTree::IntersectWithLine(double a0[3], double a1[3], double tol,
                                  double& t, double x[3], double pcoords[3],
                                  int &subId)
{
  vtkIdType cellId = -1;

  return this->IntersectWithLine( a0, a1, tol, t, x, pcoords,
                                  subId, cellId );
}

// Return intersection point of line defined by two points (a0,a1) in dataset
// coordinate system; returning cellId (or -1 if no intersection). The 
// argument list returns the intersection parametric coordinate, t, along 
// the line; the coordinate of intersection, x[3]; the cell parametric
// coordinates, pcoords[3]; and subId of the cell. (Not yet implemented.)
int vtkOBBTree::IntersectWithLine(double a0[3], double a1[3], double tol,
                                  double& t, double x[3], double pcoords[3],
                                  int &subId, vtkIdType &cellId)
{
  vtkGenericCell *cell=vtkGenericCell::New();
  int returnVal;

  returnVal = this->IntersectWithLine( a0, a1, tol, t, x, pcoords, subId,
                                       cellId, cell);

  cell->Delete();
  return returnVal;
}

// Return intersection point (if any) AND the cell which was intersected by
// finite line
int vtkOBBTree::IntersectWithLine(double a0[3], double a1[3], double tol,
                                      double& t, double x[3], double pcoords[3],
                                      int &subId, vtkIdType &cellId,
                                      vtkGenericCell *cell)
{
  vtkOBBNode **OBBstack, *node;
  vtkIdList *cells;
  int depth, ii, foundIntersection = 0, bestIntersection = 0;
  double tBest = VTK_DOUBLE_MAX, xBest[3], pcoordsBest[3];
  int subIdBest = -1;
  vtkIdType thisId, cellIdBest = -1;
  
  OBBstack = new vtkOBBNode *[this->GetLevel()+1];
  OBBstack[0] = this->Tree;
  depth = 1;
  while( depth > 0 )
    { // simulate recursion without the overhead or limitations
    depth--;
    node = OBBstack[depth];
    if ( this->LineIntersectsNode( node, a0, a1 ) )
      {
      if ( node->Kids == NULL )
        { // then this is a leaf node...get Cells
        cells = node->Cells;
        for ( ii=0; ii<cells->GetNumberOfIds(); ii++ )
          {
          thisId = cells->GetId(ii);
          this->DataSet->GetCell( thisId, cell);
          if ( cell->IntersectWithLine( a0, a1, tol, t, x,
                                        pcoords, subId ) )
            { // line intersects cell, but is it the best one?
            foundIntersection++;
            if ( t < tBest )
              { // Yes, it's the best.
              bestIntersection = foundIntersection;
              tBest = t;
              xBest[0] = x[0]; xBest[1] = x[1]; xBest[2] = x[2];
              pcoordsBest[0] = pcoords[0]; pcoordsBest[1] = pcoords[1];
              pcoordsBest[2] = pcoords[2];
              subIdBest = subId;
              cellIdBest = thisId;
              }
            }
          }
        }
      else
        { // push kids onto stack
        OBBstack[depth] = node->Kids[0];
        OBBstack[depth+1] = node->Kids[1];
        depth += 2;
        }
      }
    } // end while

  if ( foundIntersection != bestIntersection )
    {
    t = tBest;
    x[0] = xBest[0]; x[1] = xBest[1]; x[2] = xBest[2];
    pcoords[0] = pcoordsBest[0]; pcoords[1] = pcoordsBest[1];
    pcoords[2] = pcoordsBest[2];
    subId= subIdBest ;
    }

  delete [] OBBstack;

  if ( cellIdBest < 0 )
    {
    return 0;
    }
  else
    {
    cellId = cellIdBest;
    return 1;
    }
}

void vtkOBBNode::DebugPrintTree( int level, double *leaf_vol,
                                 int *minCells, int *maxCells )
  {
  double xp[3], volume, c[3];
  int i;
  vtkIdType nCells;

  if ( this->Cells != NULL )
    {
    nCells = this->Cells->GetNumberOfIds();
    }
  else
    {
    nCells = 0;
    }
  
  vtkMath::Cross( this->Axes[0], this->Axes[1], xp );
  volume = fabs( vtkMath::Dot( xp, this->Axes[2] ) );
  for ( i=0; i<3; i++ )
    {
    c[i] = this->Corner[i] + 0.5*this->Axes[0][i] + 0.5*this->Axes[1][i]
      + 0.5*this->Axes[2][i];
    }
  
  for ( i=0; i<level; i++ )
    {
    cout<<"  ";
    }
  cout <<level<<" # Cells: "<<nCells<<", Volume: "<<volume<<"\n";
  for ( i=0; i<level; i++ )
    {
    cout<<"  ";
    }
  cout << "    " << vtkMath::Norm( this->Axes[0] ) << " X " <<
                    vtkMath::Norm( this->Axes[1] ) << " X " <<
                    vtkMath::Norm( this->Axes[2] ) << "\n";
  for ( i=0; i<level; i++ )
    {
    cout<<"  ";
    }
  cout << "    Center: " << c[0] << " " << c[1] << " " << c[2] << "\n";
  if ( nCells != 0 )
    {
    *leaf_vol += volume;
    if ( nCells < *minCells )
      {
      *minCells = nCells;
      }
    if ( nCells > *maxCells )
      {
      *maxCells = nCells;
      }
    }
  if ( this->Kids != NULL )
    {
    this->Kids[0]->DebugPrintTree( level+1, leaf_vol, minCells, maxCells );
    this->Kids[1]->DebugPrintTree( level+1, leaf_vol, minCells, maxCells );
    }
  }

//
//  Method to form subdivision of space based on the cells provided and
//  subject to the constraints of levels and NumberOfCellsInOctant.
//  The result is directly addressable and of uniform subdivision.
//
void vtkOBBTree::BuildLocator()
{
  vtkIdType numPts, numCells, i;
  vtkIdList *cellList;

  vtkDebugMacro(<<"Building OBB tree");
  if ( (this->Tree != NULL) && (this->BuildTime > this->MTime)
       && (this->BuildTime > this->DataSet->GetMTime()) )
    {
    return;
    }

  numPts = this->DataSet->GetNumberOfPoints();
  numCells = this->DataSet->GetNumberOfCells();
  if ( this->DataSet == NULL || numPts < 1 || numCells < 1 )
    {
    vtkErrorMacro(<<"Can't build OBB tree - no data available!");
    return;
    }

  this->OBBCount = 0;
  this->InsertedPoints = new int[numPts];
  for (i=0; i < numPts; i++)
    {
    this->InsertedPoints[i] = 0;
    }
  this->PointsList = vtkPoints::New();
  this->PointsList->Allocate(numPts);

  //
  // Begin recursively creating OBB's
  //
  cellList = vtkIdList::New();
  cellList->Allocate(numCells);
  for (i=0; i < numCells; i++)
    {
    cellList->InsertId(i,i);
    }

  if ( this->Tree )
    {
    this->DeleteTree(this->Tree);
    delete this->Tree;
    }
  this->Tree = new vtkOBBNode;
  this->DeepestLevel = 0;
  this->BuildTree(cellList,this->Tree,0);
  this->Level = this->DeepestLevel;

  vtkDebugMacro(<<"# Cells: " << numCells << ", Deepest tree level: " <<
                this->DeepestLevel <<", Created: " << this->OBBCount << " OBB nodes");
  if ( this->GetDebug() > 1 )
    { // print tree
    double volume = 0.0;
    int minCells = 65535, maxCells = 0;
    this->Tree->DebugPrintTree( 0, &volume, &minCells, &maxCells );
    cout<<"Total leafnode volume = "<<volume<<"\n";
    cout<<"Min leaf cells: "<<minCells<<", Max leaf cells: "
           <<maxCells<<"\n";
    cout.flush();
    }

  //
  // Clean up
  //
  delete [] this->InsertedPoints;
  this->PointsList->Delete();

  this->BuildTime.Modified();
}

// NOTE: for better memory usage this recursive method
// frees its first argument
void vtkOBBTree::BuildTree(vtkIdList *cells, vtkOBBNode *OBBptr, int level)
{
  vtkIdType i, j, numCells=cells->GetNumberOfIds();
  vtkIdType cellId;
  int ptId;
  vtkIdList *cellPts = vtkIdList::New();
  double size[3];

  if ( level > this->DeepestLevel )
    {
    this->DeepestLevel = level;
    }
  //
  // Now compute the OBB
  //
  this->ComputeOBB(cells, OBBptr->Corner, OBBptr->Axes[0], 
                   OBBptr->Axes[1], OBBptr->Axes[2], size);

  //
  // Check whether to continue recursing; if so, create two children and
  // assign cells to appropriate child.
  //
  if ( level < this->MaxLevel && numCells > this->NumberOfCellsPerBucket )
    {
    vtkIdList *LHlist = vtkIdList::New();
    LHlist->Allocate(cells->GetNumberOfIds()/2);
    vtkIdList *RHlist = vtkIdList::New();
    RHlist->Allocate(cells->GetNumberOfIds()/2);
    double n[3], p[3], c[3], x[3], val, ratio, bestRatio;
    int negative, positive, splitAcceptable, splitPlane;
    int foundBestSplit, bestPlane=0, numPts;
    int numInLHnode, numInRHnode;

    //loop over three split planes to find acceptable one
    for (i=0; i < 3; i++) //compute split point
      {
      p[i] = OBBptr->Corner[i] + OBBptr->Axes[0][i]/2.0 + 
             OBBptr->Axes[1][i]/2.0 + OBBptr->Axes[2][i]/2.0;
      }

    bestRatio = 1.0; // worst case ratio
    foundBestSplit = 0;
    for (splitPlane=0,splitAcceptable=0; !splitAcceptable && splitPlane < 3; )
      {
      // compute split normal
      for (i=0 ; i < 3; i++)
        {
        n[i] = OBBptr->Axes[splitPlane][i];
        }
      vtkMath::Normalize(n);

      //traverse cells, assigning to appropriate child list as necessary
      for ( i=0; i < numCells; i++ )
        {
        cellId = cells->GetId(i);
        this->DataSet->GetCellPoints(cellId, cellPts);
        c[0] = c[1] = c[2] = 0.0;
        numPts = cellPts->GetNumberOfIds();
        for ( negative=positive=j=0; j < numPts; j++ )
          {
          ptId = cellPts->GetId(j);
          this->DataSet->GetPoint(ptId, x);
          val = n[0]*(x[0]-p[0]) + n[1]*(x[1]-p[1]) + n[2]*(x[2]-p[2]);
          c[0] += x[0];
          c[1] += x[1];
          c[2] += x[2];
          if ( val < 0.0 ) 
            {
            negative = 1;
            }
          else 
            {
            positive = 1;
            }
          }

        if ( negative && positive )
          { // Use centroid to decide straddle cases
          c[0] /= numPts;
          c[1] /= numPts;
          c[2] /= numPts;
          if ( n[0]*(c[0]-p[0])+n[1]*(c[1]-p[1])+n[2]*(c[2]-p[2]) < 0.0 )
            {
            LHlist->InsertNextId(cellId);
            }
          else
            {
            RHlist->InsertNextId(cellId);
            }
          }
        else
          {
          if ( negative )
            {
            LHlist->InsertNextId(cellId);
            }
          else
            {
            RHlist->InsertNextId(cellId);
            }
          }
        }//for all cells

      //evaluate this split
      numInLHnode = LHlist->GetNumberOfIds();
      numInRHnode = RHlist->GetNumberOfIds();
      ratio = fabs(((double)numInRHnode-numInLHnode)/numCells);

      //see whether we've found acceptable split plane       
      if ( ratio < 0.6 || foundBestSplit ) //accept right off the bat
        { 
        splitAcceptable = 1;
        }
      else
        { //not a great split try another
        LHlist->Reset();
        RHlist->Reset();
        if ( ratio < bestRatio )
          {
          bestRatio = ratio;
          bestPlane = splitPlane;
          }
        if ( ++splitPlane == 3 && bestRatio < 0.95 )
          { //at closing time, even the ugly ones look good
          splitPlane = bestPlane;
          foundBestSplit = 1;
          }
        } //try another split

      }//for each split

    if ( splitAcceptable ) //otherwise recursion terminates
      {
      vtkOBBNode *LHnode= new vtkOBBNode;
      vtkOBBNode *RHnode= new vtkOBBNode;
      OBBptr->Kids = new vtkOBBNode *[2];
      OBBptr->Kids[0] = LHnode;
      OBBptr->Kids[1] = RHnode;
      LHnode->Parent = OBBptr;
      RHnode->Parent = OBBptr;

      cells->Delete(); cells = NULL; //don't need to keep anymore
      this->BuildTree(LHlist, LHnode, level+1);
      this->BuildTree(RHlist, RHnode, level+1);
      }
    else
      {
      // free up local objects
      LHlist->Delete();
      RHlist->Delete();
      }
    }//if should build tree

  if ( cells && this->RetainCellLists ) 
    {
    cells->Squeeze();
    OBBptr->Cells = cells;
    }
  else if ( cells )
    {
    cells->Delete();
    }
  cellPts->Delete();
}

// Create polygonal representation for OBB tree at specified level. If 
// level < 0, then the leaf OBB nodes will be gathered. The aspect ratio (ar)
// and line diameter (d) are used to control the building of the 
// representation. If a OBB node edge ratio's are greater than ar, then the
// dimension of the OBB is collapsed (OBB->plane->line). A "line" OBB will be
// represented either as two crossed polygons, or as a line, depending on
// the relative diameter of the OBB compared to the diameter (d).

void vtkOBBTree::GenerateRepresentation(int level, vtkPolyData *pd)
{
  vtkPoints *pts;
  vtkCellArray *polys;

  if ( this->Tree == NULL )
    {
    vtkErrorMacro(<<"No tree to generate representation from");
    return;
    }

  pts = vtkPoints::New();
  pts->Allocate(5000);
  polys = vtkCellArray::New();
  polys->Allocate(10000);
  this->GeneratePolygons(this->Tree,0,level,pts,polys);

  pd->SetPoints(pts);
  pts->Delete();
  pd->SetPolys(polys);
  polys->Delete();
  pd->Squeeze();
}

void vtkOBBTree::GeneratePolygons(vtkOBBNode *OBBptr, int level, int repLevel,
                                  vtkPoints *pts, vtkCellArray *polys)

{
  if ( level == repLevel || (repLevel < 0 && OBBptr->Kids == NULL) )
    {
    double x[3];
    vtkIdType cubeIds[8];
    vtkIdType ptIds[4];
    
    x[0] = OBBptr->Corner[0];
    x[1] = OBBptr->Corner[1];
    x[2] = OBBptr->Corner[2];
    cubeIds[0] = pts->InsertNextPoint(x);

    x[0] = OBBptr->Corner[0] + OBBptr->Axes[0][0];
    x[1] = OBBptr->Corner[1] + OBBptr->Axes[0][1];
    x[2] = OBBptr->Corner[2] + OBBptr->Axes[0][2];
    cubeIds[1] = pts->InsertNextPoint(x);

    x[0] = OBBptr->Corner[0] + OBBptr->Axes[1][0];
    x[1] = OBBptr->Corner[1] + OBBptr->Axes[1][1];
    x[2] = OBBptr->Corner[2] + OBBptr->Axes[1][2];
    cubeIds[2] = pts->InsertNextPoint(x);

    x[0] = OBBptr->Corner[0] + OBBptr->Axes[0][0] + OBBptr->Axes[1][0];
    x[1] = OBBptr->Corner[1] + OBBptr->Axes[0][1] + OBBptr->Axes[1][1];
    x[2] = OBBptr->Corner[2] + OBBptr->Axes[0][2] + OBBptr->Axes[1][2];
    cubeIds[3] = pts->InsertNextPoint(x);

    x[0] = OBBptr->Corner[0] + OBBptr->Axes[2][0];
    x[1] = OBBptr->Corner[1] + OBBptr->Axes[2][1];
    x[2] = OBBptr->Corner[2] + OBBptr->Axes[2][2];
    cubeIds[4] = pts->InsertNextPoint(x);

    x[0] = OBBptr->Corner[0] + OBBptr->Axes[0][0] + OBBptr->Axes[2][0];
    x[1] = OBBptr->Corner[1] + OBBptr->Axes[0][1] + OBBptr->Axes[2][1];
    x[2] = OBBptr->Corner[2] + OBBptr->Axes[0][2] + OBBptr->Axes[2][2];
    cubeIds[5] = pts->InsertNextPoint(x);

    x[0] = OBBptr->Corner[0] + OBBptr->Axes[1][0] + OBBptr->Axes[2][0];
    x[1] = OBBptr->Corner[1] + OBBptr->Axes[1][1] + OBBptr->Axes[2][1];
    x[2] = OBBptr->Corner[2] + OBBptr->Axes[1][2] + OBBptr->Axes[2][2];
    cubeIds[6] = pts->InsertNextPoint(x);

    x[0] = OBBptr->Corner[0] + OBBptr->Axes[0][0] + OBBptr->Axes[1][0] 
           + OBBptr->Axes[2][0];
    x[1] = OBBptr->Corner[1] + OBBptr->Axes[0][1] + OBBptr->Axes[1][1] 
           + OBBptr->Axes[2][1];
    x[2] = OBBptr->Corner[2] + OBBptr->Axes[0][2] + OBBptr->Axes[1][2] 
           + OBBptr->Axes[2][2];
    cubeIds[7] = pts->InsertNextPoint(x);

    ptIds[0] = cubeIds[0]; ptIds[1] = cubeIds[2]; 
    ptIds[2] = cubeIds[3]; ptIds[3] = cubeIds[1];
    polys->InsertNextCell(4,ptIds);

    ptIds[0] = cubeIds[0]; ptIds[1] = cubeIds[1]; 
    ptIds[2] = cubeIds[5]; ptIds[3] = cubeIds[4];
    polys->InsertNextCell(4,ptIds);

    ptIds[0] = cubeIds[0]; ptIds[1] = cubeIds[4]; 
    ptIds[2] = cubeIds[6]; ptIds[3] = cubeIds[2];
    polys->InsertNextCell(4,ptIds);

    ptIds[0] = cubeIds[1]; ptIds[1] = cubeIds[3]; 
    ptIds[2] = cubeIds[7]; ptIds[3] = cubeIds[5];
    polys->InsertNextCell(4,ptIds);

    ptIds[0] = cubeIds[4]; ptIds[1] = cubeIds[5]; 
    ptIds[2] = cubeIds[7]; ptIds[3] = cubeIds[6];
    polys->InsertNextCell(4,ptIds);

    ptIds[0] = cubeIds[2]; ptIds[1] = cubeIds[6]; 
    ptIds[2] = cubeIds[7]; ptIds[3] = cubeIds[3];
    polys->InsertNextCell(4,ptIds);
    }

  else if ( (level < repLevel || repLevel < 0) && OBBptr->Kids != NULL )
    {
    this->GeneratePolygons(OBBptr->Kids[0],level+1,repLevel,pts,polys);
    this->GeneratePolygons(OBBptr->Kids[1],level+1,repLevel,pts,polys);
    }
}

int vtkOBBTree::DisjointOBBNodes( vtkOBBNode *nodeA,
                                  vtkOBBNode *nodeB,
                                  vtkMatrix4x4 *XformBtoA )
  {
  vtkOBBNode nodeBxformed, *pB, *pA;
  double centerA[3], centerB[3], AtoB[3], in[4], out[4];
  double rangeAmin, rangeAmax, rangeBmin, rangeBmax, dotA, dotB,
         dotAB[3][3];
  double eps;
  int ii, jj, kk;
 
  eps = this->Tolerance;
  pA = nodeA;
  if ( XformBtoA != NULL )
    { // Here we assume that XformBtoA is an orthogonal matrix
    pB = &nodeBxformed;
    in[0] = nodeB->Corner[0]; in[1] = nodeB->Corner[1] ;
    in[2] = nodeB->Corner[2]; in[3] = 1.0;
    XformBtoA->MultiplyPoint( in, out );
    pB->Corner[0] = out[0]/out[3];
    pB->Corner[1] = out[1]/out[3];
    pB->Corner[2] = out[2]/out[3];
    // Clean this up when the bug in MultiplyVectors is fixed!
    for ( ii=0; ii<3; ii++ )
      {
      pB->Axes[0][ii] = nodeB->Corner[ii] + nodeB->Axes[0][ii];
      pB->Axes[1][ii] = nodeB->Corner[ii] + nodeB->Axes[1][ii];
      pB->Axes[2][ii] = nodeB->Corner[ii] + nodeB->Axes[2][ii];
      }
    for ( ii=0; ii<3; ii++ )
      {
      in[0] = pB->Axes[ii][0]; in[1] = pB->Axes[ii][1];
      in[2] = pB->Axes[ii][2]; in[3] = 1.0;
      XformBtoA->MultiplyPoint( in, out );
      pB->Axes[ii][0] = out[0]/out[3];
      pB->Axes[ii][1] = out[1]/out[3];
      pB->Axes[ii][2] = out[2]/out[3];
      }
    for ( ii=0; ii<3; ii++ )
      {
      pB->Axes[0][ii] = pB->Axes[0][ii] - pB->Corner[ii];
      pB->Axes[1][ii] = pB->Axes[1][ii] - pB->Corner[ii];
      pB->Axes[2][ii] = pB->Axes[2][ii] - pB->Corner[ii];
      }
    }
  else
    {
    pB = nodeB;
    }
  for ( ii=0; ii<3; ii++ )
    {
    centerA[ii] = pA->Corner[ii] +
                  0.5*(pA->Axes[0][ii] + pA->Axes[1][ii] + pA->Axes[2][ii]);
    centerB[ii] = pB->Corner[ii] +
                  0.5*(pB->Axes[0][ii] + pB->Axes[1][ii] + pB->Axes[2][ii]);
    AtoB[ii] = centerB[ii] - centerA[ii];
    }

  // Project maximal and minimal corners onto line between centers
  rangeAmin = rangeAmax = vtkMath::Dot( pA->Corner, AtoB );
  rangeBmin = rangeBmax = vtkMath::Dot( pB->Corner, AtoB );
  for ( ii=0; ii<3; ii++ )
    {
    // compute A range
    dotA = vtkMath::Dot( pA->Axes[ii], AtoB );
    if ( dotA > 0 )
      {
      rangeAmax += dotA;
      }
    else
      {
      rangeAmin += dotA;
      }
    
    // compute B range
    dotB = vtkMath::Dot( pB->Axes[ii], AtoB );
    if ( dotB > 0 )
      {
      rangeBmax += dotB;
      }
    else
      {
      rangeBmin += dotB;
      }
    }
  if ( (rangeAmax+eps < rangeBmin) || (rangeBmax+eps < rangeAmin) )
    {
    return( 1 ); // A and B are Disjoint by the 1st test.
    }

  // now check for a separation plane parallel to the faces of B
  for ( ii=0; ii<3; ii++ )
    { // plane is normal to pB->Axes[ii]
    // computing B range is easy...
    rangeBmin = rangeBmax = vtkMath::Dot( pB->Corner, pB->Axes[ii] );
    rangeBmax += vtkMath::Dot( pB->Axes[ii], pB->Axes[ii] );

    // compute A range...
    rangeAmin = rangeAmax = vtkMath::Dot( pA->Corner, pB->Axes[ii] );
    for ( jj=0; jj<3; jj++ )
      {
      // (note: we are saving all 9 dotproducts for future use)
      dotA = dotAB[ii][jj] = vtkMath::Dot( pB->Axes[ii], pA->Axes[jj] );
      if ( dotA > 0 )
        {
        rangeAmax += dotA;
        }
      else
        {
        rangeAmin += dotA;
        }
      }
    if ( (rangeAmax+eps < rangeBmin) || (rangeBmax+eps < rangeAmin) )
      {
      return( 2 ); // A and B are Disjoint by the 3rd test.
      }
    }

  // now check for a separation plane parallel to the faces of A
  for ( ii=0; ii<3; ii++ )
    { // plane is normal to pA->Axes[ii]
    // computing A range is easy...
    rangeAmin = rangeAmax = vtkMath::Dot( pA->Corner, pA->Axes[ii] );
    rangeAmax += vtkMath::Dot( pA->Axes[ii], pA->Axes[ii] );

    // compute B range...
    rangeBmin = rangeBmax = vtkMath::Dot( pB->Corner, pA->Axes[ii] );
    for ( jj=0; jj<3; jj++ )
      {
      // (note: we are using the 9 dotproducts computed earlier)
      dotB = dotAB[jj][ii];
      if ( dotB > 0 )
        {
        rangeBmax += dotB;
        }
      else
        {
        rangeBmin += dotB;
        }
      }
    if ( (rangeAmax+eps < rangeBmin) || (rangeBmax+eps < rangeAmin) )
      {
      return( 3 ); // A and B are Disjoint by the 2nd test.
      }
    }

  // Bad luck: now we must look for a separation plane parallel
  // to one edge from A and one edge from B.
  for ( ii=0; ii<3; ii++ )
    {
    for ( jj=0; jj<3; jj++ )
      {
      // the plane is normal to pA->Axes[ii] X pB->Axes[jj]
      vtkMath::Cross( pA->Axes[ii], pB->Axes[jj], AtoB );
      rangeAmin = rangeAmax = vtkMath::Dot( pA->Corner, AtoB );
      rangeBmin = rangeBmax = vtkMath::Dot( pB->Corner, AtoB );
      for ( kk=0; kk<3; kk++ )
        {
        // compute A range
        dotA = vtkMath::Dot( pA->Axes[kk], AtoB );
        if ( dotA > 0 )
          {
          rangeAmax += dotA;
          }
        else
          {
          rangeAmin += dotA;
          }
    
        // compute B range
        dotB = vtkMath::Dot( pB->Axes[kk], AtoB );
        if ( dotB > 0 )
          {
          rangeBmax += dotB;
          }
        else
          {
          rangeBmin += dotB;
          }
        }
      if ( (rangeAmax+eps < rangeBmin) || (rangeBmax+eps < rangeAmin) )
        {
        return( 4 ); // A and B are Disjoint by the 4th test.
        }
      }
    }
  // if we fall through to here, the OBB's overlap
  return( 0 );
  }

int vtkOBBTree::TriangleIntersectsNode( vtkOBBNode *nodeA,
                                        double p0[3], double p1[3], double p2[3],
                                        vtkMatrix4x4 *XformBtoA )
  {
  vtkOBBNode *pA;
  double p0Xformed[3], p1Xformed[3], p2Xformed[3];
  double *pB[3], in[4], out[4], v0[3], v1[3], AtoB[3], xprod[3];
  double rangeAmin, rangeAmax, rangeBmin, rangeBmax, dotA, dotB;
  double eps;
  int ii, jj, kk;
 
  eps = this->Tolerance;
  pA = nodeA;
  if ( XformBtoA != NULL )
    { // Here we assume that XformBtoA is an orthogonal matrix
    pB[0] = p0Xformed; pB[1] = p1Xformed; pB[2] = p2Xformed;
    for ( ii=0; ii<3; ii++ )
      {
      p0Xformed[ii] = p0[ii];
      p1Xformed[ii] = p1[ii];
      p2Xformed[ii] = p2[ii];
      }
    for ( ii=0; ii<3; ii++ )
      {
      in[0] = pB[ii][0]; in[1] = pB[ii][1] ; in[2] = pB[ii][2]; in[3] = 1.0;
      XformBtoA->MultiplyPoint( in, out );
      pB[ii][0] = out[0]/out[3];
      pB[ii][1] = out[1]/out[3];
      pB[ii][2] = out[2]/out[3];
      }
    }
  else
    {
    pB[0] = p0; pB[1] = p1; pB[2] = p2;
    }

  // now check for a separation plane parallel to the triangle
  for ( ii=0; ii<3; ii++ )
    { // plane is normal to the triangle
    v0[ii] = pB[1][ii] - pB[0][ii];
    v1[ii] = pB[2][ii] - pB[0][ii];
    }
  vtkMath::Cross( v0, v1, xprod );
  // computing B range is easy...
  rangeBmin = rangeBmax = vtkMath::Dot( pB[0], xprod );
  // compute A range...
  rangeAmin = rangeAmax = vtkMath::Dot( pA->Corner, xprod );
  for ( jj=0; jj<3; jj++ )
    {
    dotA = vtkMath::Dot( xprod, pA->Axes[jj] );
    if ( dotA > 0 )
      {
      rangeAmax += dotA;
      }
    else
      {
      rangeAmin += dotA;
      }
    }
  if ( (rangeAmax+eps < rangeBmin) || (rangeBmax+eps < rangeAmin) )
    {
    return( 0 ); // A and B are Disjoint by the 1st test.
    }
  
  // now check for a separation plane parallel to the faces of A
  for ( ii=0; ii<3; ii++ )
    { // plane is normal to pA->Axes[ii]
    // computing A range is easy...
    rangeAmin = rangeAmax = vtkMath::Dot( pA->Corner, pA->Axes[ii] );
    rangeAmax += vtkMath::Dot( pA->Axes[ii], pA->Axes[ii] );

    // compute B range...
    rangeBmin = rangeBmax = vtkMath::Dot( pB[0], pA->Axes[ii] );
    dotB = vtkMath::Dot( pB[1], pA->Axes[ii] );
    if ( dotB > rangeBmax )
      {
      rangeBmax = dotB;
      }
    else
      {
      rangeBmin = dotB;
      }
    
    dotB = vtkMath::Dot( pB[2], pA->Axes[ii] );
    if ( dotB > rangeBmax )
      {
      rangeBmax = dotB;
      }
    else if ( dotB < rangeBmin )
      {
      rangeBmin = dotB;
      }

    if ( (rangeAmax+eps < rangeBmin) || (rangeBmax+eps < rangeAmin) )
      {
      return( 0 ); // A and B are Disjoint by the 2nd test.
      }
    }

  // Bad luck: now we must look for a separation plane parallel
  // to one edge from A and one edge from B.
  for ( ii=0; ii<3; ii++ )
    {
    for ( jj=0; jj<3; jj++ )
      {
      // the plane is normal to pA->Axes[ii] X (pB[jj+1]-pB[jj])
      v0[0] = pB[(jj+1)%3][0] - pB[jj][0];
      v0[1] = pB[(jj+1)%3][1] - pB[jj][1];
      v0[2] = pB[(jj+1)%3][2] - pB[jj][2];
      vtkMath::Cross( pA->Axes[ii], v0, AtoB );
      rangeAmin = rangeAmax = vtkMath::Dot( pA->Corner, AtoB );
      rangeBmin = rangeBmax = vtkMath::Dot( pB[jj], AtoB );
      for ( kk=0; kk<3; kk++ )
        {
        // compute A range
        dotA = vtkMath::Dot( pA->Axes[kk], AtoB );
        if ( dotA > 0 )
          {
          rangeAmax += dotA;
          }
        else
          {
          rangeAmin += dotA;
          }
        }
      // compute B range
      dotB = vtkMath::Dot( pB[(jj+2)%3], AtoB );
      if ( dotB > rangeBmax )
        {
        rangeBmax = dotB;
        }
      else
        {
        rangeBmin = dotB;
        }

      if ( (rangeAmax+eps < rangeBmin) || (rangeBmax+eps < rangeAmin) )
        {
        return( 0 ); // A and B are Disjoint by the 3rd test.
        }
      }
    }
  
  // if we fall through to here, the OBB overlaps the triangle.
  return( 1 );
  }


// check if a line intersects the node: the line doesn't have to actually
// pass all the way through the node, but at least some portion of the line
// must lie within the node.
int vtkOBBTree::LineIntersectsNode( vtkOBBNode *pA,
                                    double b0[3], double b1[3] )
{
  double rangeAmin, rangeAmax, rangeBmin, rangeBmax, dotB;
  double eps;
  int ii;

  for ( ii = 0; ii < 3; ii++ )
    {
    // computing A range is easy...
    rangeAmin = vtkMath::Dot( pA->Corner, pA->Axes[ii] );
    rangeAmax = rangeAmin + vtkMath::Dot( pA->Axes[ii], pA->Axes[ii] );

    // compute B range...
    rangeBmin = vtkMath::Dot( b0, pA->Axes[ii] );
    rangeBmax = rangeBmin;
    dotB = vtkMath::Dot( b1, pA->Axes[ii] );
    if ( dotB < rangeBmin )
      {
      rangeBmin = dotB;
      }
    else
      {
      rangeBmax = dotB;
      }

    eps = this->Tolerance;
    if ( eps != 0 )
      { // avoid sqrt call if tolerance check isn't being done
      eps *= sqrt(rangeAmax - rangeAmin);
      }

    if ( (rangeAmax+eps < rangeBmin) || (rangeBmax+eps < rangeAmin) )
      {
      return ( 0 );
      }
    }

  // if we fall through to here, the OBB overlaps the line segment.
  return ( 1 );
}

// Intersect this OBBTree with OBBTreeB (as transformed) and
// call processing function for each intersecting leaf node pair.
// If the processing function returns a negative integer, terminate.
int vtkOBBTree::IntersectWithOBBTree( vtkOBBTree *OBBTreeB,
                                      vtkMatrix4x4 *XformBtoA,
                                      int(*function)( vtkOBBNode *nodeA,
                                                      vtkOBBNode *nodeB,
                                                      vtkMatrix4x4 *Xform,
                                                      void *arg ),
                                      void *data_arg )
  {
  int maxdepth, mindepth, depth, returnValue = 0, count = 0, maxStackDepth;
  vtkOBBNode **OBBstackA, **OBBstackB, *nodeA, *nodeB;

  // Intersect OBBs and process intersecting leaf nodes.
  maxdepth = this->GetLevel();
  if ( (mindepth = OBBTreeB->GetLevel()) > maxdepth )
    {
    mindepth = maxdepth;
    maxdepth = OBBTreeB->GetLevel();
    }
  // Compute maximum theoretical recursion depth.
  maxStackDepth = 3*mindepth + 2*(maxdepth-mindepth) + 1;

  OBBstackA = new vtkOBBNode *[maxStackDepth];
  OBBstackB = new vtkOBBNode *[maxStackDepth];
  OBBstackA[0] = this->Tree;
  OBBstackB[0] = OBBTreeB->Tree;
  depth = 1;
  while( depth > 0 && returnValue > -1 )
    { // simulate recursion without overhead of real recursion.
    depth--;
    nodeA = OBBstackA[depth];
    nodeB = OBBstackB[depth];
    if ( !this->DisjointOBBNodes( nodeA, nodeB, XformBtoA ) )
      {
      if ( nodeA->Kids == NULL )
        {
        if ( nodeB->Kids == NULL )
          { // then this is a pair of intersecting leaf nodes to process
          returnValue = (*function)( nodeA, nodeB, XformBtoA, data_arg );
          if ( returnValue >= 0 )
            {
            count += returnValue;
            }
          else
            {
            count = returnValue;
            }
          }
        else
          { // A is a leaf, but B goes deeper.
          OBBstackA[depth] = nodeA;
          OBBstackB[depth] = nodeB->Kids[0];
          OBBstackA[depth+1] = nodeA;
          OBBstackB[depth+1] = nodeB->Kids[1];
          depth += 2;
          }
        }
      else
        {
        if ( nodeB->Kids == NULL )
          { // B is a leaf, but A goes deeper.
          OBBstackB[depth] = nodeB;
          OBBstackA[depth] = nodeA->Kids[0];
          OBBstackB[depth+1] = nodeB;
          OBBstackA[depth+1] = nodeA->Kids[1];
          depth += 2;
          }
        else
          { // neither A nor B are leaves. Go to the next level.
          OBBstackA[depth] = nodeA->Kids[0];
          OBBstackB[depth] = nodeB->Kids[0];
          OBBstackA[depth+1] = nodeA->Kids[1];
          OBBstackB[depth+1] = nodeB->Kids[0];
          OBBstackA[depth+2] = nodeA->Kids[0];
          OBBstackB[depth+2] = nodeB->Kids[1];
          OBBstackA[depth+3] = nodeA->Kids[1];
          OBBstackB[depth+3] = nodeB->Kids[1];
          depth += 4;
          }
        }
      }
    }
  // cleanup
  delete OBBstackA;
  delete OBBstackB;

  return( count );
  }

void vtkOBBTree::PrintSelf(ostream& os, vtkIndent indent)
{
  this->Superclass::PrintSelf(os, indent);
  
  if ( this->Tree )
    {
    os << indent << "Tree " << this->Tree << "\n";
    }
  else
    {
    os << indent << "Tree: (null)\n";      
    }
  if ( this->PointsList )
    {
    os << indent << "PointsList " << this->PointsList << "\n";
    }
  else
    {
    os << indent << "PointsList: (null)\n";
    }
  if( this->InsertedPoints )
    {
    os << indent << "InsertedPoints " << this->InsertedPoints << "\n";
    }
  else
    {
    os << indent << "InsertedPoints: (null)\n";      
    }

  os << indent << "OBBCount " << this->OBBCount << "\n";
  os << indent << "DeepestLevel " << this->DeepestLevel << "\n";
}
